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kurz und kn@pp news : Nr. 47
(2019)
Die Dissertation „“Man at the Crossroads“ - “El Hombre Controlador del Universo“ - Diego Rivera zwischen New York und Mexiko 1933/34“, vorgelegt von Elena Stiehr im Fachbereich 9 am Kunstgeschichtlichen Institut der Johann Wolfgang Goethe-Universität, Frankfurt unter Betreuung von Prof. Dr. Hans Aurenhammer und Dr. Antje Krause-Wahl, leistet das erste Mal in der Forschung eine umfangreiche Untersuchung der Zweitversion des Freskos „Man at the Crossroads“. Diese realisierte Diego Rivera 1934 unter dem Titel „El Hombre Controlador del Universo“ etwa ein halbes Jahr nachdem „Man at the Crossroads“ im Rockefeller Center, New York aufgrund seines kommunistischen Bildinhalts zerstört wurde. Ziel der Untersuchung ist es, die verschiedenen Kriterien aufzuzeigen, unter denen Rivera die mexikanische Version verwirklichte, die noch heute im Palacio de Bellas Artes in Mexiko-Stadt zu sehen ist. So soll dargestellt werden, dass sich das Fresko trotz seines auf den ersten Blick hin ähnlichen Erscheinungsbildes prägnant von der Erstversion unterscheidet. Darauf weist auch bereits die Umbenennung des Werkes hin. Gleichzeitig jedoch ist „El Hombre Controlador del Universo“ ganz und gar amerikanisch. Durch die detaillierte Schilderung der Realisierung von „Man at the Crossroads“ von März bis Mai 1933 anhand von Primärquellen, wie das Tagebuch von Riveras Assistentin Lucienne Bloch und Berichte aus der amerikanischen Presse, der Analyse, ob und wie Rivera die Richtlinien des Kunstprogramms des Rockefeller Center befolgte und durch Vergleiche mit Werken anderer Künstler, die wie Rivera im Auftrag der Rockefellers arbeiteten, wird das New Yorker Erbe in „El Hombre Controlador del Universo“ aufgezeigt. Maßgeblich dafür ist überraschenderweise jedoch nicht die Wiederholung der amerikanischen Motive aus der Erstversion, wie der US-amerikanischen Kapitalistenklasse, der desolaten Situation der USamerikanischen Arbeiter und Bauern im Zuge der Weltwirtschaftskrise und der technischen und naturwissenschaftlichen Errungenschaften, die erstmals in der Forschung identifiziert und kontextualisiert werden, sondern vor allem die Integration neuer Motive, die fest mit den USA verbunden sind. So erlebte Rivera in New York einen intensiven Austausch mit den USamerikanischen Trotzkisten Max Shachtman und James Cannon, die der Künstler nun in der Zweitversion zusammen mit Trotzki selbst und dem Aufruf zur IV. Internationalen für die Bekämpfung des Kapitalismus, Imperialismus und Faschismus darstellt. In diesem Kontext steht im Bild weiterhin das Portrait des deutschen Widerstandskämpfers Willi Münzenberg, der erstmals in der Literatur identifiziert wird. Rivera zeigt in der Zweitversion nun aber auch in konkreter Gestalt die zu bekämpfende Gegenposition, die in Joseph Goebbels, Adolf Hitler, Josef Stalin und dem japanischen Kaiser Hirohito zu finden ist. Auch diese Portraits wurden in der Forschung bislang übersehen.
Entgegen der in der Literatur vertretenen These, dass die Zweitversion an Kraft verloren hätte, da sie sich nicht mehr im Herzen des Kapitalismus, also dem Rockefeller Center, befinde, macht die Untersuchung deutlich, dass Rivera mit dem Fresko in Mexiko dringlicher als je zuvor für eine marxistisch-trotzkistische Internationale wirbt. Diese sollte sich von Mexiko aus über den gesamten amerikanischen Kontinent erstrecken und der kapitalistisch-imperialistischen Allianz Einhalt gebieten. Die Arbeit leistet darüber hinaus einen wichtigen Beitrag für den Diskurs über die Rezeption der prähispanischen Kunst im Werk von Diego Rivera. So wird erstmals aufgezeigt, dass Rivera auch in „El Hombre Controlador del Universo“ Motive aus der altmexikanischen Kultur ableitet. Im Gegensatz zu anderen Fresken wurde das Wandbild noch nicht unter dieser Fragestellung untersucht. Grund dafür könnte sein, dass Rivera die ursprünglich mexikanischen Motive, wie die der Sonne und des Mondes, der Nutzpflanzen, der Tiere und des Totenkultes, in einen wissenschaftlichen Kontext einbettet und sie daher nicht auf dem ersten Blick als originär mexikanisch wahrgenommen werden. Der Epilog der Arbeit führt einen Vergleich mit dem für die Pariser Weltausstellung 1952 realisierten Freskos „Friedenstraum und Kriegsalbtraum. Realistische Phantasie“ fort, den 2008 erstmals in der Forschung Ana Isabel Pérez Gavilan Ávila angestoßen hat. Aufgrund der Darstellung von Stalin und Mao als Initiator einer Friedensbewegung und der USA als Atommacht und Folterer von Koreanern und Chinesen hatte dieses Fresko ähnlich wie „Man at the Crossroads“ eine scharfe Zensur erhalten. Rivera behauptete daraufhin sein Bild verteidigend, dass das Fresko eine inhaltliche und formale Fortsetzung von „El Hombre Controlador del Universo“ sei. Ein bislang nicht publizierter Brief, der sich im Archiv des CENIDIAP in Mexiko befindet, legt jedoch dar, dass Rivera mit Hilfe des Wandbildes lediglich versuchte, nach über 20 Jahren wieder von der Kommunistischen Partei aufgenommen zu werden.
Konzepte digitaler (Re-)Präsentationen von Literatur zwischen Pluralisierung und Standardisierung
(2019)
Einleitung
(2019)
Die Plasmamembran eukaryotischer Zellen dient als Barriere zwischen dem Inneren einer Zelle und ihrer Umgebung. Eine wichtige Aufgabe von Proteinen, die sich in der Plasmamembran befinden, besteht in der Erkennung der Umgebung, der Übermittlung dieser Informationen über die Plasmamembran in das Innere einer Zelle und der Einleitung einer zellulären Antwort. Membranrezeptoren binden Liganden, was zu ihrer Aktivierung und der Rekrutierung von intrazellulären Proteinen führt. Funktionelle Signalkomplexe werden gebildet und leiten einen Informationstransfer durch die Zellmembran ein, so dass die Expression bestimmter Gene stimuliert oder unterdrückt wird. Eine Störung der Signalinitiierung und -übertragung tritt bei vielen Krankheiten auf, so dass Membranproteine ein wichtiges Ziel in der Medikamentenentwicklung sind.
