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The Invertebrate section of the Museum of Zoology QCAZ at the Pontifical Catholic University of Ecuador in Quito maintains nearly two million curated specimens, and comprises Ecuador's largest collection of native taxa. We review 1902 type specimens from 6 subspecies and 320 species in 121 genera and 42 families, currently kept in the Museum. The list includes 116 holotypes, 10 allotypes, 1774 paratypes and 2 neoparatypes. The collection of type specimens is particularly strong in the Coleoptera (family Carabidae and Staphylinidae) and Hymenoptera. However, other insect orders such as Diptera and Lepidoptera and non-insect arthropods such as Acari, Aranea and Scorpiones, are moderately represented in the collection. This report provides original data from labels of every type specimen record. An analysis of the geographic distribution of type localities showed that collection sites are clustered geographically with most of them found. towards the northern region of Ecuador, in Pichincha, Cotopaxi and Napo provinces. Sites are mainly located in highly accessible areas near highways and towns. Localities with a high number of type species include the cloud forest reserve Bosque Integral Otonga and Parque Nacional Yasunf in the Amazon rainforest near PUCE's Yasuni Scientific Station. Type localities are not well represented in the Ecuadorian National System of Protected Areas. Future fieldwork Sllould include. localities in the southern region of Ecuador but also target less accessible areas not located near highways or towns. We discuss the value of the collection as a source of information for conservation and biodiversity policies in Ecuador.
Wendelin Schmidt-Dengler [...] gilt als Erneuerer der österreichischen Germanistik. Er war der Leiter des Instituts für Germanistik der Universität Wien und des Literaturarchivs der Österreichischen Nationalbibliothek. Er war Ehrenvorsitzender der Heimito von Doderer-Gesellschaft und wissenschaftlicher Leiter des Thomas-Bernhard-Privatarchivs. Er hat die Werke von Heimito von Doderer, Fritz von Herzmanovsky-Orlando, Albert Drach und Thomas Bernhard in kommentierten werkkritischen Ausgaben neu heraugegeben.
Introduction: Lymphocyte infiltration (LI) is often seen in breast cancer but its importance remains controversial. A positive correlation of human epidermal growth factor receptor 2 (HER2) amplification and LI has been described, which was associated with a more favorable outcome. However, specific lymphocytes might also promote tumor progression by shifting the cytokine milieu in the tumor.
Methods: Affymetrix HG-U133A microarray data of 1,781 primary breast cancer samples from 12 datasets were included. The correlation of immune system-related metagenes with different immune cells, clinical parameters, and survival was analyzed.
Results: A large cluster of nearly 600 genes with functions in immune cells was consistently obtained in all datasets. Seven robust metagenes from this cluster can act as surrogate markers for the amount of different immune cell types in the breast cancer sample. An IgG metagene as a marker for B cells had no significant prognostic value. In contrast, a strong positive prognostic value for the T-cell surrogate marker (lymphocyte-specific kinase (LCK) metagene) was observed among all estrogen receptor (ER)-negative tumors and those ER-positive tumors with a HER2 overexpression. Moreover ER-negative tumors with high expression of both IgG and LCK metagenes seem to respond better to neoadjuvant chemotherapy.
Conclusions: Precise definitions of the specific subtypes of immune cells in the tumor can be accomplished from microarray data. These surrogate markers define subgroups of tumors with different prognosis. Importantly, all known prognostic gene signatures uniformly assign poor prognosis to all ER-negative tumors. In contrast, the LCK metagene actually separates the ER-negative group into better or worse prognosis.
Weimarer Beiträge 55/2009
(2009)
Die Weimarer Beiträge - seit ihrer Einstellung durch den Aufbauverlag 1991 vom Passagen Verlag herausgegeben - ist eine der renommiertesten Literatur- und Kulturzeitschriften der ehemaligen DDR. Durch ihren interdisziplinären Ansatz, der auch allgemeine kulturelle, ästhetische und politische Überlegungen einbezieht, trägt sie zu einer Einbindung der deutschsprachigen Kulturwissenschaften in die internationale Diskussion bei.
