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Non-standard errors (2021)
Menkveld, Albert J. ; Dreber, Anna ; Holzmeister, Felix ; Huber, Jürgen ; Johannesson, Magnus ; Kirchler, Michael ; Razen, Michael ; Weitzel, Utz ; Abad Díaz, David ; Abudy, Menachem ; Adrian, Tobias ; Ait-Sahalia, Yacine ; Akmansoy, Olivier ; Alcock, Jamie ; Alexeev, Vitali ; Aloosh, Arash ; Amato, Livia ; Amaya, Diego ; Angel, James ; Bach, Amadeus ; Baidoo, Edwin ; Bakalli, Gaetan ; Barbon, Andrea ; Bashchenko, Oksana ; Bindra, Parampreet Christopher ; Bjonnes, Geir Hoidal ; Black, Jeff ; Black, Bernard S. ; Bohorquez, Santiago ; Bondarenko, Oleg ; Bos, Charles S. ; Bosch-Rosa, Ciril ; Bouri, Elie ; Brownlees, Christian ; Calamia, Anna ; Cao, Viet Nga ; Capelle-Blancard, Gunther ; Capera, Laura ; Caporin, Massimiliano ; Carrion, Allen ; Caskurlu, Tolga ; Chakrabarty, Bidisha ; Chernov, Mikhail ; Cheung, William M. ; Chincarini, Ludwig Boris ; Chordia, Tarun ; Chow, Sheung Chi ; Clapham, Benjamin ; Colliard, Jean-Edouard ; Comerton-Forde, Carole ; Curran, Edward ; Dao, Thong ; Dare, Wale ; Davies, Ryan J. ; De Blasis, Riccardo ; De Nard, Gianluca ; Declerck, Fany ; Deev, Oleg ; Degryse, Hans ; Deku, Solomon ; Desagre, Christophe ; Dijk, Mathijs van ; Dim, Chukwuma ; Dimpfl, Thomas ; Dong, Yun Jiang ; Drummond, Philip ; Dudda, Tom ; Dumitrescu, Ariadna ; Dyakov, Teodor ; Haubo Dyhrberg, Anne ; Dzieliński, Michał ; Eksi, Asli ; El Kalak, Izidin ; Ellen, Saskia ter ; Eugster, Nicolas ; Evans, Martin D. D. ; Farrell, Michael ; Félez-Viñas, Ester ; Ferrara, Gerardo ; Ferrouhi, El Mehdi ; Flori, Andrea ; Fluharty-Jaidee, Jonathan ; Foley, Sean ; Fong, Kingsley Y. L. ; Foucault, Thierry ; Franus, Tatiana ; Franzoni, Francesco ; Frijns, Bart ; Frömmel, Michael ; Fu, Servanna ; Füllbrunn, Sascha ; Gan, Baoqing ; Gehrig, Thomas ; Gerritsen, Dirk ; Gil-Bazo, Javier ; Glosten, Lawrence R. ; Gomez, Thomas ; Gorbenko, Arseny ; Güçbilmez, Ufuk ; Grammig, Joachim ; Gregoire, Vincent ; Hagströmer, Björn ; Hambuckers, Julien ; Hapnes, Erik ; Harris, Jeffrey H. ; Harris, Lawrence ; Hartmann, Simon ; Hasse, Jean-Baptiste ; Hautsch, Nikolaus ; He, Xuezhong ; Heath, Davidson ; Hediger, Simon ; Hendershott, Terrence ; Hibbert, Ann Marie ; Hjalmarsson, Erik ; Hoelscher, Seth A. ; Hoffmann, Peter ; Holden, Craig W. ; Horenstein, Alex R. ; Huang, Wenqian ; Huang, Da ; Hurlin, Christophe ; Ivashchenko, Alexey ; Iyer, Subramanian Rama ; Jahanshahloo, Hossein ; Jalkh, Naji ; Jones, Charles M. ; Jurkatis, Simon ; Jylha, Petri ; Kaeck, Andreas ; Kaiser, Gabriel ; Karam, Arzé ; Karmaziene, Egle ; Kassner, Bernhard ; Kaustia, Markku ; Kazak, Ekaterina ; Kearney, Fearghal ; Kervel, Vincent van ; Khan, Saad ; Khomyn, Marta ; Klein, Tony ; Klein, Olga ; Klos, Alexander ; Koetter, Michael ; Krahnen, Jan Pieter ; Kolokolov, Aleksey ; Korajczyk, Robert A. ; Kozhan, Roman ; Kwan, Amy ; Lajaunie, Quentin ; Lam, FY Eric C ; Lambert, Marie ; Langlois, Hugues ; Lausen, Jens ; Lauter, Tobias ; Leippold, Markus ; Levin, Vladimir ; Li, Yijie ; Li, Hui ; Liew, Chee Yoong ; Lindner, Thomas ; Linton, Oliver B. ; Liu, Jiacheng ; Liu, Anqi ; Llorente, Guillermo ; Lof, Matthijs ; Lohr, Ariel ; Longstaff, Francis A. ; Lopez-Lira, Alejandro ; Mankad, Shawn ; Mano, Nicola ; Marchal, Alexis ; Martineau, Charles ; Mazzola, Francesco ; Meloso, Debrah ; Mihet, Roxana ; Mohan, Vijay ; Moinas, Sophie ; Moore, David ; Mu, Liangyi ; Muravyev, Dmitriy ; Murphy, Dermot ; Neszveda, Gabor ; Neumeier, Christian ; Nielsson, Ulf ; Nimalendran, Mahendrarajah ; Nolte, Sven ; Norden, Lars L. ; O'Neill, Peter ; Obaid, Khaled ; Ødegaard, Bernt Arne ; Östberg, Per ; Painter, Marcus ; Palan, Stefan ; Palit, Imon ; Park, Andreas ; Pascual, Roberto ; Pasquariello, Paolo ; Pastor, Lubos ; Patel, Vinay ; Patton, Andrew J. ; Pearson, Neil D. ; Pelizzon, Loriana ; Rzeźnik, Aleksandra ; Sanford, Anthony ; Sankaran, Harikumar ; Sarkar, Asani ; Sarno, Lucio ; Scaillet, O. ; Scharnowski, Stefan ; Schenk-Hoppé, Klaus Reiner ; Schertler, Andrea ; Schneider, Michael ; Schroeder, Florian ; Schürhoff, Norman ; Schuster, Philipp ; Schwarz, Marco A. ; Seasholes, Mark S. ; Seeger, Norman ; Shachar, Or ; Shkilko, Andriy ; Shui, Jessica ; Sikic, Mario ; Simion, Giorgia ; Smales, Lee A. ; Söderlind, Paul ; Sojli, Elvira ; Sokolov, Konstantin ; Spokeviciute, Laima ; Stefanova, Denitsa ; Subrahmanyam, Marti G. ; Neusüss, Sebastian ; Szaszi, Barnabas ; Talavera, Oleksandr ; Tang, Yuehua ; Taylor, Nicholas ; Tham, Wing Wah ; Theissen, Erik ; Thimme, Julian ; Tonks, Ian ; Tran, Hai ; Trapin, Luca ; Trolle, Anders B. ; Valente, Giorgio ; Van Ness, Robert A. ; Vasquez, Aurelio ; Verousis, Thanos ; Verwijmeren, Patrick ; Vilhelmsson, Anders ; Vilkov, Grigory ; Vladimirov, Vladimir ; Vogel, Sebastian ; Voigt, Stefan ; Wagner, Wolf ; Walther, Thomas ; Weiss, Patrick ; Wel, Michel van der ; Werner, Ingrid M. ; Westerholm, Joakim ; Westheide, Christian ; Wipplinger, Evert ; Wolf, Michael ; Wolff, Christiaan Cornelis Petrus ; Wolk, Leonard ; Wong, Wing Keung ; Wrampelmeyer, Jan ; Xia, Shuo ; Xiu, Dacheng ; Xu, Ke ; Xu, Caihong ; Yadav, Pradeep ; Yagüe, José ; Yan, Cheng ; Yang, Antti ; Yoo, Woongsun ; Yu, Wenjia ; Yu, Shihao ; Yueshen, Bart Zhou ; Yuferova, Darya ; Zamojski, Marcin ; Zareei, Abalfazl ; Zeisberger, Stefan ; Zhang, Sarah ; Zhang, Xiaoyu ; Zhong, Zhuo ; Zhou, Z. Ivy ; Zhou, Chen ; Zhu, Xingyu Sonya ; Zoican, Marius ; Zwinkels, Remco C. J. ; Chen, Jian ; Duevski, Teodor ; Gao, Ge ; Gemayel, Roland ; Gilder, Dudley ; Kuhle, Paul ; Pagnotta, Emiliano ; Pelli, Michele ; Sönksen, Jantje ; Zhang, Lu ; Ilczuk, Konrad ; Bogoev, Dimitar ; Qian, Ya ; Wika, Hans C. ; Yu, Yihe ; Zhao, Lu ; Mi, Michael ; Bao, Li ; Vaduva, Andreea ; Prokopczuk, Marcel ; Avetikian, Alejandro ; Wu, Zhen-Xing
In statistics, samples are drawn from a population in a data-generating process (DGP). Standard errors measure the uncertainty in sample estimates of population parameters. In science, evidence is generated to test hypotheses in an evidence-generating process (EGP). We claim that EGP variation across researchers adds uncertainty: non-standard errors. To study them, we let 164 teams test six hypotheses on the same sample. We find that non-standard errors are sizeable, on par with standard errors. Their size (i) co-varies only weakly with team merits, reproducibility, or peer rating, (ii) declines significantly after peer-feedback, and (iii) is underestimated by participants.
