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Mit der Möglichkeit, Glas als Baustoff zu verwenden, beginnt die Ära der modernen Architektur. Bruno Traut gilt als einer der wichtigsten Protagonisten dieser expressionistischen Phase. Mit seinen funkelnden Kristallarchitekturen in den Alpen schuf er zumindest auf dem Papier Visionen von besonderer Strahlkraft. Im Geheimbund "Gläserne Kette" sahen er und seine Mitstreiter sich als Propheten und "übermenschliche Wächter" aller Künste. Die quasi religiös inspirierte Glasarchitektur wurde schon wenige Jahre später im Staatlichen Bauhaus Weimar durch Gropius' ästhetische Rationalität abgelöst.
The mammalian family of bears (Ursidae) comprises eight extant species, occurring on four different continents. Among them are the iconic and well-known brown and polar bears, both widely distributed across the Northern hemisphere. Their intraspecific genetic structuring has been extensively investigated, albeit with a focus on genetic markers from maternally inherited parts of their genomes (mitochondrial DNA). The evolutionary relationship and divergence time between brown and polar bears have recently triggered an extensive debate, while less focus has been put on to other parts of the ursid phylogeny, particularly to a clade of three Asian bear species. To date, whole genomes of more than 100 bear individuals from four different species have been sequenced. Yet, one fundamental part of the genome has been largely omitted from specific analyses, in bears as well as in most other mammals: the Y chromosome.
The mammalian Y chromosome provides a unique perspective on the evolutionary history of organisms due to its distinct features, and specifically reflects the patriline because of its male-specific inheritance. The characteristics of this chromosome make it well suited to complement and contrast evolutionary inferences based on other genetic markers, and to uncover processes like sex-biased gene flow and hybridization. The unique insights that can be gained from analyses of Y-linked genetic variation made me utilize this part of the genome to investigate the evolution of male lineages in bears. Studying the patriline is particularly promising in this taxonomic group because of male-biased dispersal and a complex and fast radiation of bears. The analysis of Y-chromosomal genetic markers is thus the common theme of this dissertation: I present the identification of large amounts of Y-chromosomal sequence, the development of male-specific markers from such sequences, and the application of these markers to trace the evolution of male lineages of different bear species.
Specifically, I developed a molecular sex determination system based on the detection of two Y-linked fragments that allows to reliably discriminate between females and males from seven different bear species (Bidon et al. 2013). The approach is highly sensitive, bear-specific, and can be applied in standard molecular laboratories. This makes it valuable in conservation genetics and forensic applications, e.g. to analyze non-invasively collected samples.
Furthermore, I used Y-linked markers in a comprehensive and range-wide sample of brown and polar bears, and show that male-biased gene flow plays an important role in distributing genetic material throughout the ranges of both species (Bidon et al. 2014). In brown bears, I detected a lack of paternal population structuring which is in strong contrast to the detailed structuring of the matriline.
Analyzing Y-chromosomal sequences from all eight bear species, I present a phylogeny of the patriline that largely resembles the topology from other nuclear markers but is different from the topology of the mitochondrial gene tree (Kutschera et al. 2014). This discordance among loci generates interesting hypotheses about inter-species gene flow, particularly among American and Asiatic black bears.
With the identification of almost two million basepairs of Y-chromosomal sequence and the analysis of an unprecedented large male-specific dataset in polar bears, a high-resolution view on the distribution of their intraspecific variation was obtained (Bidon et al. 2015). In particular, two clades that are divergent but do not show pronounced phylogeographic structure were detected, confirming the great dispersal capacity of males of this high arctic species.
This dissertation thus represents a comprehensive investigation of Y-linked genetic variation on the intra- and interspecific level in a non-model organism. With my research, I contribute to an increased understanding of the complex evolutionary history of bears. In particular, I show that male-biased gene flow strongly influences the distribution of nuclear genetic variation, and that the contrast between phylogenies of differentially inherited markers can help to understand interspecific hybridization between closely related species. Moreover, my findings demonstrate the potential of Y-chromosomal markers to uncover unknown evolutionary patterns and processes. This applies not only to bears but to many species, even such that are generally well known and well described.
"Vortreffliche Belichtung!" : die Erfindung des Oberlichts und der Weg zum modernen Kunstmuseum
(2015)
Der Umgang mit Licht ist beim Kuratieren von Ausstellungen und Sammlungspräsentationen von zentraler Bedeutung. Welchen Status erhalten die Exponate, welche Position nehmen sie innerhalb des Raums ein? Werden nur einzelne Objekte im Halbdunkel punktuell angestrahlt und geradezu auratisch inszeniert, oder wird der Raum gleichmäßig ausgeleuchtet? Die Debatte um diese Fragen erhielt durch den Bau der Kasseler Gemäldegalerie 1750 entscheidende Impulse.
"Mehr Licht!", um die "Seele" der Natur zu erfassen – das verband die Impressionisten mit der vorangegangenen Künstlergeneration um Camille Corot. Claude Monet und seine Kollegen suchten die Wälder und Parks auf, um Licht, Atmosphäre und Farbigkeit in ihrer Malerei festzuhalten. Dabei reagierten sie eher intuitiv auf die in jener Zeit intensiv erforschten optischen Gesetzmäßigkeiten.
