Mining of simple sequence repeats in chloroplast genome of a parasitic liverwort: Aneura mirabilis
- Aneura mirabilis is a parasitic liverwort with a chloroplast genome size of 108007 bp. In this study simple sequence repeats (SSRs) were detected using bioinformatics approch in plastid genome of Aneura mirabilis. Due to its small genome size only 19 repeats were detected showing a density of 1 SSR/5.68 kb. The length of SSRs ranged from 12 to 20 bp. Mononucleotide repeats were the most frequent repeat type (36.84%) followed by tetranucleotide repeats (31.58%). Moreover hexanucleotide repeats were absent in chloroplast genome sequence of Aneura mirabilis.
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| Author: | Asheesh Shanker |
|---|---|
| URN: | urn:nbn:de:hebis:30:3-353287 |
| Parent Title (German): | 196 |
| Series (Serial Number): | Archive for Bryology (196) |
| Publisher: | Universität Bonn, Arbeitsgruppe Bryologie |
| Place of publication: | Bonn |
| Document Type: | Part of Periodical |
| Language: | English |
| Year of Completion: | 2013 |
| Year of first Publication: | 2013 |
| Publishing Institution: | Universitätsbibliothek Johann Christian Senckenberg |
| Release Date: | 2015/01/12 |
| Tag: | genome sequences |
| Page Number: | 4 |
| HeBIS-PPN: | 366876821 |
| Dewey Decimal Classification: | 5 Naturwissenschaften und Mathematik / 58 Pflanzen (Botanik) / 580 Pflanzen (Botanik) |
| Sammlungen: | Sammlung Biologie / Sondersammelgebiets-Volltexte |
| Licence (German): |  Deutsches Urheberrecht |
