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Walter Greiner: in memoriam
(2017)
Walter Greiner (29 October 1935 - 6 October 2016) was a German theoretical physicist. His scientific research interests include the thematic areas of atomic physics, heavy ion physics, nuclear physics, elementary particle physics (particularly quantum electrodynamics and quantum chromodynamics). He is most known in Germany for his series of books in theoretical physics, but he is also well known around the world. Greiner was born on October 29, 1935, in Neuenbau, Sonnenberg, Germany. He studied physics at the University of Frankfurt (Goethe University in Frankfurt Am Main), receiving in this institution a BSci in physics and a Master’s degree in 1960 with a thesis on plasma-reactors, and a PhD in 1961 at the University of Freiburg under Hans Marshal, with a thesis on the nuclear polarization in μμ-mesic atoms. During the period of 1962 to 1964 he was assistant professor at the University of Maryland, followed by a position as research associate at the University of Freiburg, in 1964. Starting in 1965, he became a full professor at the Institute for Theoretical Physics at Goethe University until 2003. Greiner has been a visiting professor to many universities and laboratories, including Florida State University, the University of Virginia, the University of California, the University of Melbourne, Vanderbilt University, Yale University, Oak Ridge National Laboratory and Los Alamos National Laboratory. In 2003, with Wolf Singer, he was the founding Director of the Frankfurt Institute for Advanced Studies (FIAS), and gave lectures and seminars in elementary particle physics. He died on October 6, 2016 at the age of 80.
Walter Greiner was an excellent teacher, researcher, friend. And he was a great supporter of the series of events known by the acronyms IWARA - International Workshop on Astronomy and Relativistic Astrophysics, STARS - Caribbean Symposium on Cosmology, Gravitation, Nuclear and Astroparticle Physics, and SMFNS - International Symposium on Strong Electromagnetic Fields and Neutron Stars. Walter Greiner left us. But his memory will remain always alive among us who have had the privilege of knowing him and enjoy his wisdom and joy of living.
To broaden the scope of monetary policy, cash abolishment is often suggested as a means of breaking through the zero lower bound. However, practically nothing is said about the welfare costs of such a proposal. Rösl, Seitz and Tödter argue that the welfare costs of bypassing the zero lower bound can be analyzed analytically and empirically by assuming negative interest rates on cash holdings. They gauge the welfare effects of abolishing cash, both, for the euro area and for Germany.
Their findings suggest that the welfare losses of negative interest rates incurred by money holders are large, notably if implemented in the current low interest rate environment. Imposing a negative interest rate of 3 percentage points on cash holdings and reducing the interest on all assets included in M3 creates a deadweight loss of € 62bn for the euro area and of €18bn for Germany. Therefore, the authors argue that cash abolishment or negative interest rates on cash to break through the zero lower bound at any price can hardly be a meaningful policy goal.
Este trabalho pretende fazer uma síntese da inserção de Axel Honneth no quadro das teorias da justiça. Para isso, se apresenta o debate entre comunitaristas e liberais, juntamente ao procedimentalismo contemporâneo, e as críticas de Honneth a essas posições. Assim o trabalho apresenta o esboço teórico de justiça como reconhecimento em Honneth, realizado com base no conceito de eticidade formal e no método da reconstrução normativa.
Pulsed electron-electron double resonance (PELDOR), also called Double Electron-Electron Resonance, (DEER) is a pulsed EPR technique that can provide structural information of biomolecules, such as proteins or nucleic acids, complementary to other structure determination methods by measuring long distances (from 1.5 up to 10 nm) between two paramagnetic labels. Incorporation of the rigid Ç-label pairwise into DNA or RNA molecules enables the determination not only of the distance but also of the mutual orientation between the two Ç-labels by multi-frequency orientation-selective PELDOR data (X-, Q- and G-band frequencies). Thus, information about the orientation of secondary structure elements of nucleic acids can be revealed and used as additional angular information for structure determination. Since Ç does not have motion independent from the helix where it resides, the conformational flexibility of the nucleic acid molecule can be directly determined. This thesis demonstrates the advancement of PELDOR spectroscopy, beyond its original scope of distance measurements, to determine the mutual orientation between two rigid spin labels towards the characterization of the conformational space sampled by highly flexible nucleic acid molecules. Applications of the methodology are shown on two systems: a three-way junction, namely a cocaine aptamer in its bound-state, and a two-way junction, namely a bent DNA.