Als sich am 16. Mai 1891 die Drehkreuze zur Internationalen Elektrotechnischen Ausstellung vor dem Frankfurter Bahnhof öffneten, gab es unter den Besuchern kaum noch Zweifel: Elektrizität und künstliche Helligkeit werden die westliche Zivilisation und ihre urbanen Lebenswelten geradezu revolutionär verändern. Das sollte sich bewahrheiten!
Mond und Sonne spielen als Hauptgestirne in der Mythologie vieler Völker Lateinamerikas eine bedeutende Rolle. Häufig sind sie maßgeblich an der Schöpfung beteiligt und werden mit der Fruchtbarkeit der Pflanzen sowie dem Wohlergehen der Menschen in Verbindung gebracht. Zahlreiche Mythen berichten von den Taten der beiden Gestirne, die manchmal als Geschwister oder auch als Liebespaar gelten.
Dass das Mittelalter "dunkel", gar "finster" gewesen sei, kann als handelsüblicher Topos gelten. Der stillschweigende Verweis etwa auf Autoritäten der Geistesgeschichte wie Luther, Voltaire oder Heine erübrigt jeglichen Beleg. Doch professionelle Mediävisten wagen, ein anderes Mittelalterbild zu zeichnen und werfen gleichzeitig ein Licht darauf, wie es zu diesem falschen Verständnis kam.
Dass nur das sonnenhafte Auge die Sonne erblicken kann, diese These geht wie so vieles letztlich auf Platon zurück. Der griechische Philosoph interessiert sich für Licht nicht in physikalischer, sondern in wahrnehmungstheoretischer Hinsicht. Und diese Hinsicht interessiert ihn wiederum, weil nach seiner Auffassung der Fall des Sehens zur Illustration des rationalen Erfassens von etwas dienen kann.
Leben braucht Licht und den täglichen Wechsel von Licht und Dunkel. Das gilt auch für den Menschen. Licht dient unserer Orientierung – nicht nur im Raum, sondern auch in der Zeit. Der Tag-Nacht-Wechsel ist der wichtigste Umweltreiz für die Taktung unserer Inneren Uhr. Zu wenig Licht am Tag und zu viel Licht in der Nacht kann sie aus dem Takt bringen und zu Schlafstörungen und Depressionen führen.
Photosynthese zwischen Überfluss und Mangel : wie Kieselalgen sich Lichtintensitäten anpassen
(2015)
Kieselalgen können auf hocheffiziente Weise Energie aus dem Sonnenlicht gewinnen. So überleben sie selbst lange Dunkelphasen im Meer. Doch wie schützen sie sich vor zu viel Strahlung, wenn Wind und Strömung sie in seichtes Wasser oder an die Oberfläche treiben? Dahinter steckt ein cleverer Regulations-Mechanismus.
Pflanzen, aber auch einige Bakterien und Archäen verfügen über hocheffiziente Mechanismen, Licht in Energie umzuwandeln. Photovoltaik-Zellen reichen an die Perfektion dieser natürlichen Systeme noch lange nicht heran. Deshalb versuchen Forscher, mit ultraschnellen spektroskopischen Methoden der Natur in die Karten zu schauen und von ihr zu lernen.
Der unscheinbare Fadenwurm "C. elegans" ist einer der ersten und bis heute wichtigsten Modellorganismen der Optogenetik. Zwei Frankfurter Arbeitsgruppen gelang es vor zehn Jahren erstmals, das Tier genetisch mit lichtaktivierbaren Ionenkanälen auszustatten und seine Bewegungen mit Licht zu steuern. Inzwischen studieren Forscher an dem durchsichtigen Wurm auch Prozesse, die für die medizinische Forschung bedeutsam sind – etwa die Entstehung und Behandlung genetisch bedingter Herz-Rhythmus-Störungen.
Mit der Optogenetik hat sich in der Neurowissenschaft eine Revolution vollzogen. Die Optogenetik erlaubt, Nervenzellen einfach mit Licht und mit bis dato nicht gekannter Genauigkeit zeitlich und räumlich elektrodenfrei an- und abzuschalten. Dies wird durch das Einbringen genetisch codierter Lichtschalter, sogenannter mikrobieller Rhodopsine, in den Nervenzellen erreicht. Die Methode, die in Frankfurt und in Regensburg ihren Ursprung genommen hat, wird heute in der Neurobiologie weltweit eingesetzt. Neben der Grundlagenforschung eröffnen sich dank der Optogenetik auch neue biomedizinische Perspektiven zur Gentherapie neurodegenerativer Krankheiten.
"Stellen Sie sich vor, wir könnten einzelne Zellen mit einer Art Fernbedienung von außen steuern", träumt Ralph Wieneke, Juniorgruppenleiter in der Zellulären Biochemie. Licht als Steuerungsquelle habe entscheidende Vorteile, schildert Institutsleiter Robert Tampé: "Es schadet Zellen nicht und kann schnell und sehr genau reguliert werden." Von ihrem Ziel ist die Arbeitsgruppe gar nicht so weit entfernt.