In dieser Arbeit wird die Fragestellung bearbeitet, wie der Tumornekrosefaktor-Rezeptor 1 (TNFR1) in funktionelle Komplexe in der Plasmamembran einer intakten Zelle organisiert ist. TNFR1 besitzt vier cysteinreiche Domänen (CRDs) in seiner extrazellulären Region. Die erste und von der Plasmamembran am weitesten entfernte CRD ist die Pre-Ligand Assembly Domain (PLAD). Kristallstrukturen zeigten, dass sich in einem TNFR1-Dimer zwei PLAD in unmittelbarer Nähe befinden. Crosslinking-Experimente berichteten über mehrere oligomere Zustände von TNFR1; die Ergebnisse unterschieden sich nach Art und Konzentration des Crosslinkers. In der nativen Umgebung einer intakten Zelle wurde der oligomere Zustand von TNFR1 bisher nicht bestimmt. Der kanonische Ligand für TNFR1 ist der Tumornekrosefaktor alpha (TNF), ein Homotrimer, welches in löslicher oder membrangebundener Form vorliegt. Nach der Bindung von TNF an TNFR1 bilden sich Rezeptortrimere. Diese Proteinkomplexe rekrutieren intrazellulär Proteine und bilden einen funktionellen Membrankomplex, der intrazelluläre Signalkaskaden aktiviert. Die kanonische Signalweiterleitung erfolgt durch den nuclear factor kappa-light-chain-enhancer of activated B-cells (NF-B), welcher Zellteilung oder Entzündung induziert. TNFR1 kann auch andere Signalwege wie beispielsweise Apoptose durch einen zytosolischen Komplex und die Procaspase-8, oder Nekroptose durch das Nekrosom und die mixed lineage kinase domain-like (MLKL)-Domäne einleiten. Die Dysregulation von TNFR1 ist bei einer Vielzahl von Krankheiten zu finden. Erhöhte TNFR1-Expressiosraten treten bei acquired immune deficiency syndrome (AIDS), multipler Sklerose und verschiedenen Krebsarten auf.
In einem zweiten Projekt wurde in Zusammenarbeit mit Prof. Dr. Michael Lanzer (Heidelberg, Germany) der Expressionsgrad des Proteins VAR2CSA in membranassoziierten knobs bestimmt, welche in Erythrozyten vorkommen, die mit dem Parasiten Plasmodium falciparum infizierten wurden. VAR2CSA gehört zur Proteinfamilie des Plasmodium falciparum erythrocyte membrane protein 1 (pfEMP1). Nach einer Infektion wird VAR2CSA zur Wirtszellmembran transportiert und in knobs eingelagert. Patienten, die Sichelzellenanämie-Erythrozyten (HbAS) aufweisen, sind im Gegensatz zu Patienten mit gesunden Erythrozyten (HbAA) immun gegen Malaria. Während die beiden Erythrozytentypen eine unterschiedliche Morphologie der knobs aufweisen, blieb ihre Zusammensetzung in Bezug auf VAR2CSA bisher ungeklärt.
Das Verständnis der Proteinfunktion erfordert eine Beschreibung der molekularen Organisation funktioneller Einheiten in der zellulären Umgebung. Hierfür ist die Fluoreszenzmikroskopie eine geeignete Methode, da sie eine gezielte Markierung von Zielproteinen ermöglicht. Die hohe Sensitivität ermöglicht die Visualisierung einzelner Proteine. Eine Einschränkung in der konventionellen Fluoreszenzmikroskopie ist die Auflösungsgrenze. Strukturelle Elemente, die kleiner als etwa die halbe Anregungswellenlänge sind (für die meisten Anwendungen 200 bis 300 nm) können nicht aufgelöst werden. Die Entwicklung der hochauflösenden Fluoreszenzmikroskopie ermöglichte es, diese Auflösungsgrenze zu umgehen und eine räumliche Auflösung von wenigen Nanometern zu erreichen, was die Visualisierung und Charakterisierung einzelner Proteinkomplexe ermöglichte. Eine Art der hochauflösenden Fluoreszenzmikroskopie ist die single-molecule localization microscopy (SMLM), die auf der Detektion einzelner Fluorophore, einer genauen Bestimmung ihrer Position (Lokalisation) und der Erzeugung eines rekonstruierten Bildes unterhalb der optischen Auflösungsgrenze basiert. Da die meisten Proben in der Fluoreszenzmikroskopie eine zu hohe räumliche Dichte an Fluorophoren aufweisen, um den Nachweis von einzelnen Fluorophoren zu ermöglichen, werden Verfahren zur Kontrolle der Emission von Fluorophoren eingesetzt. Eine Möglichkeit ist der Einsatz von Fluorophoren, die optisch zwischen einem nicht-fluoreszierenden und einem fluoreszierenden Zustand geschaltet werden können, z.B. photoschaltbare fluoreszierende Proteine in photoactivated localization microscopy (PALM) oder organische Farbstoffe in (direct) stochastic optical reconstruction microscopy ((d)STORM). SMLM erreicht eine räumliche Auflösung von 20 nm, was in den meisten Fällen ausreicht, um einzelne Proteinkomplexe in einer Zelle aufzulösen. Diese räumliche Auflösung ist jedoch nicht ausreichend, um Untereinheiten innerhalb eines Proteinkomplexes zu visualisieren. Zu diesem Zweck wurde SMLM erweitert und die verfügbare kinetische Information genutzt, die bei der Detektion einzelner Fluorophore ausgelesen wird. Viele Fluorophore weisen metastabile Dunkelzustände auf, die eine Lebensdauer von bis zu Sekunden aufweisen. Diese Übergänge erscheinen als "Blinken" der Fluoreszenzemission. In Kombination mit kinetischen Modellen kann aus der Anzahl an Blink-Ereignissen die Anzahl der Fluorophore ermittelt werden. Angewendet auf hochaufgelöste Proteinkomplexe kann die Auflösungsgrenze von hochauflösender Mikroskopie umgangen werden, und die Anzahl der Protein-Untereinheiten in einem hochaufgelösten Proteincluster ermittelt werden. Hierzu wird beispielsweise das photoschaltbare fluoreszierende Protein mEos2 an ein Zielprotein funsioniert (quantitative PALM (qPALM)).
...