More in detail, the conformational changes of the cocaine aptamer upon cocaine binding were investigated by analysis of the distance distributions. The cocaine-bound and the unbound states could be differentiated by their conformational flexibility, which decreases in the presence of the ligand. Moreover, the obtained distance distributions revealed a small change in the mean distance between the two spin labels upon cocaine binding. This indicates a ligand-induced conformational change, which presumably originates at the junction where cocaine is known to bind. The investigation of the relative orientation between the two spin-labeled helices of the aptamer revealed further structural insights into the conformational dynamics of the cocaine-bound state. The angular information from the orientation-selective PELDOR data and the a priori knowledge about the secondary structure of the aptamer were helpful in obtaining a molecular model describing its global folding and flexibility. In spite of a large flexible aptamer, the kink angle between the Ç-labeled helices was found to be rather well-defined.
As for the bent DNA molecule, a two-step protocol was proposed to investigate the conformational flexibility. In the first step, a database with all the possible conformers was created, using available restraints from NMR and distance restraints derived from PELDOR. In a second step, a weighted ensemble of these conformers fitting the multi-frequency PELDOR data was built. The uniqueness of the obtained structural ensemble was checked by validation against an independent PELDOR data set recorded at a higher magnetic field strength. In addition, the kink and twist angle pairs were determined and the resulting structural ensemble was compared with the conformational space deduced both from FRET experiments and from the structure determined by the NMR restraints alone.
Overall, this thesis underlines the potential of using PELDOR spectroscopy combined with rigid spin labels in the context of structure determination of nucleic acids in order to determine the relative orientation between two helices, the conformational flexibility and the conformational changes of nucleic acid molecules upon ligand binding.
Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinase
(2017)
The two isoforms of the Bcr-Abl tyrosine kinase, p210 and p190, are associated with different leukemias and have a dramatically different signaling network, despite similar kinase activity. To provide a molecular rationale for these observations, we study the Dbl-homology (DH) and Pleckstrin-homology (PH) domains of Bcr-Abl p210, which constitute the only structural differences to p190. Here we report high-resolution structures of the DH and PH domains and characterize conformations of the DH–PH unit in solution. Our structural and functional analyses show no evidence that the DH domain acts as a guanine nucleotide exchange factor, whereas the PH domain binds to various phosphatidylinositol-phosphates. PH-domain mutants alter subcellular localization and result in decreased interactions with p210-selective interaction partners. Hence, the PH domain, but not the DH domain, plays an important role in the formation of the differential p210 and p190 Bcr-Abl signaling networks.
Diese Untersuchung beschäftigt sich mit der Morphosyntax pronominaler Partitivanaphern im kontinentalwestgermanischen Dialektkontinuum im Allgemeinen und im deutschen (insbesondere hessischen) Sprachraum im Speziellen. Schwerpunkte sind dabei die sprachgeografische Verteilung, die morphosyntaktische Variation und die strukturelle Analyse pronominaler Ausdrucksmittel der unbestimmten Teilmenge. Es werden traditionell dialektologische Erkenntnisinteressen (Raumstruktur syntaktischer Variablen und Verlauf syntaktischer Isoglossen) mit Fragestellungen der (theoretisch orientierten) Syntaxforschung verbunden. Außerdem erfolgt erstmals eine wirklich sprachübergreifende Behandlung der verschiedenen Systeme pronominaler Partitivität, zum einen innerhalb der (West-)Germania, zum anderen durch den Einbezug (zentral-)romanischer Sprachen, um Unterschiede und Gemeinsamkeiten auf der Mikro- und Mesoebene herauszuarbeiten. Die gewählte Methode ist nicht nur kontrastiv, sondern auch geolinguistisch fundiert, insofern als morphologische Formen und syntaktische Variation im Raum abgebildet werden, wodurch nicht zuletzt auch interessante Korrelationen und Anti-Korrelationen in den Daten bestätigt bzw. entdeckt werden konnten.