Um das komplizierte Geschehen in der Zelle entschlüsseln zu können, blockieren Forscher oft bestimmte Proteine oder Gene. Eine moderne und elegante Methode besteht darin, Lichtaktivierbare Moleküle als "Schalter" zu verwenden. Die Gruppe von Alexander Heckel entwickelt maßgeschneiderte Moleküle für Biologen, Biochemiker oder Mediziner.
Die Glühbirne hat ausgedient. Auch Energiesparlampen sind nur eine Übergangslösung. Große Hoffnungen richten sich auf organische Leuchtdioden, zumal man daraus auch großflächige und biegsame Displays und Flachbildschirme herstellen kann. Für eines der größten Probleme, das Ausbleichen der blauen Leuchtstoffe, findet man immer bessere Lösungen. Anwendungen, die heute noch wie Science-Fiction klingen, rücken damit in erreichbare Nähe.
Ein Laserblitz von unvorstellbarer Intensität pulverisiert im Labor ein Molekül. Wachsam zeichnen die Instrumente die Flugbahn und Geschwindigkeit jedes Bruchstücks auf. Physiker gewinnen daraus hochpräzise Informationen über die Molekülstruktur. Auch links- und rechtshändige Formen lassen sich unterscheiden.
Der Auflösung mikroskopischer Verfahren ist durch die Beugungsgrenze eine natürliche Schranke gesetzt. Strukturen, die näher als die halbe Wellenlänge des verwendeten Lichts zusammenliegen, können nicht aufgelöst werden. Doch Forscher haben einen Weg gefunden, diese Grenze zu umgehen. Die entstehenden Bilder ähneln dem Pointillismus in der Malerei.
"Mehr Licht!" – so lauteten, glaubt man seinem Arzt Carl Vogel, die letzten Worte des größten deutschen Dichters und Denkers Johann Wolfgang Goethe. Aus der Sicht der Fluoreszenzmikroskopie ist das kein guter Grundsatz. Die Kernidee der Lichtscheiben-Fluoreszenzmikroskopie (LSFM) liegt in der Macht der dunklen Seite. Anders gesagt: Sie folgt dem Prinzip, dass weniger manchmal viel mehr sein kann. Die schonende Beleuchtung empfindlicher Proben bei der LSFM birgt großes Potenzial für die moderne Zell- und Entwicklungsbiologie.
Die Freisetzung von Fluorchlorkohlenwasserstoffen (FCKW) in die Atmosphäre ist seit Inkrafttreten des Montreal-Protokolls zum Schutz der Ozonschicht im Jahr 1987 reglementiert. Aber die ozonzerstörenden Gase sind äußerst langlebig. Sie können erst in der Stratosphäre, also in Höhen oberhalb von etwa zehn Kilometern, durch kurzwelliges, energiereiches Sonnenlicht gespalten werden. Messungen der FCKW und ihrer Ersatzstoffe am Institut für Atmosphäre und Umwelt erlauben es, die Lebenszeiten dieser Substanzen zu bestimmen und damit auch ihr Potenzial, die Ozonschicht zu schädigen und zur Klimaerwärmung beizutragen. Sie stellen einen wichtigen Beitrag zur Klimaforschung dar.
Aus der Redaktion
(2015)
Vom 26. Juli bis 04. August 2015 veranstaltete die Akademie BURG FÜRSTENECK die 5. Hessische Schülerakademie für die Mittelstufe (Jgs. 7-9). Fünf Jahre Schülerakademie für die Mittelstufe – ein halbes Jahrzehnt Erfahrung und Entwicklung eines Projektes mit 12-15jährigen Schülerinnen und Schülern, hessischen Hochschullehrenden und Kulturschaffenden im Kontext von Engagement und überdurchschnittlicher Begabung!
p-process nucleosynthesis via proton-capture reactions in thermonuclear supernovae explosions
(2015)
Model calculations within the framework of the so-called γ process show an underproduction of the p nucleus with the highest isotopic abundace 92Mo. This discrepancy can be narrowed by taking into account the alternative production site of a type Ia supernova explosion. Here, the nucleus 92Mo can be produced by a sequence of proton-capture reactions. The amount of 92Mo nuclei produced via this reaction chain is most sensitive to the reactions 90Zr(p,γ) and 91Nb(p,γ). Both rates have to be investigated experimentally to study the impact of this nucleosynthesis aspect on the long-standing 92Mo-problem. We have already measured the proton-capture reaction on 90Zr using high-resolution in-beam γ-ray spectroscopy. In this contribution, we will present our preliminary results of the total cross sections as well as the partial cross sections. Furthermore, we plan to measure the 91Nb(p,γ) reaction soon. Due to the radioactive target material, the 91Nb nuclei have to be produced prior to the experiment. The current status of this production will be presented in this contribution.
Triangles of groups have been introduced by Gersten and Stallings. They are, roughly speaking, a generalization of the amalgamated free product of two groups and occur in the framework of Corson diagrams. First, we prove an intersection theorem for Corson diagrams. Then, we focus on triangles of groups. It has been shown by Howie and Kopteva that the colimit of a hyperbolic triangle of groups contains a non-abelian free subgroup. We give two natural conditions, each of which ensures that the colimit of a non-spherical triangle of groups either contains a non-abelian free subgroup or is virtually solvable.