Investigating the influence of truffle´s microbiome and genotype on the aroma of truffle fungi
(2019)
Truffles (Tuber spp.) are belowground forming fungi that develop in association with roots of various host trees and shrubs. Their fruiting bodies are renowned for their enticing aromas which vary considerably, even within truffles of the same species. This aroma variability might be attributed to factors such as geographical origin, degree of fruiting body maturation, truffle genotype and microbiome (microbial communities that colonise truffle fruiting bodies) which often co-vary. Although the influence of specific factors is highlighted by several studies, discerning the contribution of each factor remains a challenge since it requires an appropriate experimental design. The primary purpose of this thesis was to gain insight into the influence of truffle’s genotype and microbiome on truffle aroma.
This doctoral thesis is comprised of four chapters. Chapter1 (Vahdatzadeh et al., 2018) aimed to exclusively elucidate the influence of truffle genotype on truffle aroma by investigating the aroma of nine mycelial strains of the white truffle Tuber borchii. We also assessed whether strain selection could be employed to improve the human- perceived truffle aroma. Quantitative differences in aroma profiles among strains could be observed upon feeding of amino acids. Considerable aroma variabilities among strains were attributed to important truffle volatiles, many of which might be derived from amino acid catabolism through the Ehrlich pathway. 13 C-labelling experiments confirmed the existence of the Ehrlich pathway in truffles for leucine, isoleucine, methionine, and phenylalanine. Sensory analyses further demonstrated that the human nose can differentiate among strains. Our results illustrated the influence of truffle genotype on truffle aroma and showed how strain selection could be used to improve the human-perceived truffle aroma.
In chapter 2 the existing knowledge on the composition of bacterial community of four truffle species was compiled using meta-analysis approach (Vahdatzadeh et al., 2015). We highlighted the endemic microbiome of truffle as well as similarities and differences in the composition of microbial community within species at various phases of their life cycle. Furthermore, the potential contribution of truffle microbiome in the formation of truffle odorants was studied. Our findings showed that truffle fruiting bodies harbour complex microbial community composed of bacteria, yeasts, filamentous fungi, and viruses with bacteria being the dominant group. Regardless of truffle species, the composition of endemic microbiome of fruiting bodies appeared very similar and was dominated by α-Proteobacteria class. However, striking differences were observed in the bacterial community composition at various stages of the life cycle of truffle.Our analyses further suggested that odorants common to many truffle species might be produced by both truffle fungi and microbes, whereas specific truffle odorants might be derived from microbes only. Nevertheless, disentangling the origin of truffle odorants is very challenging, since acquiring microbe-free fruiting bodies are currently not possible.
Chapter 3 (Splivallo et al., 2019) further characterises truffle-associated bacterial communities of fruiting bodies of the black truffle T. aestivum from two different orchards. It aimed at defining the native microbiome in this truffle species, evaluating the variability of their microbiome across orchards, and assessing factors that shape assemblages of the bacterial communities. The dominant bacterial communities in T. aestivum revealed to be similar in both orchards: although a large portion of fruiting bodies were dominated by the α-Proteobacteria class (Bradyrhizobium genus) similar to other so far-assessed truffle species, in few cases β-Proteobacteria (Polaromonas genus), or Sphingobacteria (Pedobacter genus) were found to be predominant classes. Moreover, factors shaping bacterial communities influenced the two orchards differently, with spatial location within the orchard being the main driver in Swiss orchard and collection season in the French one. Surprisingly, in contrast to other fungi, truffle genotype and the degree of fruiting body maturity seemed not to contribute in shaping the assembly of truffle microbiome. Altogether, our data highlighted the existence of heterogeneous bacterial communities in T. aestivum fruiting bodies which are dominated by either of the three bacterial classes and mainly by the α-Proteobacteria class, irrespective of geographical origin. They further illustrated that determinants driving the assembly of various bacterial communities within truffle fruiting bodies are site-specific. Truffles are highly perishable delicacies with a short shelf life (1-2 weeks), and their aroma changes profoundly upon storage. Since truffle aroma might be at least partially produced by the truffle microbiome, chapter 4 (Vahdatzadeh et al., 2019) focuses on assessing the influence of the truffle microbiome on aroma deterioration of T.aestivum during post harvest storage. Specifically, volatile profile and bacterial communities of fruiting bodies collected from four different regions (three in France and one in Switzerland) were studied over nine days of storage. Our findings demonstrated the gradual replacement of dominant bacterial classes in fresh truffles (α-Proteobacteria, β-Proteobacteria, and Sphingobacteria) by food spoilage bacteria (members of γ- Proteobacteria and Bacilli classes), regardless of the initial diversity of the bacterial classes. This shift in the bacterial community also correlated with changes in volatile profiles, and markers for truffle freshness and spoilage could be identified. Ultimately, network analysis illustrated possible links among those volatile markers and specific bacterial classes. Our data showed that storage deeply influenced the composition of bacterial community as well as aroma of truffle fruiting bodies. They also illustrated the correlation between the shift in truffle microbiome, from commensal to detrimental, and the change of aroma profile, possibly leading to the loss of fresh truffle aroma. Overall, the work undertaken in this thesis demonstrated that truffle genotype and microbiome had a stronger influence on truffle aroma than previously believed.
Generierung CMV-spezifischer T-Zellen aus mononukleären Zellen von CMV-seronegativen Spendern
(2019)
Die positive Entwicklung der adoptiven Zelltherapie zu einer effektiven und sicheren Therapieform ist enorm wichtig für die Behandlung von Patienten mit einer opportunistischen Infektion, wie bspw. mit CMV oder EBV, nach einer Stammzelltransplantation.
Bei (CMV-)seropositiven Spendern besteht die Möglichkeit der Selektion von VST und somit eine Therapieoption für den CMV-Infizierten Empfänger. Aufgrund der nicht vorhandenen VST bei einem negativen Spender, besteht die Option einer Infusion von selektierten VSTs bei einem CMV-infizierten Empfänger nicht. Dies ist ein besonderes Problem bei seropositiven Patienten, die die Stammzellen eines seronegativen Spenders erhalten haben und bei denen die Gefahr einer Reaktivierung des Virus besonders hoch ist.
Um einen möglichen Lösungsansatz hierfür zu finden, wurde in dieser Arbeit versucht Zellen zu generieren, die eine adoptive Zelltherapie bei dem oben genannten Spender/Empfänger-Konstellation ermöglichen.
Der Forschungsansatz dahinter war, aus naiven T-Zellen des seronegativen Spenders, durch Priming mit einem CMV-spezifischen Antigens, in diesem Fall CMV-pp65, VST zu generieren. Um diese herstellen zu können wurden mehrere Versuchsabläufe getestet. Zunächst inkubierte man unmanipulierte PBMCs mit CMV-pp65-geprimten Monozyten in verschiedenen Koinkubation-Ratios. Dies führte nicht zum gewünschten Erfolg.