Bridging big data: procedures for combining non-equivalent cognitive measures from the ENIGMA Consortium (2023)
Kennedy, Eamonn ; Vadlamani, Shashank ; Lindsey, Hannah M ; Lei, Pui-Wa ; Jo-Pugh, Mary ; Adamson, Maheen ; Alda, Martin ; Alonso-Lana, Silvia ; Ambrogi, Sonia ; Anderson, Tim J. ; Arango, Celso ; Asarnow, Robert F ; Avram, Mihai ; Ayesa-Arriola, Rosa ; Babikian, Talin ; Banaj, Nerisa ; Bird, Laura J. ; Borgwardt, Stefan ; Brodtmann, Amy ; Brosch, Katharina ; Caeyenberghs, Karen ; Calhoun, Vince D ; Chiaravalloti, Nancy D. ; Cifu, David X ; Crespo-Facorro, Benedicto ; Dalrymple-Alford, John C ; Dams-O’Connor, Kristen ; Dannlowski, Udo ; Darby, David ; Davenport, Nicholas ; DeLuca, John ; Diaz-Caneja, Covadonga M ; Disner, Seth G. ; Dobryakova, Ekaterina ; Ehrlich, Stefan ; Esopenko, Carrie ; Ferrarelli, Fabio ; Frank, Lea E. ; Franz, Carol ; Fuentes-Claramonte, Paola ; Genova, Helen ; Giza, Christopher C. ; Goltermann, Janik ; Grotegerd, Dominik ; Gruber, Marius ; Gutiérrez-Zotes, Alfonso ; Ha, Minji ; Haavik, Jan ; Hinkin, Charles ; Hoskinson, Kristen R. ; Hubl, Daniela ; Irimia, Andrei ; Jansen, Andreas ; Kaess, Michael ; Kang, Xiaojian ; Kenney, Kimbra ; Keřková, Barbora ; Khlif, Mohamed Salah ; Kim, Minah ; Kindler, Jochen ; Kircher, Tilo ; Knı́žková, Karolina ; Kolskår, Knut K. ; Krch, Denise ; Kremen, William S. ; Kuhn, Taylor ; Kumari, Veena ; Kwon, Jun Soo ; Langella, Roberto ; Laskowitz, Sarah ; Lee, Jungha ; Lengenfelder, Jean ; Liebel, Spencer W. ; Liou-Johnson, Victoria ; Lippa, Sara M ; Løvstad, Marianne ; Lundervold, Astri ; Marotta, Cassandra ; Marquardt, Craig A. ; Mattos, Paulo ; Mayeli, Ahmad ; McDonald, Carrie R ; Meinert, Susanne ; Melzer, Tracy R ; Merchán Naranjo, Jessica ; Michel, Chantal ; Morey, Rajendra A ; Mwangi, Benson ; Myall, Daniel J ; Nenadić, Igor ; Newsome, Mary R ; Nunes, Abraham ; O’Brien, Terence ; Oertel, Viola ; Ollinger, John ; Olsen, Alexander ; Ortiz Garcı́a de la Foz, Victor ; Ozmen, Mustafa ; Pardoe, Heath ; Parent, Marise ; Piras, Fabrizio ; Piras, Federica ; Pomarol-Clotet, Edith ; Repple, Jonathan ; Richard, Geneviève ; Rodriguez, Jonathan ; Rodriguez, Mabel ; Rootes-Murdy, Kelly ; Rowland, Jared ; Ryan, Nicholas P. ; Salvador, Raymond ; Sanders, Anne-Marthe ; Schmidt, André ; Soares, Jair C ; Spalleta, Gianfranco ; Španiel, Filip ; Stasenko, Alena ; Stein, Frederike ; Straube, Benjamin ; Thames, April ; Thomas-Odenthal, Florian ; Thomopoulos, Sophia I ; Tone, Erin ; Torres, Ivan ; Troyanskaya, Maya ; Turner, Jessica A ; Ulrichsen, Kristine M. ; Umpierrez, Guillermo ; Vilella, Elisabet ; Vivash, Lucy ; Walker, William C ; Werden, Emilio ; Westlye, Lars T. ; Wild, Krista ; Wroblewski, Adrian ; Wu, Mon-Ju ; Wylie, Glenn R ; Yatham, Lakshmi N ; Zunta-Soares, Giovana B ; Thompson, Paul M. ; Tate, David F ; Hillary, Frank G ; Dennis, Emily L. ; Wilde, Elisabeth A.