After the mass-vaccination campaign during the influenza A (H1N1) 2009 pandemic, a significant increase in narcolepsy incidence was observed initially in Scandinavia, later in other European countries and recently also in Canada. Narcolepsy is a sleep disease caused by the loss of hypocretin-producing cells in the hypothalamus. Almost all narcolepsy patients carry the HLA-DQB1*0602 allele, giving a link to an autoimmune-mediated process.
Most of the observed narcolepsy cases were correlated to the vaccination with Pandemrix, the most frequently used vaccine in the EU, and a slight connection to Arepanrix was also detected, which was distributed in Canada. Both vaccines were adjuvanted with AS03, suggesting a possible link between AS03 and narcolepsy. No narcolepsy cases were detected with MF59-adjuvanted or non-adjuvanted influenza vaccines. Recent studies reported differences between Pandemrix and Arepanrix and suggested the vaccine rather than the adjuvant as a suspect for narcolepsy development following vaccination. In addition, in China an increase of narcolepsy cases was reported to occur in absence of vaccination. Possible factors and potential additive effects that may have triggered narcolepsy after the pandemic vaccination are being reviewed in this paper.
Fossils are often anatomically and functionally compared to extant model taxa such as Pan, Gorilla, Pongo and modern Homo sapiens to put the respective fossils into the (taxonomical) context of human evolution. Therefore, knowledge of extant hominid anatomy is necessary as well as knowledge of which traits differ between sexes, populations, (sub-)species and taxa, and whether these differences are pronounced enough to separate respective groups. Dental and mandibular structures have been of particular interest in many paleoanthropological studies, simply due to the fact that these morphological structures are most abundant in the human fossil record.
Various studies have addressed questions regarding taxonomy, variation and sexual dimorphism of hominid taxa with regard to dental and mandibular size. Tooth size, however, has almost exclusively referred to crown size, with little focus on root size. The focus on tooth crowns is partly due to roots being embedded in mandibular bone which makes access difficult. With the help of micro-computed tomography (μCT) it is now possible to render virtual 3D models of dental roots and measure these models without harming the original specimens. In addition, measurements are much more precise using μCT data than previous techniques such as 2D x-rays. The present study used 3D models of 231 (first, second and third) molars and 80 mandibles of 53 Pan troglodytes verus (consisting of individuals form the Tai and Liberia populations), 14 Gorilla sp. and 13 Pongo sp. individuals to investigate molar and mandibular sizes within, and between, taxa and populations with regard to sexual dimorphism, variability and taxonomical value. Molar root size was assessed by applying 7 measurements to each molar. Mandibular size was investigated using three different measurements: overall mandibular size, mandibular robusticity (at each molar position) and 15 linear measurements. Overall mandibular size and root measurements were used to investigate the dental and mandibular size relationship. Furthermore, based on data acquired from great apes, how well fossil mandibles (including their dentition) of Australopithecus africanus, Paranthropus sp. and Homo sp. match one or multiple extant hominid taxa was examined Overall, molar root and mandibular metrics are suitable to differentiate between sexes, populations and taxa. Investigation of 40 (21 molar and 19 mandibular) different measure ments resulted in five common characteristics among Pan, Gorilla and Pongo only: firstly, molar root size sequence in root volume and root surface area (M3 < M1 < M2). Secondly, M2 as the molar with the largest cervical area, root volume, root surface area and mesial root lengths and thirdly, mandibular robusticity is larger in females than in males, yet the difference is not signifficant. Fourthly, mandibular length and premolar width are sexually dimorphic and fifthly, the best factors to discriminate between taxa are bicondyle width and molar root length. There is no generalized answer to the question which molar and/or measurement (dental or mandibular) is best to discriminate between sex or taxa in extant hominids. Moreover, size relationships differ among taxa, depending on the measurement. The overall trend, however, is that Pan is the taxa with the smallest, and Gorilla the largest, mean values. Among Pan populations, Liberian chimpanzees tend to have larger average values compared to Tai chimpanzees, with the exception of mandibular robusticity. The highest percentage of sexual dimorphic measurements is found in Pongo, yet only half of the measurements are statistically different between sexes. African apes are less sexually dimorphic compared to Pongo, and surprisingly, Gorilla is only slightly more dimorphic than Pan. The study also shows that statements and conclusions relating to \mandibular size" should not be generalized: whereas male and female Pongo do not differ significantly in overall mandibular size, they do differ in linear mandibular measurements. Moreover, Gorilla has the overall largest mandible, yet robusticity is higher in Pan, as are some linear measurements. Sexual dimorphism in overall mandibular size does not seem to reflect body mass dimorphism, whereas mandibular size appears to be related to body mass. The same was previously proposed for mandibular robusticity, yet Pan, the smallest taxa, has the most robust mandibular corpus (> Gorilla > Pongo). A substantial amount of molar measurements that positively correlate with (overall) mandibular size was found, but in African apes only. This contrasts with former studies which found no, or weak, correlations between dental and mandibular sizes. Given that the percentage of correlation is highest in Pan, and not present in Pongo, it is proposed that small jaws feature small teeth, rather than large jaws feature large teeth. This proposition assumes a size-threshold from which, when reached, dental and mandibular sizes no longer correlate, as has been previously proposed for the relationship between canine size and mandibular breadth. This assumption is further supported by the fact that the smaller and more robust Tai population shows more significant correlation compared to the less robust and larger Liberia population. Results show that fossil metrics are similar to one or multiple extant hominid taxa, depending on the measurement (dental or mandibular) used for comparison. Subsequently, the assignment to a specific sex depends on the earlier selected extant model taxa. Therefore the study questions whether choosing one model taxa for one fossil, or taxonomical group, is advisable. This study is the first to extensively investigate molar root size in extant hominids and to broadly describe differences in molar root sizes among and between taxa and therefore provides a solid database for future studies. The same applies to mandibular robusticity which has not been investigated as systematically or to such a great extent as in this work. The study specifically shows how complex the search for taxa or sex differentiating molar root and/or mandibular measurements is. Subsequently it shows that generalizations in relation to taxonomical values and statements about sexual dimorphism can be misleading.