In dieser Arbeit erfolgte die Selektion der Monozyten via Adhärenzmethode und mittels Microbeads. Da die Monozytenreinheit nachweislich Microbeads-Methode signifikant höher war, als die Reinheit mittels der Adhärenzmethode verließ man diese und arbeitete nur noch mit Microbeads, um ein besseres Verhältnis der Koinkubation zu erzielen.
Um einen möglichen Erfolg zu erzielen wurden in einem nächsten Schritt die selektierten Monozyten zu dendritischen Zellen (DC) weiterentwickelt und wiederum mit unmanipulierten PBMCs inkubiert.
Leider konnten auch mit dieser Herangehensweise keine VST in der Zellkultur nachgewiesen werden. Weiterführend orientierte man sich in dieser Arbeit an einem Protokoll von Wölfl et al46. Hierbei wurden statt unmanipulierten PBMCs, nur CD45RA+ naive T-Zellen aus den PBMCs verwendet, die mit CMV-pp65-geprimten DCs geprimt wurden.
Orientierend an dem Protokoll von Wölfl et al. entwickelten wir einen Versuchsaufbau bestehend aus DC-Generierung, CD45RA+-Zellselektion und Koinkubation der Zellen. Dieses 13-tägige Protokoll wurde bei 5 seronegativen Spendern durchgeführt und zeigte in der FACS Analyse CMV-spezifische T-Zellen.
Der prozentuelle Anteil der VST betrug zwischen 0,33-5,70%.
Somit konnte gezeigt werden, dass es möglich ist VST aus seronegativem Spenderzellen zu generieren und ermöglicht somit Patienten mit seronegativen Stammzellspendern, die an einer CMV-Reaktivierung/Infektion leiden, die Option der adoptiven Zelltherapie, trotz Nichtvorhandenseins von VST im Spenderblut.
Schätzungen der WHO zufolge waren 2015 weltweit rund 71 Millionen Menschen von einer chronischen Hepatitis C-Infektion betroffen. Die chronische Hepatitis C ist mit einem erhöhten Risiko für die Entstehung einer Leberzirrhose und eines hepatozellulären Karzinoms assoziiert. Die NS3/4A-Protease als zentraler Bestandteil der Replikationsmaschinerie des Virus spaltet das HCV-Polyprotein und ist in die Inaktivierung antiviraler Proteine involviert. Durch ihren maßgeblichen Einfluss auf die virale Fitness stellt sie einen entscheidenden Faktor für die chronische Persistenz des Virus im Wirtsorganismus dar. Die Protease ist auch eine wichtige Zielstruktur für spezifische antivirale Medikamente in der Behandlung der chronischen Hepatitis C. Der natürlich vorkommende Polymorphismus Q80K in der NS3/4A-Protease ist bei bis zu 47 % der Patienten schon vor Therapiebeginn feststellbar, insbesondere beim Genotyp 1a. Q80K führt zum Therapieversagen bei makrozyklischen Proteaseinhibitoren, insbesondere Simeprevir. Phylogenetische Analysen konnten zeigen, dass 96 % aller HCV-Gensequenzen mit Q80K von einem gemeinsamen, genetischen Vorfahren abstammen und sich die Mutation seit Mitte des 20. Jahrhunderts scheinbar stabil ausgehend vom nordamerikanischen Kontinent etabliert hat. Daneben wurden mit A91S/T und S174N sogenannte second site-Austausche identifiziert, die assoziiert mit Q80K vorkommen. Ziel dieser Arbeit war es herauszufinden, welchen Einfluss diese second site-Austausche auf die Enzymaktivität und Proteinfaltung der Protease haben und ob sie mögliche Veränderungen durch den Q80K-Polymorphismus kompensieren. Nach Expression und Aufreinigung der NS3/4A-Protease wurden die Effekte von Q80K, A91S/T und S174N auf die Enzymaktivität und Thermostabilität mittels fluoreszenzbasierter Verfahren untersucht und im Zusammenhang mit einer in silico-3D-Strukturanalyse der Protease interpretiert. Es zeigte sich, dass A91S/T und S174N jeweils zu einer Angleichung der Thermostabilität des Proteins an den Wildtyp führen und somit Defizite in der Faltung der Protease durch Q80K kompensiert werden. Aufgrund der experimentellen Daten und der Topografie dieser Austausche innerhalb der NS3-Protease-Helikase-Struktur ist von indirekten Effekten der second site-Austausche auf die replikative Fitness der Virusvarianten auszugehen. Die hier charakterisierten Austausche in der NS3/4A-Protease tragen durch eine Stabilisierung der Proteinfaltung kritisch zur Stabilität des Q80K-Polymorphismus im Proteasegen des HCV Genotyp 1a bei.
Recently, carbonates have attracted a lot of attention, due to the recognition of their importance in the global carbon cycle. This was enabled by improvement of the experimental techniques that allow for investigating the stability, structure, and physical properties of materials and high-pressures and high-temperatures, that is, they allow for investigating minerals and geochemical processes at the conditions occurring deep inside Earth. Although a lot of research has been focused on carbonates, there are still some open questions regarding their structure and physical properties at such extreme conditions. The aim of this thesis is to establish a deeper understanding of the nature of the phase transitions in carbonates by studying how do the atoms building up the crystal structure vibrate, that is lattice dynamics. The methodology adapted in this study is a combination of experimental and computational methods which allows for a very thorough examination of the problem. The computational approach allows to determine parameters that are elusive or tedious to measure, and the experimental results provide a solid benchmark for the calculations. This tandem of methods has been widely used for investigating lattice dynamics of various materials. In this study it was used to elucidate the structure and properties of carbonates in the deep Earth conditions
In today’s "new world of work," knowledge workers are often given considerable flexibility regarding where and when to work (i.e., time-spatial flexibility) and this has become a popular approach to redesigning work. Whilst the adoption of such practices is mainly considered a top-down approach to work design, we argue that successful utilization of time-spatial flexibility requires proactivity on the part of the employee in the form of time-spatial job crafting. Previous research has demonstrated that time-spatial flexibility can have both positive and negative effects on well-being, performance, and work-life balance; yet remains mute about the underlying reasons for this and how employees can handle the given flexibility. Drawing on research from work design, we posit that in order for employees to stay well and productive in this context, they need to engage in time-spatial job crafting (i.e., a context-specific form of job crafting that entails reflection on time and place), which can be considered a future work skill. We propose a theoretical model of time-spatial job crafting in which we discuss its components, shed light on its antecedents, and explain how time-spatial job crafting is related to positive work outcomes through a time/spatial-demands fit.