In over 100 genera of tropical angiosperms, one or more species possess specialised structures for housing ants. The longevity and intimacy of these associations has often facilitated an increasing specialisation of both the ants and the plants, leading to a number of highly specific and obligate symbioses. Early literature contained only few anecdotal reports of the ant genus Cladomyrma WHEELER inhabiting (unidentified) plants. This work presents the new findings on Cladomyrma and its host plants that accumulated over the last two decades. My studies of Cladomyrma reveal that there is a largely overlooked community of south-east Asian plant-ants and their associated plants. Currently the genus consists of at least 12 species. Cladomyrma has been thought to be restricted to the ever-wet part of the West Malesian floristic region, comprising the Malay Peninsula, Borneo, and Sumatra, but recent collections from Thailand and Vietnam indicate that species of the genus penetrate the seasonal tropical forests of Continental Asia. Cladomyrma inhabits 24 plant species belonging to a surprisingly extensive range of plant taxa: Callerya, Saraca, Spatholobus (Fabaceae), Crypteronia (Crypteroniaceae), Drypetes (Putranjivaceae), Ryparosa (Achariaceae), Strychnos (Loganiaceae), Neonauclea (Rubiaceae), Luvunga (Rutaceae) and Sphenodesme (Verbenaceae). In terms of taxonomic diversity on the genus and family level the range of hosts utilised by Cladomyrma is one of the broadest ever recorded for any live stem-nesting plant-ant lineage worldwide. This work provides a species-level overview of all Cladomyrma host plants known from Borneo, the Malay Peninsula and Sumatra, including descriptions of ant-housing structures (domatia), ant inhabitant identity, onset of colonisation during plant ontogeny, nest structure, occupancy rate, and considerations of results obtained from herbarium specimens. Both the regularity of ant association and the degree of morphological specialisation toward myrmecophytism are assessed. The behavioural traits of Cladomyrma are compatible with traits exhibited by other protective plant-ants. This work demonstrates that all species of Cladomyrma investigated (dianeae, maschwitzi, yongi, petalae) confer antiherbivore protection to young leaves of its host. The ants also attack and repell or kill herbivorous insect larvae encountered on young foliage. Cleaning behaviour appears to be a trait shared by all members of the genus, and the two species tested (maschwitzi, petalae) successfully removed termite eggs experimentally placed onto young leaves. Another trait common to all known species of the genus is that the ants preferentially patrol young shoots and leaves ('neophily'). These behavioural traits of Cladomyrma likely reduce stem damage and pathogenic infection of their host. The ants prune encroaching vegetation (tested in dianeae maschwitzi, petalae, yongi, observed in crypteroniae) and attack paper tape used to mark host plants (observed in andrei, dianeae, hobbyi, nudidorsalis, maschwitzi, yongi, petalae). If these traits combined translate into a better reproductive success of the hosts has yet to be verified. Evidence for lifetime fitness benefits is particularly difficult to quantify for the long-lived woody host plants of Cladomyrma. The predominant food source of Cladomyrma appears to be the honeydew of scale insects (Coccidae and Pseudococcidae) which the ants tend inside their nest cavities. Observations on scale insect acquisition by Cladomyrma foundress queens show that hemipteran trophobionts are not transported by the queens on their nuptial flight but they nevertheless arrive on the host plant independently of the ants. Entry into nest chambers is facilitated by small holes kept open by the foundress queen. Most Cladomyrma species have been recorded from only one or two (three) host plant species (andrei, crypteroniae, hobbyi, maschwitzi, nudidorsalis, scopulosa, yongi), but two species, Cladomyrma petalae and C. dianeae, are more catholic in their host usage; the first being a 'generalist' plant-ant colonising hosts across a broad taxonomic range, the second inhabiting several members of the genus Neonauclea. First results of host-choice experiments with C. petalae are presented and the potential mechanisms promoting host specificity are discussed. My studies of the Cladomyrma/plant associations indicate that codiversification and host shifts or host expansions, rather than cospeciation, shape the pattern of species interactions in this system. Finally, I propose a scenario in which three key traits of Cladomyrma –access to live stems, utilisation of indirect food rewards via trophobionts and 'neophily'– are hypothesised to favour niche differentiation and the acquisition of new hosts over evolutionary time.
Anaphylactic shock is a severe allergic reaction involving multiple organs including the bronchial and cardiovascular system. Most anaphylactic mediators, like platelet-activating factor (PAF), histamine, and others, act through G protein – coupled receptors, which are linked to the heterotrimeric G proteins Gq /G 11 , G12/G13 , and Gi . The role of downstream signaling pathways activated by anaphylactic mediators in defi ned organs during anaphylactic reactions is largely unknown. Using genetic mouse models that allow for the conditional abrogation of G q /G 11 - and G 12 /G 13 -mediated signaling pathways by inducible Cre/loxP-mediated mutagenesis in endothelial cells (ECs), we show that Gq /G11 -mediated signaling in ECs is required for the opening of the endothelial barrier and the stimulation of nitric oxide formation by various infl ammatory mediators as well as by local anaphylaxis. The systemic effects of anaphylactic mediators like histamine and PAF, but not of bacterial lipopolysaccharide (LPS), are blunted in mice with endothelial G alpha q/G alpha 11 deficiency. Mice with endothelium-specific G alpha q /G alpha 11 deficiency, but not with G alpha 12/G alpha 13 deficiency, are protected against the fatal consequences of passive and active systemic anaphylaxis. This identifies endothelial Gq/G11 -mediated signaling as a critical mediator of fatal systemic anaphylaxis and, hence, as a potential new target to prevent or treat anaphylactic reactions.