In addition, the study contributes to the understanding of intra- and inter-population differences within Pan torglodytes verus. Furthermore, it could be demonstrated that results of a subspecies sample very likely depend on the sample composition, i.e. whether the sample consists of individuals from one or more populations. This study serves as a database for further studies investigating molar root sizes in great apes, whether these studies are investigating various relationships between taxa, population or sex, or as database to investigate functional adaptations or to examine mandibular robusticity and molar root relationships.
Biomedical data obtained during cell experiments, laboratory animal research, or human studies often display a complex distribution. Statistical identification of subgroups in research data poses an analytical challenge. Here were introduce an interactive R-based bioinformatics tool, called “AdaptGauss”. It enables a valid identification of a biologically-meaningful multimodal structure in the data by fitting a Gaussian mixture model (GMM) to the data. The interface allows a supervised selection of the number of subgroups. This enables the expectation maximization (EM) algorithm to adapt more complex GMM than usually observed with a noninteractive approach. Interactively fitting a GMM to heat pain threshold data acquired from human volunteers revealed a distribution pattern with four Gaussian modes located at temperatures of 32.3, 37.2, 41.4, and 45.4 °C. Noninteractive fitting was unable to identify a meaningful data structure. Obtained results are compatible with known activity temperatures of different TRP ion channels suggesting the mechanistic contribution of different heat sensors to the perception of thermal pain. Thus, sophisticated analysis of the modal structure of biomedical data provides a basis for the mechanistic interpretation of the observations. As it may reflect the involvement of different TRP thermosensory ion channels, the analysis provides a starting point for hypothesis-driven laboratory experiments.
The increasing number of casting shows and talent contests in the media over the past years suggests a public interest in rating the quality of vocal performances. In many of these formats, laymen alongside music experts act as judges. Whereas experts' judgments are considered objective and reliable when it comes to evaluating singing voice, little is known about laymen's ability to evaluate peers. On the one hand, layman listeners–who by definition did not have any formal training or regular musical practice–are known to have internalized the musical rules on which singing accuracy is based. On the other hand, layman listeners' judgment of their own vocal skills is highly inaccurate. Also, when compared with that of music experts, their level of competence in pitch perception has proven limited. The present study investigates laypersons' ability to objectively evaluate melodies performed by untrained singers. For this purpose, laymen listeners were asked to judge sung melodies. The results were compared with those of music experts who had performed the same task in a previous study. Interestingly, the findings show a high objectivity and reliability in layman listeners. Whereas both the laymen's and experts' definition of pitch accuracy overlap, differences regarding the musical criteria employed in the rating task were evident. The findings suggest that the effect of expertise is circumscribed and limited and supports the view that laypersons make trustworthy judges when evaluating the pitch accuracy of untrained singers.
It is now accepted that heart failure (HF) is a complex multifunctional disease rather than simply a hemodynamic dysfunction. Despite its complexity, stressed cardiomyocytes often follow conserved patterns of structural remodelling in order to adapt, survive, and regenerate. When cardiac adaptations cannot cope with mechanical, ischemic, and metabolic loads efficiently or become chronically activated, as, for example, after infection, then the ongoing structural remodelling and dedifferentiation often lead to compromised pump function and patient death. It is, therefore, of major importance to understand key events in the progression from a compensatory left ventricular (LV) systolic dysfunction to a decompensatory LV systolic dysfunction and HF. To achieve this, various animal models in combination with an “omics” toolbox can be used. These approaches will ultimately lead to the identification of an arsenal of biomarkers and therapeutic targets which have the potential to shape the medicine of the future.
