HEATSTER : a database and web server for identification and classification of heat stress transcription factors in plants

  • Heat stress transcription factors (HSFs) regulate transcriptional response to a large number of environmental influences, such as temperature fluctuations and chemical compound applications. Plant HSFs represent a large and diverse gene family. The HSF members vary substantially both in gene expression patterns and molecular functions. HEATSTER is a web resource for mining, annotating, and analyzing members of the different classes of HSFs in plants. A web-interface allows the identification and class assignment of HSFs, intuitive searches in the database and visualization of conserved motifs, and domains to classify novel HSFs.
Author:Jannik Berz, Stefan Simm, Sebastian Schuster, Klaus-Dieter Scharf, Enrico SchleiffORCiDGND, Ingo EbersbergerORCiDGND
Pubmed Id:https://pubmed.ncbi.nlm.nih.gov/30670918
Parent Title (English):Bioinformatics and biology insights
Publisher:Sage Publications
Place of publication:Thousand Oaks, CA
Document Type:Article
Year of Completion:2019
Date of first Publication:2019/01/07
Publishing Institution:Universitätsbibliothek Johann Christian Senckenberg
Release Date:2019/02/28
Tag:HSF; database; heat stress; motif search
Page Number:5
First Page:1
Last Page:5
Creative Commons Non Commercial CC BY-NC: This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
Institutes:Biowissenschaften / Biowissenschaften
Angeschlossene und kooperierende Institutionen / Senckenbergische Naturforschende Gesellschaft
Fachübergreifende Einrichtungen / Biodiversität und Klima Forschungszentrum (BiK-F)
Exzellenzcluster / Exzellenzcluster Makromolekulare Komplexe
Wissenschaftliche Zentren und koordinierte Programme / Frankfurt Institute for Advanced Studies (FIAS)
Dewey Decimal Classification:5 Naturwissenschaften und Mathematik / 58 Pflanzen (Botanik) / 580 Pflanzen (Botanik)
Licence (English):License LogoCreative Commons - Namensnennung-Nicht kommerziell 4.0