Changes in the balance of cholesterol absorption and synthesis and moderately elevated plasma plant sterols have been suggested to be atherogenic. Measuring cholestanol, lathosterol, campesterol, and sitosterol, we investigated the relationships of cholesterol metabolism and plasma plant sterols with the severity of coronary artery disease (CAD) in 2,440 participants of the Ludwigshafen Risk and Cardiovascular health (LURIC) study. The coronary status was determined by angiography, and the severity of CAD was assessed by the Friesinger Score (FS). An increase in the ratio of cholestanol to cholesterol was associated with high FS (P = 0.006). In contrast, a high ratio of lathosterol to cholesterol went in parallel with low FS (P < 0.001). Whereas the campesterol to cholesterol ratio significantly correlated with the FS (P = 0.026), the relationship of the sitosterol to cholesterol ratio with the FS did not reach statistical significance in the whole group. Increased campesterol, sitosterol, and cholestanol to lathosterol ratios were associated high FS (P < 0.001). To conclude, there is a modest association of high cholesterol absorption and low cholesterol synthesis with an increased severity of CAD. An atherogenic role of plasma plant sterols themselves, however, seems unlikely in subjects without sitosterolaemia.
We developed a Monte Carlo event generator for production of nucleon configurations in complex nuclei consistently including effects of nucleon–nucleon (NN) correlations. Our approach is based on the Metropolis search for configurations satisfying essential constraints imposed by short- and long-range NN correlations, guided by the findings of realistic calculations of one- and two-body densities for medium-heavy nuclei. The produced event generator can be used for Monte Carlo (MC) studies of pA and AA collisions. We perform several tests of consistency of the code and comparison with previous models, in the case of high energy proton–nucleus scattering on an event-by-event basis, using nucleus configurations produced by our code and Glauber multiple scattering theory both for the uncorrelated and the correlated configurations; fluctuations of the average number of collisions are shown to be affected considerably by the introduction of NN correlations in the target nucleus. We also use the generator to estimate maximal possible gluon nuclear shadowing in a simple geometric model.
Based on a study of the characters used to define it, the genus Euphoriopsis Casey is placed in synonymy with Euphoria Burmeister. Euphoria punicea Janson is placed in synonymy with Euphoria steinheili Janson. Morphological characters supporting the synonymies, and the species' distributions and biological data are reviewed.
In plants, a family of more than 20 heat stress transcription factors (Hsf) controls the expression of heat stress (hs) genes. There is increasing evidence for the functional diversification between individual members of the Hsf family fulfilling distinct roles in response to various environmental stress conditions and developmental signals. In response to hs, accumulation of both heat stress proteins (Hsp) and Hsfs is induced. In tomato, the physical interaction between the constitutively expressed HsfA1 and the hs-inducible HsfA2 results in synergistic transcriptional activation (superactivation) of hs gene expression. Here, we show that the interaction is strikingly specific and not observed with other class A Hsfs. Hetero-oligomerization of the two-component Hsfs is preferred to homo-oligomerization, and each Hsf in the HsfA1/HsfA2 hetero-oligomeric complex has its characteristic contribution to its function as superactivator. Distinct regions of the oligomerization domain are responsible for specific homo- and hetero-oligomeric interactions leading to the formation of hexameric complexes. The results are summarized in a model of assembly and function of HsfA1/A2 superactivator complexes in hs gene regulation.