The Sonic Hedgehog (SHH) pathway plays a central role in the developing mammalian CNS. In our study, we aimed to investigate the spatiotemporal SHH pathway expression pattern in human fetal brains. We analyzed 22 normal fetal brains for Shh, Patched, Smoothened, and Gli1-3 expression by immunohistochemistry. In the telencephalon, strongest expression of Shh, Smoothened, and Gli2 was found in the cortical plate (CP) and ventricular zone. Patched was strongly upregulated in the ventricular zone and Gli1 in the CP. In the cerebellum, SHH pathway members were strongly expressed in the external granular layer (EGL). SHH pathway members significantly decreased over time in the ventricular and subventricular zone and in the cerebellar EGL, while increasing levels were found in more superficial telencephalic layers. Our findings show that SHH pathway members are strongly expressed in areas important for proliferation and differentiation and indicate a temporal expression gradient in telencephalic and cerebellar layers probably due to decreased proliferation of progenitor cells and increased differentiation. Our data about the spatiotemporal expression of SHH pathway members in the developing human brain serves as a base for the understanding of both normal and pathological CNS development.
Psoriatic arthritis (PsA) is a chronic inflammatory arthritis associated with psoriasis and, despite the larger estimated heritability for PsA, the majority of genetic susceptibility loci identified to date are shared with psoriasis. Here, we present results from a case-control association study on 1,962 PsA patients and 8,923 controls using the Immunochip genotyping array. We identify eight loci passing genome-wide significance, secondary independent effects at three loci and a distinct PsA-specific variant at the IL23R locus. We report two novel loci and evidence of a novel PsA-specific association at chromosome 5q31. Imputation of classical HLA alleles, amino acids and SNPs across the MHC region highlights three independent associations to class I genes. Finally, we find an enrichment of associated variants to markers of open chromatin in CD8(+) memory primary T cells. This study identifies key insights into the genetics of PsA that could begin to explain fundamental differences between psoriasis and PsA.
Objective: To evaluate two ultrafast cone-beam CT (UF-CBCT) imaging protocols with different acquisition and injection parameters regarding image quality and required contrast media during image-guided hepatic transarterial chemoembolization (TACE).
Methods: In 80 patients (male: 46, female: 34; mean age: 56.8 years; range: 33–83) UF-CBCT was performed during TACE for intraprocedural guidance. Imaging was performed using two ultrafast CBCT acquisition protocols with different acquisition and injection parameters (imaging protocol 1: acquisition time 2.54 s, and contrast 6 mL with 3 s delay; imaging protocol 2: acquisition time 2.72 s, and contrast 7 mL with 6 s delay). Image evaluation was performed with both qualitative and quantitative methods. Contrast injection volume and dose parameters were compared using values from the literature.
Results: Imaging protocol 2 provided significantly better (P < 0.05) image quality than protocol 1 at the cost of slightly higher contrast load and patient dose. Imaging protocol 1 provided good contrast perfusion but it mostly failed to delineate the tumors (P < 0.05). On the contrary, imaging protocol 2 showed excellent enhancement of hepatic parenchyma, tumor, and feeding vessels.
Conclusion: Tumor delineation, visualization of hepatic parenchyma, and feeding vessels are clearly possible using imaging protocol 2 with ultrafast CBCT imaging. A reduction of required contrast volume and patient dose were achieved due to the ultrafast CBCT imaging.
Animal experiments report contradictory findings on the presence of a behavioural and neuronal anisotropy exhibited in vertical and horizontal capabilities of spatial orientation and navigation. We performed a pointing experiment in humans on the imagined 3-D direction of the location of various invisible goals that were distributed horizontally and vertically in a familiar multilevel hospital building. The 21 participants were employees who had worked for years in this building. The hypothesis was that comparison of the experimentally determined directions and the true directions would reveal systematic inaccuracy or dimensional anisotropy of the localizations. The study provides first evidence that the internal representation of a familiar multilevel building was distorted compared to the dimensions of the true building: vertically 215% taller and horizontally 51% shorter. This was not only demonstrated in the mathematical reconstruction of the mental model based on the analysis of the pointing experiments but also by the participants’ drawings of the front view and the ground plan of the building. Thus, in the mental model both planes were altered in different directions: compressed for the horizontal floor plane and stretched for the vertical column plane. This could be related to human anisotropic behavioural performance of horizontal and vertical navigation in such buildings.
Abstract: Fine-scale temporal organization of cortical activity in the gamma range (∼25–80Hz) may play a significant role in information processing, for example by neural grouping ('binding') and phase coding. Recent experimental studies have shown that the precise frequency of gamma oscillations varies with input drive (e.g. visual contrast) and that it can differ among nearby cortical locations. This has challenged theories assuming widespread gamma synchronization at a fixed common frequency. In the present study, we investigated which principles govern gamma synchronization in the presence of input-dependent frequency modulations and whether they are detrimental for meaningful input-dependent gamma-mediated temporal organization. To this aim, we constructed a biophysically realistic excitatory-inhibitory network able to express different oscillation frequencies at nearby spatial locations. Similarly to cortical networks, the model was topographically organized with spatially local connectivity and spatially-varying input drive. We analyzed gamma synchronization with respect to phase-locking, phase-relations and frequency differences, and quantified the stimulus-related information represented by gamma phase and frequency. By stepwise simplification of our models, we found that the gamma-mediated temporal organization could be reduced to basic synchronization principles of weakly coupled oscillators, where input drive determines the intrinsic (natural) frequency of oscillators. The gamma phase-locking, the precise phase relation and the emergent (measurable) frequencies were determined by two principal factors: the detuning (intrinsic frequency difference, i.e. local input difference) and the coupling strength. In addition to frequency coding, gamma phase contained complementary stimulus information. Crucially, the phase code reflected input differences, but not the absolute input level. This property of relative input-to-phase conversion, contrasting with latency codes or slower oscillation phase codes, may resolve conflicting experimental observations on gamma phase coding. Our modeling results offer clear testable experimental predictions. We conclude that input-dependency of gamma frequencies could be essential rather than detrimental for meaningful gamma-mediated temporal organization of cortical activity.