Following a brief review of current efforts to identify the neuronal correlates of conscious processing (NCCP) an attempt is made to bridge the gap between the material neuronal processes and the immaterial dimensions of subjective experience. It is argued that this "hard problem" of consciousness research cannot be solved by only considering the neuronal underpinnings of cognition. The proposal is that the hard problem can be treated within a naturalistic framework if one considers not only the biological but also the socio-cultural dimensions of evolution. The argument is based on the following premises: perceptions are the result of a constructivist process that depends on priors. This applies both for perceptions of the outer world and the perception of oneself. Social interactions between agents endowed with the cognitive abilities of humans generated immaterial realities, addressed as social or cultural realities. This novel class of realities assumed the role of priors for the perception of oneself and the embedding world. A natural consequence of these extended perceptions is a dualist classification of observables into material and immaterial phenomena nurturing the concept of ontological substance dualism. It is argued that perceptions shaped by socio-cultural priors lead to the construction of a self-model that has both a material and an immaterial dimension. As priors are implicit and not amenable to conscious recollection the perceived immaterial dimension is experienced as veridical and not derivable from material processes—which is the hallmark of the hard problem. These considerations let the hard problem appear as the result of cognitive constructs that are amenable to naturalistic explanations in an evolutionary framework.
Introduction: Vaginal delivery out of a breech presentation in pregnancies at term are being re-implemented into clinical practice. Still, recommendations regarding exclusion criteria leading to caesarean sections are based on expert opinions, not on evidence-based guidelines. The difference in perinatal outcome and course of delivery in births with babies in frank breech position and babies in incomplete or complete breech presentation never has been investigated in a large patient cohort.
Objective: To compare perinatal outcome of vaginally intended breech deliveries between births out of frank breech position and incomplete/complete breech presentation.
Design: Prospective cohort study.
Sample: 884 women at term with a singleton in frank breech presentation (FB) and 284 women with incomplete or complete breech presentation (CB) intending vaginal birth between January 2004 and December 2018.
Methods: Maternal and fetal outcome was compared between groups using Pearson’s Chi Square test. Birth duration parameters were analysed using logistic regression.
Results: There were no differences in cesarean section rates (FB: 25.1%, CB 22.2%, p = 0.317). Short-term fetal morbidity did not differ between groups (FB: 2.5%, CB: 2.8%, p = 0.761). In vaginal deliveries the necessity to perform manual assistance was significantly more frequent in deliveries of infants in CB (FB: 39.9%, CB: 51.6%, p = 0.0013). Cord loops (FB: 10.1%, CB: 18.0%, p = 0.0004) and cesarean sections necessary because of cord prolapses (FB: 1.4%, CB 8.1%, p = 0.005) were significantly more often in deliveries with babies in CB.
Conclusion: This study provides evidence, that perinatal morbidity is not associated with the fetal leg posture in vaginally intended breech deliveries. The higher risk for the need of manual assistance during vaginal birth in deliveries of babies out of complete or incomplete breech presentation suggests that obstetrical departments re-implementing the vaginal breech in their repertoire might start with births of babies out of frank breech presentation.
Attention-deficit/hyperactivity disorder (ADHD) is a common and highly heritable neurodevelopmental disorder. In recent years, genetic studies have revealed several risk gene variants associated with ADHD; however, these variants could only be partly replicated and are responsible for only a fraction of the whole heritability of ADHD estimated from family and twin studies. One factor that could potentially explain the ‘missing heritability’ of ADHD is that childhood and adult or persistent ADHD could be genetically distinct subtypes, which therefore need to be analyzed separately. Another approach to identify this missing heritability could be combining the investigation of both common and rare gene risk variants as well as polygenic risk scores. Finally, environmental factors are also thought to play an important role in the etiology of ADHD, acting either independently of the genetic background or more likely in gene–environment interactions. Environmental factors might additionally convey their influence by epigenetic mechanisms, which are relatively underexplored in ADHD. The aforementioned mechanisms might also influence the response of patients with ADHD to stimulant and other ADHD medication. We conducted a selective review with a focus on risk genes of childhood and adult ADHD, gene–environment interactions, and pharmacogenetics studies on medication response in childhood and adult ADHD.
Uni-Highlights November 2019 : Einladungen zu ausgewählten Veranstaltungen der Goethe-Universität
(2019)
Uni-Highlights Dezember 2019 : Einladungen zu ausgewählten Veranstaltungen der Goethe-Universität
(2019)
Introduction: The neurobiological mechanisms behind panic disorder with agoraphobia (PD/AG) are not completely explored. The functional A/T single nucleotide polymorphism (SNP) rs324981 in the neuropeptide S receptor gene (NPSR1) has repeatedly been associated with panic disorder and might partly drive function respectively dysfunction of the neural “fear network”. We aimed to investigate whether the NPSR1 T risk allele was associated with malfunctioning in a fronto-limbic network during the anticipation and perception of agoraphobia-specific stimuli.
Method: 121 patients with PD/AG and 77 healthy controls (HC) underwent functional magnetic resonance imaging (fMRI) using the disorder specific “Westphal-Paradigm”. It consists of neutral and agoraphobia-specific pictures, half of the pictures were cued to induce anticipatory anxiety.
Results: Risk allele carriers showed significantly higher amygdala activation during the perception of agoraphobia-specific stimuli than A/A homozygotes. A linear group x genotype interaction during the perception of agoraphobia-specific stimuli showed a strong trend towards significance. Patients with the one or two T alleles displayed the highest and HC with the A/A genotype the lowest activation in the inferior orbitofrontal cortex (iOFC).
Discussion: The study demonstrates an association of the NPSR1rs324981 genotype and the perception of agoraphobia-specific stimuli. These results support the assumption of a fronto-limbic dysfunction as an intermediate phenotype of PD/AG.
This position paper describes clinically important, practical aspects of cervical pessary treatment. Transvaginal ultrasound is standard for the assessment of cervical length and selection of patients who may benefit from pessary treatment. Similar to other treatment modalities, the clinical use and placement of pessaries requires regular training. This training is essential for proper pessary placement in patients in emergency situations to prevent preterm delivery and optimize neonatal outcomes. Consequently, pessaries should only be applied by healthcare professionals who are not only familiar with the clinical implications of preterm birth as a syndrome but are also trained in the practical application of the devices. The following statements on the clinical use of pessary application and its removal serve as an addendum to the recently published German S2-consensus guideline on the prevention and treatment of preterm birth.
