HEATSTER : a database and web server for identification and classification of heat stress transcription factors in plants
- Heat stress transcription factors (HSFs) regulate transcriptional response to a large number of environmental influences, such as temperature fluctuations and chemical compound applications. Plant HSFs represent a large and diverse gene family. The HSF members vary substantially both in gene expression patterns and molecular functions. HEATSTER is a web resource for mining, annotating, and analyzing members of the different classes of HSFs in plants. A web-interface allows the identification and class assignment of HSFs, intuitive searches in the database and visualization of conserved motifs, and domains to classify novel HSFs.
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| Author: | Jannik Berz, Stefan Simm, Sebastian Schuster, Klaus-Dieter Scharf, Enrico SchleiffORCiDGND, Ingo EbersbergerORCiDGND |
|---|---|
| URN: | urn:nbn:de:hebis:30:3-492870 |
| DOI: | https://doi.org/10.1177/1177932218821365 |
| ISSN: | 1177-9322 |
| Pubmed Id: | https://pubmed.ncbi.nlm.nih.gov/30670918 |
| Parent Title (English): | Bioinformatics and biology insights |
| Publisher: | Sage Publications |
| Place of publication: | Thousand Oaks, CA |
| Document Type: | Article |
| Language: | English |
| Year of Completion: | 2019 |
| Date of first Publication: | 2019/01/07 |
| Publishing Institution: | Universitätsbibliothek Johann Christian Senckenberg |
| Release Date: | 2019/02/28 |
| Tag: | HSF; database; heat stress; motif search |
| Volume: | 13 |
| Page Number: | 5 |
| First Page: | 1 |
| Last Page: | 5 |
| Note: | Creative Commons Non Commercial CC BY-NC: This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
| HeBIS-PPN: | 446477192 |
| Institutes: | Biowissenschaften / Biowissenschaften |
| Angeschlossene und kooperierende Institutionen / Senckenbergische Naturforschende Gesellschaft | |
| Fachübergreifende Einrichtungen / Biodiversität und Klima Forschungszentrum (BiK-F) | |
| Exzellenzcluster / Exzellenzcluster Makromolekulare Komplexe | |
| Wissenschaftliche Zentren und koordinierte Programme / Frankfurt Institute for Advanced Studies (FIAS) | |
| Dewey Decimal Classification: | 5 Naturwissenschaften und Mathematik / 58 Pflanzen (Botanik) / 580 Pflanzen (Botanik) |
| Sammlungen: | Universitätspublikationen |
| Open-Access-Publikationsfonds: | Biowissenschaften |
| Licence (English): |  Creative Commons - Namensnennung-Nicht kommerziell 4.0 |