Author Summary: Almost 350 years ago the physicist and polymath Christiaan Huygens first observed the synchronization between two pendulum clocks attached to a common support. Since then synchronization has been recognized as a universal phenomenon from astronomy to biology. The phase-locking (synchrony) and the phase-relation between the two pendulums are determined by two principal forces: the synchronization force exerted over the connection and the tendency to desynchronize due to frequency (speed) differences. We propose that gamma synchronization (25–80Hz) among oscillating cortical neurons in the brain can be understood according to the same principles—like a field of many connected pendula—with the critical addition that input changes the frequency of gamma oscillations, as shown by recent experimental studies. It has been assumed that input-dependent changes in oscillation frequency are detrimental for a meaningful role of gamma synchronization in neural processing. To the contrary, our theoretical analysis demonstrates that because input can change the frequency of the oscillation, phase-locking and phase-relations among neurons relate systematically to input. By analogy, it is because a local push to a pendulum will change its frequency, that resulting changes in phase-locking and phase-relation among the pendula can be used to derive the external force applied.
In vivo long-term monitoring of circulating tumor cells fluctuation during medical interventions
(2015)
The goal of this research was to study the long-term impact of medical interventions on circulating tumor cell (CTC) dynamics. We have explored whether tumor compression, punch biopsy or tumor resection cause dissemination of CTCs into peripheral blood circulation using in vivo fluorescent flow cytometry and breast cancer-bearing mouse model inoculated with MDA-MB-231-Luc2-GFP cells in the mammary gland. Two weeks after tumor inoculation, three groups of mice were the subject of the following interventions: (1) tumor compression for 15 minutes using 400 g weight to approximate the pressure during mammography; (2) punch biopsy; or (3) surgery. The CTC dynamics were determined before, during and six weeks after these interventions. An additional group of tumor-bearing mice was used as control and did not receive an intervention. The CTC dynamics in all mice were monitored weekly for eight weeks after tumor inoculation. We determined that tumor compression did not significantly affect CTC dynamics, either during the procedure itself (P = 0.28), or during the 6-week follow-up. In the punch biopsy group, we observed a significant increase in CTC immediately after the biopsy (P = 0.02), and the rate stayed elevated up to six weeks after the procedure in comparison to the tumor control group. The CTCs in the group of mice that received a tumor resection disappeared immediately after the surgery (P = 0.03). However, CTC recurrence in small numbers was detected during six weeks after the surgery. In the future, to prevent these side effects of medical interventions, the defined dynamics of intervention-induced CTCs may be used as a basis for initiation of aggressive anti-CTC therapy at time-points of increasing CTC number.
Network graphs have become a popular tool to represent complex systems composed of many interacting subunits; especially in neuroscience, network graphs are increasingly used to represent and analyze functional interactions between multiple neural sources. Interactions are often reconstructed using pairwise bivariate analyses, overlooking the multivariate nature of interactions: it is neglected that investigating the effect of one source on a target necessitates to take all other sources as potential nuisance variables into account; also combinations of sources may act jointly on a given target. Bivariate analyses produce networks that may contain spurious interactions, which reduce the interpretability of the network and its graph metrics. A truly multivariate reconstruction, however, is computationally intractable because of the combinatorial explosion in the number of potential interactions. Thus, we have to resort to approximative methods to handle the intractability of multivariate interaction reconstruction, and thereby enable the use of networks in neuroscience. Here, we suggest such an approximative approach in the form of an algorithm that extends fast bivariate interaction reconstruction by identifying potentially spurious interactions post-hoc: the algorithm uses interaction delays reconstructed for directed bivariate interactions to tag potentially spurious edges on the basis of their timing signatures in the context of the surrounding network. Such tagged interactions may then be pruned, which produces a statistically conservative network approximation that is guaranteed to contain non-spurious interactions only. We describe the algorithm and present a reference implementation in MATLAB to test the algorithm’s performance on simulated networks as well as networks derived from magnetoencephalographic data. We discuss the algorithm in relation to other approximative multivariate methods and highlight suitable application scenarios. Our approach is a tractable and data-efficient way of reconstructing approximative networks of multivariate interactions. It is preferable if available data are limited or if fully multivariate approaches are computationally infeasible.