Immunsuppressiva sind essentiell für die allogene Organtransplantation. Graff et al konnten in drei vorangegangenen Studien zeigen, dass Immunsuppressiva zu einer verstärkten Thrombozytenaktivierung führen. Diese ist für die verschiedenen Substanzen unterschiedlich stark ausgeprägt. Eine verstärkte Thrombozytenaktivierung könnte zu vermehrten kardiovaskulären Ereignissen führen. Insbesondere bei nierentransplantierten Patienten ist das kardiovaskuläre Risiko ohnehin deutlich erhöht. Es stellt sich die Frage ob diese medikamentös induzierte Plättchenaktivierung als Ko-Faktor kardiovaskulärer Ereignisse bei nierentransplantierten anzusehen ist. Im Vorfeld dieser Studie wurden in den Studien NTX, RAPA und PLANT bei insgesamt 176 nierentransplantierten Patienten mit einer Mono-Immunsuppression flowzytometrische Plättchenfunktionsmessungen durchgeführt, dabei wurden insbesondere der Degranulationsmarker CD62 und der aktivierte GP IIb/IIIa-Rezeptor PAC-1 gemessen. Diese Ergebnisse wurden in Relation zum Mittelwert der jeweiligen Kontrollgruppen gesetzt: Messwert(Patient) / Mittelwert(Gesunde_Kontrolle) Diese relativen Plättchenfunktionswerte waren zwischen den Studien vergleichbar. Des Weiteren wurden epidemiologische Eckdaten und klinische Endpunkte bis zu 5 Jahre nach der Thrombozytenmessung erfasst, im Mittel 3,7 Jahre. Aufgrund des Studiendesigns der vorangegangenen Studien wurde hier ein Kollektiv mit relativ niedrigem kardiovaskulärem Risiko untersucht, jedoch sollte durch diese Reduktion klassischer Risikofaktoren der Einfluss der Plättchenaktivität besser sichtbar sein. Die retrospektive Analyse untersuchte ob die Plättchenfunktionsparameter CD62 und PAC-1 als prädiktiver Marker für kardiovaskuläre Ereignisse geeignet sind. Insgesamt traten seit den Messungen 21 kardiovaskuläre Ereignisse auf, davon 9 akute. Es gab keine signifikanten Unterschiede zwischen den Werten bei Patienten mit Ereignissen und denen ohne Ereignis: Bei CD62 (baseline) lag der Mittelwert bei 2,82±1,9 mit Ereignis vs. 2,73±1,47 ohne, für PAC-1 bei 1,76 ±1,97 vs. 1,93±1,53. Nach Aktivierung mit TRAP lag der Mittelwert für CD62 bei Ereignispatienten bei 1,57±0,88 vs. 1,76±0,83, für PAC-1 bei 1,56±1,65 vs. 1,44±1,04. In einem weiteren Schritt wurden die Patienten nach dem Ausmaß der Plättchenaktivierung klassifiziert, als Cut-Off-Werte wurden die Mittelwerte und Mediane der jeweiligen Plättchenfunktion aller Patienten gewählt, ferner noch willkürlich eine 3- bzw 5-fache Aktivierung gegenüber den gesunden Kontrollen. Hierbei wurden in den Gruppen mit hohen Funktionswerten nicht signifikant mehr Ereignisse beobachtet als in den Gruppen mit niedrigen Werten. In einer daraufhin durchgeführten Time-to-event-Analyse nach Kaplan-Meyer zeigte sich allerdings für CD62 (baseline) > 5 ein früheres Eintreten kardiovaskulärer Ereignisse, im Mittel 47,6 vs. 69,9 Monate, p = 0,05. Als Risikofaktoren in dieser Studie erwiesen sich insbesondere das Alter und das Alter bei Transplantation, letzteres erwies sich in einer logistischen Regressionsanalyse als der wichtigster Faktor. Dies ist nach unserem Wissen die erste Untersuchung, die den prädiktiven Wert von Thrombozyten-gebundenem CD62 sowie von PAC-1 für kardiovaskuläre Ereignisse evaluiert. Es ergibt sich kein Hinweis, dass diese Marker einen prädiktiven Wert haben. Somit erscheint auch eine direkte pharmakologische Beeinflussung der Thrombozytenfunktion oder eine Veränderung der Immunsuppression nicht wegweisend, um die Inzidenz kardiovaskulärer Ereignisse bei nierentransplantierten Patienten zu senken.