Investigators in the cognitive neurosciences have turned to Big Data to address persistent replication and reliability issues by increasing sample sizes, statistical power, and representativeness of data. While there is tremendous potential to advance science through open data sharing, these efforts unveil a host of new questions about how to integrate data arising from distinct sources and instruments. We focus on the most frequently assessed area of cognition - memory testing - and demonstrate a process for reliable data harmonization across three common measures. We aggregated raw data from 53 studies from around the world which measured at least one of three distinct verbal learning tasks, totaling N = 10,505 healthy and brain-injured individuals. A mega analysis was conducted using empirical bayes harmonization to isolate and remove site effects, followed by linear models which adjusted for common covariates. After corrections, a continuous item response theory (IRT) model estimated each individual subject’s latent verbal learning ability while accounting for item difficulties. Harmonization significantly reduced inter-site variance by 37% while preserving covariate effects. The effects of age, sex, and education on scores were found to be highly consistent across memory tests. IRT methods for equating scores across AVLTs agreed with held-out data of dually-administered tests, and these tools are made available for free online. This work demonstrates that large-scale data sharing and harmonization initiatives can offer opportunities to address reproducibility and integration challenges across the behavioral sciences.
On Powellithecidae fam. nov., a new Pliocene to Recent bryozoan family endemic to New Zealand, with the description of Powellitheca gen. nov. (Bryozoa, Cheilostomata) (2016)
Di Martino, Emanuela ; Taylor, Paul D. ; Gordon, Dennis P. ; Liow, Lee Hsiang
A new cheilostome bryozoan genus, Powellitheca gen. nov., is erected here for three species from New Zealand, one of which has been previously assigned to Emballotheca Levinsen, 1909, but which differ significantly from the Australian type species of Emballotheca, E. quadrata (MacGillivray, 1880). Notably, whereas Emballotheca has a cormidial orifice (i.e., formed by numerous neighbouring zooids), and lepralielliform ooecia, the orifice of Powellitheca gen. nov. is formed by single zooids and ooecia are of the microporelliform type. The introduction of a new family, Powellithecidae fam. nov., becomes necessary because of the nonconformity of Powellitheca gen. nov. with other known families having microporelliform ooecia. In addition to the Recent type species Powellitheca terranovae gen. et sp. nov., one other new Recent species, P. labiosa gen. et sp. nov., and a Plio-Pleistocene fossil species, Monoporella waipukurensis Waters, 1887, are assigned to the new genus.
Cheilostome Bryozoa from Penang and Langkawi, Malaysia (2015)
Taylor, Paul D. ; Tan, Shau-Hwai Aileen
Twenty-three species of cheilostome bryozoans are described from the Malaysian islands of Penang and Langkawi based on a brief reconnaisance survey of shore localities. These are the first bryozoans to be formally described from either island and they demonstrate the potential for further research on these neglected suspension feeders. Of the 23 species recorded, 12 are anascans, half of which are malacostegines, and 11 are ascophorans. The new combinations Acanthodesia falsitenuis (Liu, 1992), A. perambulata (Louis & Menon, 2009) and A. irregulata (Liu, 1992) are introduced. Most of the species recorded are widespread in the Indo-Pacific, and some are apparently globally distributed in the tropics and subtropics, including the invasive fouling species Bugula neritina, Hippoporina indica and Schizoporella japonica, as well as the coral reef associates Cranosina coronata and Hippopodina feegeensis. Plastic debris and glass bottles were encrusted by Jellyella eburnea, a coloniser of floating biological and man-made objects that is becoming widespread in the tropics and subtropics of the world’s oceans.