Nach einer Gegenstandsbestimmung der morphosyntaktischen Variable und ihrer Varianten (Inventarisierung und Typisierung) sowie des Variationsrahmens (areal-horizontal, vertikal, morphosyntaktisch, historisch, idiolektal etc.) wird zunächst das DFG-Projekt „Syntax hessischer Dialekte“ (SyHD) vorgestellt, das die empirische Basis zur Untersuchung lieferte. Dabei werden generelle und spezifische Fragen der Datengewinnung (multivariate Methode mit indirekten und direkten Elementen) sowie der Datenanalyse und -interpretation (Instrument der Kartierung) diskutiert. Den Hauptteil der Arbeit bildet die diatopische, diachrone und distributionell-syntaktische Variation der Systeme pronominaler Partitivität. Als die vier Hauptstrategien zum Ausdruck partitiv-anaphorischer Referenz innerhalb des deutschsprachigen Gebiets finden sich das konservative System versteinerter Pronominalgenitive wie „(d)(e)r(e)“, „s(e)n“ und „es“ (vor allem in einem mitteldeutschen Streifen und randdialektal) - Relikte eines ehemals umfassenderen genitivbasierten Systems der Partitivität -, das sprachgeschichtlich junge und typologisch auffällige indefinit-partitive Pronomen „welch-“/„we(l)k-“ (im Nieder-/Norddeutschen und in der Standardsprache) sowie schließlich die innovativen Systeme der Null-Anapher (im Alemannischen bzw. Südwesten) und des generalisierten Indefinitpronomens „ein-“ (im Bairischen bzw. Südosten). Wenngleich sich diese areale Distribution im zentral gelegenen und daher unter dem Einfluss nahezu aller Strategien stehenden Hessen als Kleinraum bestätigt - mit Ausnahme der weitgehenden Abwesenheit des „ein“-Systems -, so zeigen sich doch einige überraschende Ergebnisse wie beispielsweise ein kategorialer Unterschied nach Numerus und zum Teil Genus bei der Vitalität der Genitivpartikeln. Sprachhistorisch können zwei Arten von Wandel beim Genitiv-System identifiziert werden: systeminterne Veränderungen (durch Merkmals- oder Formverlust) und systemexterne Verdrängungsprozesse (durch Ausbreitung der innovativen Ausdrucksformen, was in einem Dialekt bzw. intraindividuell zu konkurrierenden oder Mischsystemen führen kann). Darüber hinaus sind mit Blick auf die Art und Weise der Veränderungen für Sprachwandelprozesse allgemein typische zyklische Abfolgen von Abschwächung und Verstärkung erkennbar. In Bezug auf die syntaktische Distribution werden insbesondere die Genitivanaphern auf ihre Kompatibilität mit nominalen Modifikatoren wie Numeralien/(schwachen) Quantoren, „flektierten“ Zahlwörtern (Schwa), Adjektiven, verschiedenen Arten von Präpositionalphrasen sowie Relativ- vs. Komplementsätzen hin untersucht und - funktional wie formal - mit ihrem niederländischen partitiven/quantitativen Äquivalent „er“ sowie den romanischen, in ein partitives System integrierten Pronomina fr. „en“/it. „ne“ verglichen. Für die deutschen Partitivanaphern ergibt sich daraus Evidenz für zwei unterschiedliche Pronominalisierungsebenen. Abschließend wird das Phänomen in die allgemeine Diskussion um nominale Ellipsen eingebettet (Elision und Pronominalisierung). Aufgrund der Evaluation der in der Literatur diskutierten Lizenzierungsansätze anhand neuer dialektaler und typologischer Daten wird hier ein flexions-/kongruenzbasierter Ansatz favorisiert (Rolle von Adjektivmorphologie bzw. generell von unterschiedlichen Flexionssystemen, etwa im Deutschen vs. Englischen).
Molecular detection of Bartonella henselae in 11 Ixodes ricinus ticks extracted from a single cat
(2017)
Background: Bartonella henselae is a highly prevalent, vector-borne pathogen. Transmission to humans and animals by ticks is discussed controversially. Here, we present a case report, where eleven Ixodes ricinus ticks all harbouring B. henselae DNA were removed from one single cat.
Results: The first feeding tick was tested positive for B. henselae DNA. The cat was also found to be seropositive for anti-B. henselae IgG antibodies (titer 1:640). Bartonella henselae was not cultivatable from cat blood. Ten more feeding ticks removed 7 months later contained also B. henselae DNA. Sequence analysis of the 16SrDNA and the 16S-23S internal transcribed spacer (ITS) region revealed 100% sequence homology between all ticks. Bartonella adhesin A (badA) and VirB/VirD4 type IV secretion system (virB) DNA were also detected in all ticks.
Conclusions: Our results indicate that cats may serve as a reservoir for adult ticks to acquire B. henselae. Whether this observation implies an increased threat for human and animal health needs to be resolved.
We aimed to prospectively assess changes in chronic stress among young adults transitioning from high school to university or working life. A population-based cohort in Munich and Dresden (Germany) was followed from age 16–18 (2002–2003) to age 20–23 (2007–2009) (n = 1688). Using the Trier Inventory for the Assessment of Chronic Stress, two dimensions of stress at university or work were assessed: work overload and work discontent. In the multiple ordinal generalized estimating equations, socio-demographics, stress outside the workplace, and job history were additionally considered. At follow-up, 52% of the population were university students. Work overload increased statistically significantly from first to second follow-up, while work discontent remained constant at the population level. Students, compared to employees, reported a larger increase in work overload (adjusted odds ratio (OR): 1.33; 95% confidence interval (95% CI): 1.07, 1.67), while work discontent did not differ between the groups. In conclusion, work overload increases when young adults transition from school to university/job life, with university students experiencing the largest increase.