Auswirkungen einer Mutation des Adhäsionrezeptors PSGL-1 bei humanen neutrophilen Granulozyten
(2009)
Der VNTR Polymorphismus des PSGL-1 ist schon seit längerer Zeit Gegenstand wissenschaftlicher Untersuchungen. Der Rezeptor weist je nach Genotyp eine unterschiedliche Länge auf. Dabei ist der Rezeptor mit dem Allel A der längste, das C-Allel weist phänotypisch den kürzesten Rezeptor auf. Der Rezeptor mit dem B-Allel liegt mit der Länge in der Mitte der drei Rezeptoren. In dieser Studie wurde das Roll- und das Adhäsionsverhalten von Leukozyten mit den Genotypen AA bzw. BB mit Hilfe eines Flusskammermodells untersucht. Dieses Verhalten kommt im Rahmen der Bindung zustande, welche P-Selektin und PSGL-1 miteinander eingehen. Das Blut von acht Probanden wurde untersucht, vier Probanden wiesen den Genotyp AA, die anderen vier den Genotyp BB auf. Die Leukozyten wurden aus dem Vollblut isoliert, verdünnt und in das Flusskammermodell eingespeist. Die verdünnte Zellsuspension wurde mittels einer Pumpe über ein Schlauchsystem durch eine Messkammer befördert, welche im Vorfeld mit P-Selektin beschichtet wurde. Dort konnten die Zellen mikroskopisch untersucht und videotechnisch dokumentiert werden. Anschließend konnte die Rollgeschwindigkeit der neutrophilen Granulozyten und die Anzahl der adhärenten Zellen an der Oberfläche durch Computerprogramme ermittelt werden. Als Resultat ergab sich ein signifikanter Unterschied zwischen der Rollgeschwindigkeit der Zellen des Genotyps AA und der Zellen des Genotyps BB. Dabei wiesen die Zellen mit dem B-Allel wegen der geringeren Länge des PSGL-1 eine höhere Rollgeschwindigkeit auf, als die Zellen mit dem AAllel, deren PSGL-1 länger ist. Zudem blieben signifikant weniger Leukozyten mit dem BAllel an der Oberfläche haften als die Leukozyten der anderen Gruppe. Daraus lässt sich schließen, dass die Bindungskraft zwischen PSGL-1 und PSelektin von der Länge des PSGL-1 abhängig ist. Der kürzere Rezeptor (B-Allel des PSGL-1) weist also eine geringere Bindungskraft auf als der längere Rezeptor (A-Allel des PSGL-1). Die Bindung zwischen PSGL-1 und PSelektin lässt sich wahrscheinlich pharmakologisch beeinflussen. Es wurden Antikörper entwickelt, die in klinischen Studien Erfolg versprechende Ansätze bei der Entzündungshemmung gezeigt haben. Die aktuelle Literatur zu klinisch pharmakologischen Behandlungsansätzen wurde in dieser Arbeit diskutiert.
Very little is known about the occlusal wear pattern in the Neanderthal posterior dentition. Usually dental wear is closely related to the physical properties of the ingested food, and consequently can be used to obtain information about diet. Neanderthal dietary reconstructions have been mostly based on the analysis of accompanying faunal remains and isotopic signatures of bones and tooth enamel, suggesting that they exploited larger portions of animal proteins from large and medium-sized herbivores. Probably these studies may do not reflect the bulk diet, tending to underestimate plant consumption and to overestimate meat consumption. In the present work the occlusal wear pattern of maxillary molars of Homo neanderthalensis (N=19) and early Homo sapiens (N=12)have been analyzed, applying non-destructive methods based on virtual three-dimensional polygonal models generated from surface scanning of dental casts. The sample groups occupied different geographical areas at different chronological times. The 3D digital tooth models were analyzed using the “Occlusal Fingerprint Analysis” (OFA) method (Kullmer et al. 2009), describing and quantifying the occlusal wear pattern derived from two wear facet angles (dip and dip direction), wear facet area and occlusal relief index (ORI). The OFA method provides information about the dynamics of the occlusal relationships and their function, permitting the reconstruction of the mandibular movements responsible for the contacts created during the chewing cycle. Since jaw movements and diet are closely related, the results obtained, can be used to interpret the diet of the two Pleistocene hominin species. In order to evaluate how dietary differences influence the occlusal wear pattern, upper molars of modern hunter-gatherers (N=42) with known diet and different dietary habits, have been included in the sample and compared with those of Neanderthals and early Homo sapiens. Results show that within the modern hunter-gatherers sample, the occlusal wear pattern of carnivorous populations differs from those who relied on a mixed-diet. In particular, the study of relative facet areas clearly distinguish meat-eaters from mixed-diet hunter-gatherers, while ORI results and wear facet inclinations (dip angle) seem to reflect directly the abrasiveness of the diet, including the influence of exogenous materials during food preparation. The Neanderthal occlusal wear pattern is characterized by an ecogeographic variation, suggesting the exploitation of different food resources. In particular Neanderthals who inhabited relatively warm environments of southern Europe and the Near East exhibit an occlusal wear pattern different from those of meat-eaters hunter-gatherers from tempered and cooler regions, displaying some features similar to those of Bushmen. These results suggest the exploitation of a broad variety of food sources. The analysis of the occlusal wear pattern in Neanderthals and early Homo sapiens who inhabited Europe during the cooler Oxygen Isotope Stage 3 (OIS3) shows many similarities between the two hominid species. These results indicate the exploitation of similar and low-diversified food sources, based mostly on the consumption of animal proteins, as suggested through the clear similarities with the wear patterns found in modern meat-eaters hunter-gatherers. In both studied groups, Neanderthals and early Homo sapiens the occlusal wear pattern is characterized by high ORI and dip angle values, suggesting the intake of a low-abrasive diet, probably due to the absence of sophisticated food preparation techniques introducing external silica grains, e.g. from soil (grinding of seeds) or plant cells, as those, seen in modern hunter-gatherer populations. The analysis of the occlusal fingerprints in Neanderthal and early European Homo sapiens upper molars suggests that both species followed very similar adaptive dietary strategies, based on a distinctive versatility and flexibility in the daily diet, depending on availability of resources according to environmental circumstances.