Previous studies in patients with single-sided deafness (SSD) have reported results of pitch comparisons between electric stimulation of their cochlear implant (CI) and acoustic stimulation presented to their near-normal hearing contralateral ear. These comparisons typically used sinusoids, although the percept elicited by electric stimulation may be closer to a wideband stimulus. Furthermore, it has been shown that pitch comparisons between sounds with different timbres is a difficult task and subjected to various types of range biases. The present study aims to introduce a method to minimize non-sensory biases, and to investigate the effect of different acoustic stimulus types on the frequency and variability of the electric-acoustic pitch matches. Pitch matches were collected from 13 CI users with SSD using the binary search procedure. Electric stimulation was presented at either an apical or a middle electrode position, at a rate of 800 pps. Acoustic stimulus types were sinusoids (SINE), 1/3-octave wide narrow bands of Gaussian noises (NBN), or 1/3-octave wide pulse spreading harmonic complexes (PSHC). On the one hand, NBN and PSHC are presumed to better mimic the spread of excitation produced by a single-electrode stimulation than SINE. On the other hand, SINE and PSHC contain less inherent fluctuations than NBN and may therefore provide a temporal pattern closer to that produced by a constant-amplitude electric pulse train. Analysis of mean pitch match variance showed no differences between stimulus types. However, mean pitch matches showed effects of electrode position and stimulus type, with the middle electrode always matched to a higher frequency than the apical one (p < 0.001), and significantly higher across-subject pitch matches for PSHC compared with SINE (p = 0.017). Mean pitch matches for all stimulus types were better predicted by place-dependent characteristic frequencies (CFs) based on an organ of Corti map compared with a spiral ganglion map. CF predictions were closest to pitch matches with SINE for the apical electrode position, and conversely with NBN or PSHC for the middle electrode position. These results provide evidence that the choice of acoustic stimulus type can have a significant effect on electric-acoustic pitch matching.
OXA-48 is the most common carbapenemase in Enterobacterales in Germany and one of the most frequent carbapenemases worldwide. Several reports have associated blaOXA–48 with a virulent host phenotype. To challenge this hypothesis, 35 OXA-48-producing clinical isolates of Escherichia coli (n = 15) and Klebsiella pneumoniae (n = 20) were studied in vitro, in vivo employing the Galleria mellonella infection model and by whole-genome sequencing. Clinical isolates belonged to 7 different sequence types (STs) in E. coli and 12 different STs in K. pneumoniae. In 26/35 isolates blaOXA–48 was located on a 63 kb IncL plasmid. Horizontal gene transfer (HGT) to E. coli J53 was high in isolates with the 63 kb IncL plasmid (transconjugation frequency: ∼103/donor) but low in isolates with non-IncL plasmids (<10–6/donor). Several clinical isolates were both highly cytotoxic against human cells and virulent in vivo. However, 63 kb IncL transconjugants generated from these highly virulent isolates were not more cytotoxic or virulent when compared to the recipient strain. Additionally, no genes associated with virulence were detected by in silico analysis of OXA-48 plasmids. The 63 kb plasmid was highly stable and did not impair growth or fitness in E. coli J53. In conclusion, OXA-48 clinical isolates in Germany are diverse but typically harbor the same 63 kb IncL plasmid which has been reported worldwide. We demonstrate that this 63 kb IncL plasmid has a low fitness burden, high plasmid stability and can be transferred by highly efficient HGT which is likely the cause of the rapid dissemination of OXA-48 rather than the expansion of a single clone or gain of virulence.
Das Bildnis des sogenannten "Lübecker Wunderkinds" stellt eine Kuriosität in der Porträtsammlung Holzhausen dar. Anhand zweier Porträts wird die märchenhaft anmutende, doch in Wahrheit zutiefst traurige Lebensgeschichte des Christian Heinrich Heinecken erzählt, dem seine zu jener Zeit einzigartigen Talente zum Verhängnis werden sollten.
Differences in euro-area household finances and their relevance for monetary-policy transmission
(2019)
This paper quantifies the extent of heterogeneity in consumption responses to changes in real interest rates and house prices in the four largest economies in the euro area: France, Germany, Italy, and Spain. We first calibrate a life-cycle incomplete-markets model with a financial asset and housing to match the large heterogeneity of households asset portfolios, observed in the Household Finance and Consumption Survey (HFCS) for these countries. We then show that the heterogeneity in household finances implies that responses of consumption to changes in the real interest rate and in house prices differ substantially across countries, and within countries by household characteristics such as age, housing tenure, and asset positions. The different consumption responses quantified in this paper point towards important heterogeneity in monetary-policy transmission in the euro area.
Electron microscopy (EM) demarcates itself from other structural biology techniques by its applicability to a large range of biological objects that spans from whole cells to individual macromolecules. In single-particle cryo-EM, frozen-hydrated samples, prepared by vitrification with liquid ethane, retain macromolecules in a medium that approximates their natural aqueous environment and that, in this way, preserves high-resolution structural information. Nonetheless, the sensitivity of biological specimens to the high-energy electron beam introduces restrictions on the total dose that can be used during imaging while avoiding significant radiation damage. Consequently, the signal-to-noise ratio attained in each individual image is very low, and structures with high-resolution detail must be recovered by averaging thousands of projections in random orientations. This is achieved through the use of image processing algorithms capable of aligning and classifying particle images through the evaluation of cross-correlation functions between each particle and a reference.
In recent years, several innovations took place in the field of single-particle cryo-EM, among which the development of direct electron detectors must be highlighted. Direct electron detectors have a better detective quantum efficiency (DQE) than both photographic film and CCD cameras, and offer a fast readout, compatible with the acquisition of movie stacks. Additionally, new image processing software has become available, with more sophisticated algorithms and designed to take advantage of the specific characteristics of the movies produced with direct electron detectors. These technological advances in both hardware and software catalyzed a revolution in single-particle cryo-EM, which is now routinely used for the determination of near-atomic structures. As a result, the range of macromolecules accessible to cryo-EM has increased drastically, as targets that were unsuitable before for imaging due to their small dimensions can now be adequately visualized and refined to high-resolution.
During my doctoral work, I have used single-particle cryo-EM to structurally characterize challenging membrane proteins, with a strong emphasis on protein complexes from aerobic respiratory chains. In chapter I of this thesis, I present my results on the bovine respirasome, a mitochondrial supercomplex composed of complexes I, III and IV. Chapter II is dedicated to the analysis of the structure of alternative complex III (ACIII) from Rhodothermus marinus, a bacterial quinol:cytochrome c/HiPIP oxidoreductase unrelated to the canonical cytochrome bc1 complex (complex III). In addition, in chapter III I describe the structure of KimA, a high-affinity potassium transporter that drives the transport of its substrate by using the energy stored in the form of a proton gradient. These three membrane proteins, with molecular weights ranging from 140 kDa to 1.7 MDa, illustrate the possibilities and limitations faced in single-particle cryo-EM.
The aerobic respiratory chain is responsible for the generation of a transmembrane difference of electrochemical potential that is then used by ATP synthase for the production of ATP or for driving solute transport over the membrane. They catalyze the transfer of electrons from a substrate, such as NADH or succinate, to molecular oxygen and use the chemical energy released in these redox reactions to drive the translocation of protons, or in some cases sodium ions, to the intermembrane space in mitochondria or the periplasm in bacteria.
