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Machine learning identifies ICU outcome predictors in a multicenter COVID-19 cohort

  • Background: Intensive Care Resources are heavily utilized during the COVID-19 pandemic. However, risk stratification and prediction of SARS-CoV-2 patient clinical outcomes upon ICU admission remain inadequate. This study aimed to develop a machine learning model, based on retrospective & prospective clinical data, to stratify patient risk and predict ICU survival and outcomes. Methods: A Germany-wide electronic registry was established to pseudonymously collect admission, therapeutic and discharge information of SARS-CoV-2 ICU patients retrospectively and prospectively. Machine learning approaches were evaluated for the accuracy and interpretability of predictions. The Explainable Boosting Machine approach was selected as the most suitable method. Individual, non-linear shape functions for predictive parameters and parameter interactions are reported. Results: 1039 patients were included in the Explainable Boosting Machine model, 596 patients retrospectively collected, and 443 patients prospectively collected. The model for prediction of general ICU outcome was shown to be more reliable to predict “survival”. Age, inflammatory and thrombotic activity, and severity of ARDS at ICU admission were shown to be predictive of ICU survival. Patients’ age, pulmonary dysfunction and transfer from an external institution were predictors for ECMO therapy. The interaction of patient age with D-dimer levels on admission and creatinine levels with SOFA score without GCS were predictors for renal replacement therapy. Conclusions: Using Explainable Boosting Machine analysis, we confirmed and weighed previously reported and identified novel predictors for outcome in critically ill COVID-19 patients. Using this strategy, predictive modeling of COVID-19 ICU patient outcomes can be performed overcoming the limitations of linear regression models. Trial registration “ClinicalTrials” (clinicaltrials.gov) under NCT04455451.

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Author:Harry Magunia, Simone Lederer, Raphael Verbuecheln, Bryant Gilot, Michael Köppen, Helene Häberle, Valbona Mirakaj, Pascal Hofmann, Gernot Marx, Johannes Bickenbach, Boris Nohe, Michael Lay, Claudia D. Spies, Andreas Edel, Fridtjof Schiefenhövel, Tim Rahmel, Christian Putensen, Timur Sellmann, Thea Koch, Timo Brandenburger, Detlef Kindgen-Milles, Thorsten Brenner, Marc Berger, Kai ZacharowskiORCiDGND, Elisabeth AdamORCiDGND, Matthias Posch, Onnen Mörer, Christian S. Scheer, Daniel Sedding, Markus A. WeigandGND, Falk Fichtner, Carla Nau, Florian Prätsch, Thomas Wiesmann, Christian Koch, Gerhard Schneider, Tobias Lahmer, Andreas Straub, Andreas Meiser, Manfred Weiß, Bettina Jungwirth, Frank Wappler, Patrick MeybohmORCiDGND, Johannes Herrmann, Nisar Peter Malek, Oliver Kohlbacher, Stephanie Biergans, Peter Rosenberger
URN:urn:nbn:de:hebis:30:3-629765
DOI:https://doi.org/10.1186/s13054-021-03720-4
ISSN:1466-609X
Parent Title (English):Critical care 25.2021, art. 295, doi: 10.1186/s13054-021-03720-4, ISSN 1466-609X
Publisher:BioMed Central
Place of publication:London
Document Type:Article
Language:English
Date of Publication (online):2021/08/17
Date of first Publication:2021/08/17
Publishing Institution:Universitätsbibliothek Johann Christian Senckenberg
Release Date:2022/05/18
Tag:ARDS; COVID-19; Critical care; Outcome; Prognostic models
Volume:25
Issue:art. 295
Page Number:14
First Page:1
Last Page:14
Note:
The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
Note:
Open Access funding enabled and organized by Projekt DEAL. This work was funded by a grant from the Deutsche Forschungsgemeinschaft DFG RO 3671/8-1 to P.R. O.K. received funding from the Bundesministerium für Bildung und Forschung (BMBF) (DIFUTURE, 01ZZ1804D). Funding of the participating centers: Department of Anaesthesiology, Intensive Care Medicine and Pain Therapy, University Hospital Frankfurt, Goethe University, Frankfurt, Germany: This work was funded by the grant Horizon 2020 Framework Programme, Call: H2020-SC1-PHE-CORONAVIRUS-2020–2-CNECT; Project: 101015930 — ENVISION to K.Z.
HeBIS-PPN:495855286
Institutes:Medizin
Dewey Decimal Classification:6 Technik, Medizin, angewandte Wissenschaften / 61 Medizin und Gesundheit / 610 Medizin und Gesundheit
Sammlungen:Universitätspublikationen
Licence (German):License LogoCreative Commons - Namensnennung 4.0