New bryozoan species from the Pleistocene of the Wanganui Basin, North Island, New Zealand (2017)
Di Martino, Emanuela ; Taylor, Paul D. ; Gordon, Dennis P. ; Liow, Lee Hsiang
Three new fossil bryozoan species, a ctenostome and two cheilostomes, are described and figured from Pleistocene strata of the Wanganui Basin, New Zealand. Buskia waiinuensis sp. nov., a soft-body ctenostome preserved as a mould bioimmuration, is the first fossil record of the genus from New Zealand. Microporella rusti sp. nov., which is notable for the lack of ooecia in the large suite of colonies available, is one of the most common bryozoans in the Nukumaru Limestone and Nukumaru Brown Sand shellbeds, forming large encrusting sheet-like colonies, but is uncommon in younger beds. Rare, small-sized colonies of Parkermavella columnaris sp. nov. were found as fossil in two Quaternary beds, the Nukumaru Limestone and the Upper Kai-Iwi Shellbed, and also alive on rocks from greater Cook Strait area.
Rhagasostoma (Bryozoa) from the Late Cretaceous of Eurasia: taxonomic revision, stratigraphy and palaeobiogeography (2018)
Koromyslova, Anna V. ; Taylor, Paul D. ; Martha, Silviu O. ; Riley, Matthew
Species commonly assigned to the cheilostome bryozoan genus Onychocella Jullien, 1882 are numerous in deposits of Late Cretaceous age. Among these are 15 species with wide stratigraphical and geographical distributions that are better placed in the genus Rhagasostoma Koschinsky, 1885. These are used here to show similarities between Late Cretaceous bryozoan associations from Western Europe and Central Asia. Type and additional material was examined of several species from the Turonian to the Maastrichtian of Western Europe, including material studied by R.M. Brydone, E. Voigt and T.A. Favorskaya and undescribed material from the Campanian and Maastrichtian of several localities in Eastern Europe and Central Asia. The new species Rhagasostoma brydonei sp. nov., R. aralense sp. nov. and R. operculatum sp. nov. are introduced. New and published data on the morphology and the stratigraphical and geographical distributions of R. inelegans (Lonsdale, 1850), R. gibbosum (Marsson, 1887), R. gibbosulum Brydone, 1936, R. rowei (Brydone, 1906) and R. mimosa (Brydone, 1930) is presented.
Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern (2020)
Di Martino, Emanuela ; Taylor, Paul D. ; Gordon, Dennis P.
Microporella Hincks, 1877 is one of the most diverse genera of cheilostome bryozoans, containing more than 150 named species. Distributed globally since the early Miocene, the majority of species of Microporella have sheet-like colonies encrusting hard and / or ephemeral substrates, while a limited number of species have erect bifoliate colonies starting from an encrusting base. Herein, the four nominal species of erect bifoliate Microporella (M. bifoliata, M. hastigera, M. hyadesi and M. ordo) are revised, and one new Pliocene (M. tanyae sp. nov.) and three new Recent species (M. ordoides sp. nov., M. lingulata sp. nov. and M. modesta sp. nov.) are formally described. Furthermore, the lectotype and paralectotypes were designated for M. bifoliata and M. hastigera. An additional Recent species, Microporella sp. 1, is also described and illustrated but left in open nomenclature owing to the absence of ovicells in the single available fragment. Although the molecular phylogeny of Microporella has yet to be resolved, the diversity of character states present among the erect bifoliate species described here suggests that this colony growth-form is not monophyletic but has evolved on multiple occasions.
Disporella guada sp. nov., an erect-ramose rectangulate cyclostome (Bryozoa, Stenolaemata) from the Caribbean Sea: convergent evolution in bryozoan colony morphology (2021)
Taylor, Paul D. ; Harmelin, Jean-Georges ; Waeschenbach, Andrea ; Bouchon, Claude
The taxonomy of cyclostome bryozoans is founded on characters of the skeleton, but molecular sequence data have increasingly shown that established higher taxa are not monophyletic. Here we describe the skeletal morphology of a new species from Guadeloupe (French West Indies) with erect ramose colonies consisting of long, curved zooids that are typical of the suborder Cerioporina among living cyclostomes. However, molecular evidence from nuclear ribosomal RNA genes 18S and 28S places the new taxon in the suborder Rectangulata, where this colony-form has not been previously recorded. It nests firmly within the genus Disporella Gray, 1848, in a strongly supported clade that also includes Plagioecia patina (Lamarck, 1816) (Tubuliporina) and the sister taxa Doliocoitis cyanea Gordon & Taylor, 2001 (Rectangulata) and Favosipora rosea Gordon & Taylor, 2001 (Cerioporina). The short and robust branches of the new Guadeloupe cyclostome, here named Disporella guada Harmelin, Taylor & Waeschenbach sp. nov., are well adapted to life in shallow rocky sites exposed to severe wave action, which appear to be its exclusive habitat.
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