Metal ions as novel polarizing agents for dynamic nuclear polarization enhanced NMR spectroscopy
(2017)
High-spin complexes of Gd(III) and Mn(II) were introduced as polarizing agents (PAs) for solid-state dynamic nuclear polarization (DNP) in 2011. This dissertation was undertaken in 2013, with the intention of exploring these PAs further. Major goals of this work were to understand their DNP mechanism(s) and explore their application in biomolecular research. This cumulative thesis details the methods, advantages, and practical implications of using high-spin PAs for MAS DNP. Data from electron paramagnetic resonance (EPR) and NMR spectroscopy are discussed for a complete understanding of DNP mechanisms.
Out of the two main mechanisms − solid effect (SE) and cross effect (CE − active under experimental conditions of solid-state DNP, commonly used nitroxide PAs evoke CE owing to their broad EPR spectra. On the other hand, DNP mechanisms evoked by high-spin metal ions seem non-trivial due to additional features (originating from spin-orbit coupling or zero field splitting) in their EPR spectra. The features of the EPR signal generally influence the shape of enhancement profiles. Therefore, the metal ion with a simpler EPR signal i.e., Gd(III) , is chosen as the starting point for the investigation of DNP mechanisms. Varying concentrations (2, 10, 20 mM) of a water-soluble and stable complex Gd-DOTA was dissolved as the PA in a glycerol-water solution of 13C,15N - urea. Field profiles of DNP enhancement on each nuclear type (1H, 13C, and 15N) establishes SE as the active DNP mechanism at the smallest PA concentration (2 mM). This confirms the theoretical predictions that narrow line width of the Gd(III) EPR signal arising from the central transition (CT, ms = -1/2 +1/2) allows for resolved SE DNP. However, that is no longer the case at higher PA concentrations of 10 and 20 mM. At higher Gd(III) concentrations, the CE mechanism contributes significantly and varies with nuclear Larmor frequency (ωn) of the concerned nuclei. The enhancement maxima shifts towards the EPR resonance as the contribution from CE increases. This shift is evident in the field profiles of 15N and 13C, whereas that of 1H is least influenced. This observation can be explained by combining theoretical estimates with the experimental data; the CE is evoked by increased dipolar coupling (Dee) – a prerequisite for CE – between neighboring Gd(III) spins as the statistical inter-spin distance shortens at elevated concentrations. This finding is important because the knowledge of active DNP mechanisms is essential for accurate interpretation of results from DNP experiments.
From the experiments on Gd-DOTA it becomes clear that concentration, inter-spin distances, and hence induced Dee are intertwined. In order to explicitly address the influence of inter-spin distances on DNP mechanisms we started a collaboration with the group of Adelheid Godt (Bielefeld). In this collaborative project, bis-complexes of the type Gd(III)-spacer-Gd(III) with variable spacer lengths were investigated. These PAs provided an excellent model system where the influence of only inter-spin distances can be determined for a fixed Gd(III) concentration. A small PA concentration of 4 mM is used to ensure absence of significant inter-molecular dipolar interactions. A mono-Gd complex of similar geometry and chemistry is taken as a reference for SE DNP.
The mono-Gd complex yields enhancements arising from SE as expected from negligible inter-molecular Dee. The contribution of CE increases as the inter-spin distances between Gd(III) ions become shorter going from 3.4 nm 2.1 nm 1.4 nm 1.2 nm due to corresponding increase in Dee. The extent of CE on ωn follows the same trend as for Gd-DOTA. Highest CE contribution is observed on nuclei with the smallest ωn 15N because smaller ωn approaches the width of the EPR signal, this is an additional requirement for CE DNP.
The field position for maximum DNP enhancement corresponding to Gd-DOTA, is used for DNP experiments on Ubiquitin with an attached Gd-tag as PA. The success of DNP on this sample illustrates the possibility of site-directed DNP with metal ions tags as PAs. As a perspective Gd-tags can be used to examine change in conformation of a protein that would give higher enhancements due to CE if two Gd(III) labeled domains are closer in space. In a separate project, Mn(II) (s=5/2) bound to the divalent site of a hammerhead ribozyme was used as a PA which resulted in the first demonstration of intra-complex DNP using an intrinsically bound metal ion PA.