In mitochondria, the respiratory chain is composed of four complexes: complex I (NADH:ubiquinone oxidoreductase), complex II (succinate dehydrogenase), complex III (cytochrome bc1 complex) and complex IV (cytochrome c oxidase). While it was for a long time believed that these complexes existed as single entities in the membrane, the use of milder procedures for protein purification and analysis revealed that respiratory complexes associate into well-ordered structures, known as supercomplexes. These have been proposed to offer different structural and functional advantages that are still controversial, including substrate channeling, stabilization of individual complexes and reduction of reactive oxygen species (ROS) production. The most thoroughly studied respiratory supercomplex has been the respirasome, conserved in higher eukaryotes and composed of one copy of complex I, a complex III dimer and one complex IV. By single-particle cryo-EM analysis, I retrieved a 9 Å map of the respirasome from Bos taurus, which allowed the accurate docking of atomic models of the three component complexes. The structure shows that complex III associates to the concave side of the membrane arm of complex I, while complex IV is located between the end of the complex I hydrophobic arm and complex III. Several defined protein-protein contacts are observed between the component complexes, which are mediated predominantly by supernumerary subunits and close to the membrane surfaces. The interactions established between complex I and complex III are extensive and may support the argument that the association of complex I into supercomplexes is required for the stabilization or even the biogenesis of this complex.
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Polyketide synthases (PKSs) are large megaenzymes that occur in bacteria, fungi, and plants and produce polyketides, a class of secondary metabolites. Many polyketide natural products exhibit high biological activities e.g. as antibiotics or anti-fungal compounds. The modular architecture of assembly line PKSs makes them exciting targets for engineering approaches via the exchange of whole modules or single domains. Although many engineering attempts have been pursued over the last three decades, the resulting chimeric PKSs often exhibit decreased turnover rates or diminished product yields.
In this thesis, new approaches to engineer chimeric PKSs were explored, each targeting a different aspect of the chimeric system: First the relative contribution of protein-protein and protein-substrate recognition on the turnover of chimeric PKS was assessed, revealing the importance of protein-protein interactions between the acyl carrier protein (ACP) and the ketosynthase (KS) domain in the chain translocation step. Directed evolution experiments followed to optimize the protein-protein interaction across a chimeric interface. Additionally, different junction sites for the generation of chimeric PKSs were compared, showing the ability for recombination without interfering with the chain translocation reaction, and highlighting the use of SYNZIP domains to bridge PKS modules. To optimize chimeric PKSs even further, multipoint mutagenesis of KS domains was established, with positive effects on the activity of chimeric systems.
To support engineering attempts, several structure elucidation techniques were combined with in silico modeling to characterize the architecture of a PKS module and the domain-domain interactions within it. Preliminary results show a strong conformational flexibility of the PKS module and the great potential of these techniques to define the multitude of transient interactions in PKS modules.
Endocrine disrupting compounds (EDCs) emerged as a major concern for water quality in the last decade and have been studied extensively since. Besides typical natural and synthetic estrogens also petroleum product compounds such as some PAHs have been identified as potential EDCs, revealing endocrine disruption to be a relevant mode of action for crude oil toxicity. Hence, in the context of a comprehensive retro- or prospective risk assessment of oil spills the implementation of mechanism-specific toxicity such as endocrine disruption is of high importance. To evaluate the exposure risk for the aquatic biota, research focuses on water-soluble fractions underlying an oil slick that could be simulated via water-accommodated fractions (WAF). Against this background human (ERα-CALUX®) and yeast based (A-YES®) reporter gene bioassays were successfully optimized for the application in estrogenicity evaluation of the water-accommodated fraction (WAF) from a crude oil. Combining different approaches, the estrogenicity of the WAFs from a naphthenic North Sea crude oil was tested with and without the addition of a chemical dispersant addressing specific aspects of estrogenicity including the influence of biotransformation capacities and different salinity conditions. Both the WAF free from droplets (LEWAF) as well as the chemically dispersed WAF (CEWAF) gave indications of an ER-mediated estrogenicity with much stronger ERα agonists in the CEWAF treatment. Resulting estradiol equivalents of the WAFs were above the established effect-based trigger values for both bioassays. Results indicate that the dispersant rather increased the fraction of ER-activating crude oil compounds instead of interacting with the receptor itself. Only slight changes in estrogenic responses were observed when cells capable of active metabolism (T47D) were used instead of cells without endogenous metabolism (U2-OS) in the recombinant ER transactivation CALUX assay. With the yeast cells a higher estrogenic activity was observed in the experiments under elevated salinity conditions (6‰), which was in contrast to previous expectations due to typical decrease in dissolved PAH fraction with increasing salinity (salting-out effect) but might be related to increased cell sensitivity.
Targeting self-renewal and tumorigenicity has been proposed as a potential strategy against cancer stem cells (CSCs). Epigenetic proteins are key modulators of gene expression and cancer development contributing to regulation and maintenance of self-renewal and tumorigenicity. Here, we have screened a small-molecule epigenetic inhibitor library using 3D in vitro models in order to determine potential epigenetic targets associated with self-renewal and tumorigenicity in Canine Mammary Cancer (CMC) cells. We identified inhibition of BET proteins as a promising strategy to inhibit CMC colonies and tumorspheres formation. Low doses of (+)-JQ1 were able to downregulate important genes associated to self-renewal pathways such as WNT, NOTCH, Hedgehog, PI3K/AKT/mTOR, EGF receptor and FGF receptor in CMC tumorspheres. In addition, we observed downregulation of ZEB2, a transcription factor important for the maintenance of self-renewal in canine mammary cancer cells. Furthermore, low doses of (+)-JQ1 were not cytotoxic in CMC cells cultured in 2D in vitro models but induced G2/M cell cycle arrest accompanied by upregulation of G2/M checkpoint-associated genes including BTG2 and CCNG2. Our work indicates the BET inhibition as a new strategy for canine mammary cancers by modulating the self-renewal phenotype in tumorigenic cells such as CSCs.
