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In 2005 a team of Bulgarian zoologists started a project aiming to study the invertebrates inhabiting the deeper soil stratum (euedaphon) and the Superficial Underground Compartment (SUC) in Bulgaria. In the course of a four-year sampling, a total of 52 species of spiders were caught from 19 collecting sites and 9 geographical regions. They belong to the following families: Scytodidae (1), Segestriidae (1), Dysderidae (8), Nesticidae (1), Anapidae (1), Theridiidae (1), Linyphiidae (20), Agelenidae (3), Cybaeidae (1), Dictynidae (2), Amaurobiidae (2), Liocranidae (3), Corinnidae (1), Zodariidae (1), Gnaphosidae (5), and Salticidae (1). The family Anapidae, with the species Zangherella relicta (Kratochvíl, 1935) is recorded from three sites in the Pirin and Slavyanka mountains, and this represents the first record of the family, genus and species in Bulgaria. In spite of the active investigations of the epigean and cave spiders in these regions over the years Z. relicta was not found and it seems it occurs only in deeper subterranean habitats and nowhere else. Comparative study of almost topotypic specimens of Z. relicta from Montenegro with those collected from Bulgaria showed no variation in the shape of palp and female vulvae. Until the true identity of Z. apuliae (Caporiacco, 1949) from Italy is revealed, it remains unclear whether Z. relicta and Z. apuliae are conspecific, as it remains unclear whether the older records of Z. apuliae from the Balkan Peninsula refer to this species or to Z. relicta. Pelecopsis mengei (Simon, 1884) (Linyphiidae) and Scotolathys simplex Simon, 1884 (Dictynidae) are also reported from Bulgaria for the first time, the latter being also new to FYR of Macedonia. A faunistic overview of the spiders found in these underground environments is made, along with remarks on the distribution and ecology of some rare and interesting species. The presence of cave-dwelling and superficial spiders in the sampled sites indicates that SUC and euedaphon are inhabited by different ecotypes, e.g. litter-(tanathostromic), soil-(edaphic) and cave-(troglobitic) which at some places co-occur.
We demonstrate how a classical taxonomic description of a new species can be enhanced by applying new generation molecular methods, and novel computing and imaging technologies. A cave-dwelling centipede, Eupolybothrus cavernicolus Komerički & Stoev sp. n. (Chilopoda: Lithobiomorpha: Lithobiidae), found in a remote karst region in Knin, Croatia, is the first eukaryotic species for which, in addition to the traditional morphological description, we provide a fully sequenced transcriptome, a DNA barcode, detailed anatomical X-ray microtomography (micro-CT) scans, and a movie of the living specimen to document important traits of its ex-situ behaviour. By employing micro-CT scanning in a new species for the first time, we create a high-resolution morphological and anatomical dataset that allows virtual reconstructions of the specimen and subsequent interactive manipulation to test the recently introduced ‘cybertype’ notion. In addition, the transcriptome was recorded with a total of 67,785 scaffolds, having an average length of 812 bp and N50 of 1,448 bp (see GigaDB). Subsequent annotation of 22,866 scaffolds was conducted by tracing homologs against current available databases, including Nr, SwissProt and COG. This pilot project illustrates a workflow of producing, storing, publishing and disseminating large data sets associated with a description of a new taxon. All data have been deposited in publicly accessible repositories, such as GigaScience GigaDB, NCBI, BOLD, Morphbank and Morphosource, and the respective open licenses used ensure their accessibility and re-usability.