Mining of simple sequence repeats in chloroplast genome of a parasitic liverwort: Aneura mirabilis

Aneura mirabilis is a parasitic liverwort with a chloroplast genome size of 108007 bp. In this study simple sequence repeats (SSRs) were detected using bioinformatics approch in plastid genome of Aneura mirabilis. Due to
Aneura mirabilis is a parasitic liverwort with a chloroplast genome size of 108007 bp. In this study simple sequence repeats (SSRs) were detected using bioinformatics approch in plastid genome of Aneura mirabilis. Due to its small genome size only 19 repeats were detected showing a density of 1 SSR/5.68 kb. The length of SSRs ranged from 12 to 20 bp. Mononucleotide repeats were the most frequent repeat type (36.84%) followed by tetranucleotide repeats (31.58%). Moreover hexanucleotide repeats were absent in chloroplast genome sequence of Aneura mirabilis. 
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Metadaten
Author:Asheesh Shanker
URN:urn:nbn:de:hebis:30:3-353287
Parent Title (German):196
Series (Serial Number):Archive for Bryology (196)
Publisher:Universität Bonn, Arbeitsgruppe Bryologie
Place of publication:Bonn
Document Type:Periodical Parts
Language:English
Year of Completion:2013
Year of first Publication:2013
Publishing Institution:Universitätsbibliothek Johann Christian Senckenberg
Release Date:2015/01/12
Tag:genome sequences
Pagenumber:4
HeBIS PPN:366876821
Dewey Decimal Classification:580 Pflanzen (Botanik)
Sammlungen:Sondersammelgebiets-Volltexte
Licence (German):License Logo Veröffentlichungsvertrag für Publikationen

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