The C-module-binding factor (CbfA) is a multidomain protein that belongs to the family of jumonji-type (JmjC) transcription regulators. In the social amoeba Dictyostelium discoideum, CbfA regulates gene expression during the unicellular growth phase and multicellular development. CbfA and a related D. discoideum CbfA-like protein, CbfB, share a paralogous domain arrangement that includes the JmjC domain, presumably a chromatin-remodeling activity, and two zinc finger-like (ZF) motifs. On the other hand, the CbfA and CbfB proteins have completely different carboxy-terminal domains, suggesting that the plasticity of such domains may have contributed to the adaptation of the CbfA-like transcription factors to the rapid genome evolution in the dictyostelid clade. To support this hypothesis we performed DNA microarray and real-time RT-PCR measurements and found that CbfA regulates at least 160 genes during the vegetative growth of D. discoideum cells. Functional annotation of these genes revealed that CbfA predominantly controls the expression of gene products involved in housekeeping functions, such as carbohydrate, purine nucleoside/nucleotide, and amino acid metabolism. The CbfA protein displays two different mechanisms of gene regulation. The expression of one set of CbfA-dependent genes requires at least the JmjC/ZF domain of the CbfA protein and thus may depend on chromatin modulation. Regulation of the larger group of genes, however, does not depend on the entire CbfA protein and requires only the carboxy-terminal domain of CbfA (CbfA-CTD). An AT-hook motif located in CbfA-CTD, which is known to mediate DNA binding to A+T-rich sequences in vitro, contributed to CbfA-CTD-dependent gene regulatory functions in vivo.
Modelling protein flexibility and plasticity is computationally challenging but important for understanding the function of biological systems. Furthermore, it has great implications for the prediction of (macro) molecular complex formation. Recently, coarse-grained normal mode approaches have emerged as efficient alternatives for investigating large-scale conformational changes for which more accurate methods like MD simulation are limited due to their computational burden. We have developed a Normal Mode based Simulation (NMSim) approach for efficient conformation generation of macromolecules. Combinations of low energy normal modes are used to guide a simulation pathway, whereas an efficient constraints correction approach is applied to generate stereochemically allowed conformations. Non-covalent bonds like hydrogen bonds and hydrophobic tethers and phi-psi favourable regions are also modelled as constraints. Conformations from our approach were compared with a 10 ns MD trajectory of lysozyme. A 2-D RMSD plot shows a good overlap of conformational space, and rms fluctuations of residues show a correlation coefficient of 0.78 between the two sets of conformations. Furthermore, a comparison of NMSim simulations starting from apo structures of different proteins show that ligand-bound conformations can be sampled for those cases where conformational changes are mainly correlated, e.g., domain-like motion in adenylate kinase. Efforts are currently being made to also model localized but functionally important motions for protein binding pockets and protein-protein interfaces using relevant normal mode selection criteria and implicit rotamer basin creation.
