TY - JOUR A1 - Herhaus, Lina A1 - Bhaskara, Ramachandra M. A1 - Lystad, Alf Håkon A1 - Gestal-Mato, Uxía A1 - Covarrubias-Pinto, Adriana A1 - Bonn, Florian A1 - Simonsen, Anne A1 - Hummer, Gerhard A1 - Đikić, Ivan T1 - TBK1-mediated phosphorylation of LC3C and GABARAP-L2 controls autophagosome shedding by ATG4 protease T2 - EMBO reports N2 - Autophagy is a highly conserved catabolic process through which defective or otherwise harmful cellular components are targeted for degradation via the lysosomal route. Regulatory pathways, involving post-translational modifications such as phosphorylation, play a critical role in controlling this tightly orchestrated process. Here, we demonstrate that TBK1 regulates autophagy by phosphorylating autophagy modifiers LC3C and GABARAP-L2 on surface-exposed serine residues (LC3C S93 and S96; GABARAP-L2 S87 and S88). This phosphorylation event impedes their binding to the processing enzyme ATG4 by destabilizing the complex. Phosphorylated LC3C/GABARAP-L2 cannot be removed from liposomes by ATG4 and are thus protected from ATG4-mediated premature removal from nascent autophagosomes. This ensures a steady coat of lipidated LC3C/GABARAP-L2 throughout the early steps in autophagosome formation and aids in maintaining a unidirectional flow of the autophagosome to the lysosome. Taken together, we present a new regulatory mechanism of autophagy, which influences the conjugation and de-conjugation of LC3C and GABARAP-L2 to autophagosomes by TBK1-mediated phosphorylation. KW - ATG4 KW - ATG8 KW - autophagy KW - phosphorylation KW - TBK1 Y1 - 2019 UR - http://publikationen.ub.uni-frankfurt.de/frontdoor/index/index/docId/63815 UR - https://nbn-resolving.org/urn:nbn:de:hebis:30:3-638159 SN - 1469-3178 N1 - This work was supported by grants from the DFG (SFB 1177 on selective autophagy), the Cluster of Excellence “Macromolecular Complexes” of the Goethe University Frankfurt (EXC 115). L.H. is supported by a European Molecular Biology Organization (EMBO) long-term postdoctoral fellowship (ALTF 1200-2014, LTFCOFUND2013, GA-2013-609409). R.M.B. and G.H. acknowledge support by the Max Planck Society and computational resources at MPCDF, Garching. A.H.L. and A.S. were supported by the Research Council of Norway (project number 221831) and through its Centers of Excellence funding scheme (project number 262652), as well as the Norwegian Cancer Society (project number 171318). VL - 21 IS - 1, art. e48317 SP - 1 EP - 20 PB - EMBO Press CY - Heidelberg ER -