The bug Gyaclavator kohlsi Wappler, Guilbert, Wedmann et Labandeira, gen. et sp. nov., represents a new extinct genus of lace bugs (Insecta: Heteroptera: Tingidae) occurring in latest early Eocene deposits of the Green River Formation, from the southern Piceance Basin of Northwestern Colorado, in North America. Gyaclavator can be placed within the Tingidae with certainty, perhaps it is sistergroup to Cantacaderinae. If it belongs to Cantacaderinae, it is the first fossil record of this group for North America. Gyaclavator has unique, conspicuous antennae bearing a specialized, highly dilated distiflagellomere, likely important for intra- or intersex reproductive competition and attraction. This character parallels similar antennae in leaf-footed bugs (Coreidae), and probably is associated with a behavioral convergence as well.
At the sensor level many aspects, such as spectral power, functional and effective connectivity as well as relative-power-ratio ratio (RPR) and spatial resolution have been comprehensively investigated through both electroencephalography (EEG) and magnetoencephalography (MEG). Despite this, differences between both modalities have not yet been systematically studied by direct comparison. It remains an open question as to whether the integration of EEG and MEG data would improve the information obtained from the above mentioned parameters. Here, EEG (64-channel system) and MEG (275 sensor system) were recorded simultaneously in conditions with eyes open (EO) and eyes closed (EC) in 29 healthy adults. Spectral power, functional and effective connectivity, RPR, and spatial resolution were analyzed at five different frequency bands (delta, theta, alpha, beta and gamma). Networks of functional and effective connectivity were described using a spatial filter approach called the dynamic imaging of coherent sources (DICS) followed by the renormalized partial directed coherence (RPDC). Absolute mean power at the sensor level was significantly higher in EEG than in MEG data in both EO and EC conditions. At the source level, there was a trend towards a better performance of the combined EEG+MEG analysis compared with separate EEG or MEG analyses for the source mean power, functional correlation, effective connectivity for both EO and EC. The network of coherent sources and the spatial resolution were similar for both the EEG and MEG data if they were analyzed separately. Results indicate that the combined approach has several advantages over the separate analyses of both EEG and MEG. Moreover, by a direct comparison of EEG and MEG, EEG was characterized by significantly higher values in all measured parameters in both sensor and source level. All the above conclusions are specific to the resting state task and the specific analysis used in this study to have general conclusion multi-center studies would be helpful.
Adult neurogenesis is frequently studied in the mouse hippocampus. We examined the morphological development of adult-born, immature granule cells in the suprapyramidal blade of the septal dentate gyrus over the period of 7–77 days after mitosis with BrdU-labeling in 6-weeks-old male Thy1-GFP mice. As Thy1-GFP expression was restricted to maturated granule cells, it was combined with doublecortin-immunolabeling of immature granule cells. We developed a novel classification system that is easily applicable and enables objective and direct categorization of newborn granule cells based on the degree of dendritic development in relation to the layer specificity of the dentate gyrus. The structural development of adult-generated granule cells was correlated with age, albeit with notable differences in the time course of development between individual cells. In addition, the size of the nucleus, immunolabeled with the granule cell specific marker Prospero-related homeobox 1 gene, was a stable indicator of the degree of a cell's structural maturation and could be used as a straightforward parameter of granule cell development. Therefore, further studies could employ our doublecortin-staging system and nuclear size measurement to perform investigations of morphological development in combination with functional studies of adult-born granule cells. Furthermore, the Thy1-GFP transgenic mouse model can be used as an additional investigation tool because the reporter gene labels granule cells that are 4 weeks or older, while very young cells could be visualized through the immature marker doublecortin. This will enable comparison studies regarding the structure and function between young immature and older matured granule cells.
Background: From 2008–2013, the European indication for panitumumab required that patients' tumor KRAS exon 2 mutation status was known prior to starting treatment. To evaluate physician awareness of panitumumab prescribing information and how physicians prescribe panitumumab in patients with metastatic colorectal cancer (mCRC), two European multi-country, cross-sectional, observational studies were initiated in 2012: a physician survey and a medical records review. The first two out of three planned rounds for each study are reported.
Methods: The primary objective in the physician survey was to estimate the prevalence of KRAS testing, and in the medical records review, it was to evaluate the effect of test results on patterns of panitumumab use. The medical records review study also included a pathologists' survey.
Results: In the physician survey, nearly all oncologists (299/301) were aware of the correct panitumumab indication and the need to test patients' tumor KRAS status before treatment with panitumumab. Nearly all oncologists (283/301) had in the past 6 months of clinical practice administered panitumumab correctly to mCRC patients with wild-type KRAS status. In the medical records review, 97.5% of participating oncologists (77/79) conducted a KRAS test for all of their patients prior to prescribing panitumumab. Four patients (1.3%) did not have tumor KRAS mutation status tested prior to starting panitumumab treatment. Approximately one-quarter of patients (85/306) were treated with panitumumab and concurrent oxaliplatin-containing chemotherapy; of these, 83/85 had confirmed wild-type KRAS status prior to starting panitumumab treatment. All 56 referred laboratories that participated used a Conformité Européenne-marked or otherwise validated KRAS detection method, and nearly all (55/56) participated in a quality assurance scheme.
Conclusions: There was a high level of knowledge amongst oncologists around panitumumab prescribing information and the need to test and confirm patients' tumors as being wild-type KRAS prior to treatment with panitumumab, with or without concurrent oxaliplatin-containing therapy.