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CryoRhodopsins: a comprehensive characterization of a group of microbial rhodopsins from cold environments

  • Microbial rhodopsins are omnipresent on Earth, however the vast majority of them remain uncharacterized. Here we describe a new rhodopsin group from cold-adapted organisms and cold environments, such as glaciers, denoted as CryoRhodopsins (CryoRs). Our data suggest that CryoRs have dual functionality switching between inward transmembrane proton translocation and photosensory activity, both of which can be modulated with UV light. CryoR1 exhibits two subpopulations in the ground state, which upon light activation lead to transient photocurrents of opposing polarities. A distinguishing feature of the group is the presence of a buried arginine residue close to the cytoplasmic face of its members. Combining single-particle cryo-electron microscopy and X-ray crystallography with the rhodopsin activation by lit, we demonstrate that the arginine stabilizes a UV-absorbing intermediate of an extremely slow CryoRhodopsin photocycle. Together with extensive spectroscopic characterization, our investigations on CryoR1 and CryoR2 proteins reveal mechanisms of photoswitching in the newly identified group and demonstrate principles of the adaptation of these rhodopsins to low temperatures.Microbial rhodopsins are omnipresent on Earth, however the vast majority of them remain uncharacterized. Here we describe a new rhodopsin group from cold-adapted organisms and cold environments, such as glaciers, denoted as CryoRhodopsins (CryoRs). Our data suggest that CryoRs have dual functionality switching between inward transmembrane proton translocation and photosensory activity, both of which can be modulated with UV light. CryoR1 exhibits two subpopulations in the ground state, which upon light activation lead to transient photocurrents of opposing polarities. A distinguishing feature of the group is the presence of a buried arginine residue close to the cytoplasmic face of its members. Combining single-particle cryo-electron microscopy and X-ray crystallography with the rhodopsin activation by light, we demonstrate that the arginine stabilizes a UV-absorbing intermediate of an extremely slow CryoRhodopsin photocycle. Together with extensive spectroscopic characterization, our investigations on CryoR1 and CryoR2 proteins reveal mechanisms of photoswitching in the newly identified group and demonstrate principles of the adaptation of these rhodopsins to low temperatures.

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Metadaten
Author:Gerrit H. U. LammORCiD, Egor MarinORCiD, Alexey AlekseevORCiD, Anna V. Schellbach, Artem StetsenkoORCiD, Gleb BourenkovORCiD, Valentin BorshchevskiyORCiDGND, Marvin AsidoORCiDGND, Michael AgtheORCiD, Sylvain EngilbergeORCiD, Samuel L. RoseORCiD, Nicolas CaramelloORCiD, Antoine RoyantORCiD, Thomas R. SchneiderORCiD, Alex BatemanORCiD, Thomas MagerORCiDGND, Tobias MoserORCiD, Josef WachtveitlORCiDGND, Albert GuskovORCiDGND, Kirill KovalevORCiDGND
URN:urn:nbn:de:hebis:30:3-837870
URL:https://www.biorxiv.org/content/10.1101/2024.01.15.575777v2
DOI:https://doi.org/10.1101/2024.01.15.575777
Parent Title (English):bioRxiv
Publisher:bioRxiv
Document Type:Preprint
Language:English
Date of Publication (online):2024/04/10
Date of first Publication:2024/04/10
Publishing Institution:Universitätsbibliothek Johann Christian Senckenberg
Release Date:2024/04/17
Issue:2024.01.15.575777 Version 2
Edition:Version 2
Page Number:66
Institutes:Biochemie, Chemie und Pharmazie / Biochemie und Chemie
Dewey Decimal Classification:5 Naturwissenschaften und Mathematik / 57 Biowissenschaften; Biologie / 570 Biowissenschaften; Biologie
Sammlungen:Universitätspublikationen
Licence (German):License LogoCreative Commons - CC BY-NC-ND - Namensnennung - Nicht kommerziell - Keine Bearbeitungen 4.0 International