This article shows that investors financing a portfolio of projects may use the depth of their financial pockets to overcome entrepreneurial incentive problems. Competition for scarce informed capital at the refinancing stage strengthens investors’ bargaining positions. And yet, entrepreneurs’ incentives may be improved, because projects funded by investors with ‘‘shallow pockets’’ must have not only a positive net present value at the refinancing stage, but one that is higher than that of competing portfolio projects. Our article may help understand provisions used in venture capital finance that limit a fund’s initial capital and make it difficult to add more capital once the initial venture capital fund is raised. (JEL G24, G31)
This paper shows that active investors, such as venture capitalists, can affect the speed at which new ventures grow. In the absence of product market competition, new ventures financed by active investors grow faster initially, though in the long run those financed by passive investors are able to catch up. By contrast, in a competitive product market, new ventures financed by active investors may prey on rivals that are financed by passive investors by “strategically overinvesting” early on, resulting in long-run differences in investment, profits, and firm growth. The value of active investors is greater in highly competitive industries as well as in industries with learning curves, economies of scope, and network effects, as is typical for many “new economy” industries. For such industries, our model predicts that start-ups with access to venture capital may dominate their industry peers in the long run. JEL Classifications: G24; G32 Keywords: Venture capital; dynamic investment; product market competition
In der vorliegenden Arbeit wurden zwei motivationale Erklärungsmodelle, Zielorientierungen und das kognitiv-motivationale Prozessmodell, im Rahmen des selbstregulierten Lernens integriert. Selbstregulationsprozesse sind nach Carver und Scheier (1981) zyklisch angelegt. Zu den Bestandteilen der Selbstregulation gehören nach Boekaerts (1999)Regulation der Informationsverarbeitung, Regulation des Lernprozesses und Regulation des Selbsts. Auf dieser Ebene sind die Zielorientierungen angesiedelt. In dieser Arbeit das 2 x 2 Modell von Elliot und McGregor (2001) herangezogen. Es berücksichtigt zwei Dimensionen, die Valenz (Annäherungs- und Vermeidungskomponente) und die Kompetenz (Vergleichsmaßstab intern und extern). Hieraus resultieren: 1) Lern-Annäherungs-Ziele (positive Valenz & interner Vergleich, 2) Lern-Vermeidungs-Ziele (negative Valenz & interner Vergleich), 3) Leistungs-Annäherungs-Ziele (positive Valenz & externer Vergleich) und 4) Leistungs-Vermeidungs-Ziele (negative Valenz & externer Vergleich). Diese vier Zielorientierungen sind der erste Teil des integrierten Modells, der zweite zentrale Teil ist das kognitiv-motivationale Prozessmodell (Vollmeyer & Rheinberg, 1999, 2006). Ausgangspunkt ist die aktuelle Motivation, die aus 1) der Erfolgswahrscheinlichkeit, 2) der Misserfolgsbefürchtung, 3) dem Interesse und 4) der Herausforderung als unabhängige Faktoren besteht. Diese aktuelle Motivation wirkt nicht direkt auf die Leistung, sondern durch kognitive (hier: Metakognition) und motivationale (hier: Flow-Erleben) Mediatoren. Es wurden drei Fragestellungen bearbeitet. Die erste Fragestellung betraf das Zusammenspiel der Zielorientierungen und der aktuellen Motivation. Eine Überprüfung dieses integrierten Motivationsmodell erfolgte mittels Pfadanalyse. Die zweite und dritte Fragestellung befasste sich spezifisch mit dem kognitiv-motivationalen Prozessmodell. Es wurden Subgruppen auf der Basis der aktuellen Motivation identifiziert und ihre Bedeutung für die Mediatoren und die Leistung untersucht. Die dritte Fragestellung fokussierte den Prozesscharakter des Modells. Hier erfolgten Analysen über den Arbeitsprozess hinweg. Die Fragebögen (Achievement Goal Questionnaire (Elliot & McGregor, 2001), Metakognitionsfragebogen (aufbauend auf LIST (Wild, 2000) und Metacognitive Awareness Inventory (Schraw & Dennison, 1994), Fragebogen zur aktuellen Motivation (Rheinberg, Vollmeyer & Burns, 2001), Flow-Kurz-Skala (Rheinberg, Vollmeyer & Engeser, 2003)) und die Problemlöseaufgaben (Sudokus) wurden in einer Pilotstudie getestet. An der Hauptstudie nahmen 202 Personen teil (73% weiblich). Das integrierte Motivationsmodell geht davon aus, dass eine positiver Effekt der Zielorientierungen als Personenvariable auf die aktuelle Motivation besteht. Die aktuelle Motivation als Startpunkt des situationalen Geschehens wiederum wirkt positiv auf die Mediatoren Flow-Erleben und Metakognition, hat aber keinen direkten Effekt auf die Leistung. Dieser wird nämlich über die Mediatoren vermittelt. Deswegen wird ein positiver Effekt des Flow-Erlebens und der Metakognition auf die Leistung erwartet. Das Zusammenwirken der beiden Mediatoren kann aus dem kognitiv-motivationalen Prozessmodell nicht abgeleitet werden. Ob ein Zusammenhang besteht oder nicht wird geprüft. Für das Vorwissen wird ein positiver Effekt auf die aktuelle Motivation und die Leistung erwartet. Die Pfadanalyse zur Überprüfung des integrierten Motivationsmodells zeigte, dass eine Integration nicht nur theoretisch sinnvoll ist, sondern auch empirisch gestützt wird. Die Bedeutung der Metakognition als kognitiver Mediator wurde gezeigt. Die zweite Fragestellung fokussierte auf die aktuelle Motivation. Auf der Basis dieser wurden mittels Clusteranalyse drei distinkte Gruppen identifiziert: hoch Motivierte, niedrig Motivierte und ängstlich Motivierte (vergleichbar zu Vollmeyer & Rheinberg, 2004). Diese Gruppen unterschieden sich hinsichtlich ihres Flow-Erlebens, ihrer Metakognition und ihrer Leistung. Die hoch Motivierten erlebten am meisten Flow, berichteten mehr Metakognition und zeigten bessere Leistung. Der Prozesscharakter des kognitiv-motivationalen Prozessmodells stand im Mittelpunkt der dritten Fragestellung. Diese Analyse über die drei Sudokus hinweg zeigte eine ähnliche Entwicklung des Flow-Erlebens bei den hoch und niedrig Motivierten. Vom ersten zum zweiten Sudoku stieg es an, um dann wieder abzufallen. Dies war bei der Metakognition nicht der Fall. Die hoch Motivierten berichteten einen stärkeren Rückgang der Metakognition beim dritten Sudoku als die niedrig Motivierten. Bei der Leistung zeigte sich für die hoch Motivierten ein Anstieg beim zweiten Sudoku und dann ein Rückgang beim dritten, wohingegen die Leistung der niedrig Motivierten kontinuierlich abfiel. Abschließend wurden die Schwierigkeiten und Grenzen der vorliegenden Arbeit diskutiert und Implikationen der Ergebnisse für die Theorieentwicklung und ihre Bedeutung für den Anwendungskontext aufgezeigt.
We have investigated the role of reactive oxygen species and thiol-oxidizing agents in the induction of cell death and have shown that adenocarcinoma gastric (AGS) cells respond differently to the oxidative challenge according to the signaling pathways activated. In particular, apoptosis in AGS cells is induced via the mitochondrial pathway upon treatment with thiol-oxidizing agents, such as diamide. Apoptosis is associated with persistent oxidative damage, as evidenced by the increase in carbonylated proteins and the expression/activation of DNA damage-sensitive proteins histone H2A.X and DNA-dependent protein kinase. Resistance to hydrogen peroxide is instead associated with Keap1 oxidation and rapid translocation of Nrf2 into the nucleus. Sensitivity to diamide and resistance to hydrogen peroxide are correlated with GSH redox changes, with diamide severely increasing GSSG, and hydrogen peroxide transiently inducing protein-GSH mixed disulfides. We show that p53 is activated in response to diamide treatment by the oxidative induction of the Trx1/p38(MAPK) signaling pathway. Similar results were obtained with another carcinoma cell line, CaCo2, indicating that these findings are not limited to AGS cells. Our data suggest that thiol-oxidizing agents could be exploited as inducers of apoptosis in tumor histotypes resistant to ROS-producing chemotherapeutics.
Macrophages ingesting apoptotic cells attenuate inflammatory responses, such as reactive oxygen species (ROS) generation. In atherosclerosis, ongoing inflammation and accumulation of apoptotic/necrotic material are observed, suggesting defects of phagocytes in recognizing or responding to dying cells. Modified lipoproteins such as oxidized LDL (oxLDL) are known to promote inflammation and to interfere with apoptotic cell clearance. Here, we studied the impact of cells exposed to oxLDL on their ability to interfere with the oxidative burst in phagocytes. In contrast to apoptotic cells, cells dying in response to or in the presence of oxLDL failed to suppress ROS generation despite efficiently being taken up by phagocytes. In addition, apoptotic cells, but not oxLDL-treated cells, inhibited phosphorylation of extracellular signal-regulated kinase, which is important for NADPH oxidase activation. oxLDL treatment did not interfere with activation of the antiinflammatory transcriptional regulator peroxisome proliferator-activated receptor gamma by apoptotic cells. Moreover, cells exposed to oxLDL failed to suppress lipopolysaccharide- induced proinflammatory cytokine expression, whereas apoptotic cells attenuated these phagocyte responses. Thus, the presence of oxLDL during cell death impaired the ability of apoptotic cells to act antiinflammatory with regard to oxidative burst inhibition and cytokine expression in phagocytes.