Cystathionine γ lyase (CSE) is the major source of hydrogen sulfide-derived species (H2Sn) in endothelial cells and plays an important role in protecting against atherosclerosis. Here we investigated the molecular mechanisms underlying the regulation of CSE expression in endothelial cells by fluid shear stress/flow. Fluid shear stress decreased CSE expression in human and murine endothelial cells and was negatively correlated with the transcription factor Krüppel-like factor (KLF) 2. CSE was identified as a direct target of the KLF2-regulated microRNA, miR-27b and high expression of CSE in native human plaque-derived endothelial cells, was also inversely correlated with KLF2 and miR-27b levels. One consequence of decreased CSE expression was the loss of Prx6 sulfhydration (on Cys47), which resulted in Prx6 hyperoxidation, decamerization and inhibition, as well as a concomitant increase in endothelial cell reactive oxygen species and lipid membrane peroxidation. H2Sn supplementation in vitro was able to reverse the redox state of Prx6. Statin therapy, which is known to activate KLF2, also decreased CSE expression but increased CSE activity by preventing its phosphorylation on Ser377. As a result, the sulfhydration of Prx6 was partially restored in samples from plaque containing arteries from statin-treated donors. Taken together, the regulation of CSE expression by shear stress/disturbed flow is dependent on KLF2 and miR-27b. Moreover, in murine and human arteries CSE acts to maintain endothelial redox balance at least partly by targeting Prx6 to prevent its decamerization and inhibition of its peroxidase activity.
Background and Aims: Fecal biomarkers are important non-invasive markers monitoring disease activity in inflammatory bowel disease (IBD). We compared the significance of fecal eosinophil cationic protein (fECP) and fecal calprotectin (fCal).
Methods: fECP and fCal were measured in patients with Crohn's disease (CD, n = 97), ulcerative colitis (UC, n = 53), Clostridioides difficile infection (CDI, n = 9), primary food allergy (PFA, n = 11), pollen-associated food allergy (n = 25) and non-inflammatory controls (n = 78). Results were correlated with clinical and endoscopic IBD activity scores.
Results: fECP was significantly elevated in CD, UC, CDI and PFA compared to controls. fCal was significantly increased in CD, UC and CDI. fECP had lower diagnostic accuracy than fCal (area under the curve (AUC) = 0.88) in differentiating between endoscopically active and inactive patients with IBD (AUC = 0.77, ROC analysis). In contrast to fCal, fECP correlated negatively with age and levels were also elevated in clinically and endoscopically inactive patients with IBD <45 years (endoscopically inactive IBD vs controls; AUC for fECP = 0.86; AUC for fCal = 0.62). However, in those patients with low inflammatory activity (fCal <250 mg/kg), high fECP indicated the need for treatment modification or surgery (fECP <200 µg/kg = 22%; 200–600 µg/kg = 44%; >600 µg/kg = 82%) at month 48 of follow-up.
Conclusions: fECP is a diagnostic and prognostic marker in young patients with IBD in remission.
The Arctic Svalbard Archipelago hosts the world’s northernmost cold-water ‘carbonate factories’ thriving here despite of presumably unfavourable environmental conditions and extreme seasonality. Two contrasting sites of intense biogenic carbonate production, the rhodolith beds in Mosselbukta in the north of the archipelago and the barnacle-mollusc dominated carbonate sediments accumulating in the strong hydrodynamic regime of the Bjørnøy-Banken south of Spitsbergen, were the targets of the RV Maria S. Merian cruise 55 in June 2016. By integrating data from physical oceanography, marine biology, and marine geology, the present contribution characterises the environmental setting and biosedimentary dynamics of these two polar carbonate factories. Repetitive CTD profiling in concert with autonomous temperature/salinity loggers on a long-term settlement platform identified spatiotemporal patterns in the involved Atlantic and Polar water masses, whereas short-term deployments of a lander revealed fluctuations of environmental variables in the rhodolith beds in Mosselbukta and at same depth (46 m) at Bjørnøy-Banken. At both sites, dissolved inorganic nutrients in the water column were found depleted (except for elevated ammonium concentrations) and show an overall increase in concentration and N:P ratios toward deeper waters. This indicates that a recycling system was fuelling primary production after the phytoplankton spring bloom at the time of sampling in June 2016. Accordingly, oxygen levels were found elevated and carbon dioxide concentrations (pCO2) markedly reduced, on average only half the expected equilibrium values. Backed up by seawater stable carbon and oxygen isotope signatures, this is interpreted as an effect of limited air-sea gas exchange during seasonal ice cover in combination with a boost in community photosynthesis during the spring phytoplankton bloom. The observed trends are enhanced by the onset of rhodophyte photosynthesis in the rhodolith beds during the polar day upon retreat of sea-ice. Potential adverse effects of ocean acidification on the local calcifier community are thus predicted to be seasonally buffered by the marked drop in pCO2 during the phase of sea-ice cover and spring phyto-plankton bloom, but this effect will diminish should the seasonal sea-ice formation continue to decline. Among the 25 macrobenthos taxa identified from images captured by the lander’s camera system, all but three species were calcifiers contributing to the carbonate production. Biodiversity was found to be much higher in Mosselbukta (21 taxa) compared to Bjørnøy-Banken (8 taxa), which is considered as a result of enhanced habitat diversity provided in the rhodolith beds by the bioengineering crustose alga Lithothamnion glaciale. Filter-feeding activity of selected key species did reveal group-specific but no common activity patterns. Biotic disturbance of the filtering activity was common, in contrast to abiotic factors, with hermit crabs representing the primary trigger. Motion tracking of rhodoliths revealed a high frequency of dislocation, triggered not by abiotic factors but by the activity of benthic invertebrates, in particular echinoids ploughing below or moving over the rhodoliths. The echinoid Strongylocentrotus sp. is the most abundant component of the associated fauna, thereby considerably contributing both to carbonate production and to grazing bioerosion. Together, these results portray a high degree of seasonal as well as short-term dynamics in environmental conditions that despite many similarities support distinctly different communities and biodiversity patterns in the calcifying macrobenthos at the two studied polar carbonate factories.
In-line filtration of intravenous infusion may reduce organ dysfunction of adult critical patients
(2019)
Background: The potential harmful effects of particle-contaminated infusions for critically ill adult patients are yet unclear. So far, only significant improved outcome in critically ill children and new-borns was demonstrated when using in-line filters, but for adult patients, evidence is still missing.
Methods: This single-centre, retrospective controlled cohort study assessed the effect of in-line filtration of intravenous fluids with finer 0.2 or 1.2 μm vs 5.0 μm filters in critically ill adult patients. From a total of n = 3215 adult patients, n = 3012 patients were selected by propensity score matching (adjusting for sex, age, and surgery group) and assigned to either a fine filter cohort (with 0.2/1.2 μm filters, n = 1506, time period from February 2013 to January 2014) or a control filter cohort (with 5.0 μm filters, n = 1506, time period from April 2014 to March 2015). The cohorts were compared regarding the occurrence of severe vasoplegia, organ dysfunctions (lung, kidney, and brain), inflammation, in-hospital complications (myocardial infarction, ischemic stroke, pneumonia, and sepsis), in-hospital mortality, and length of ICU and hospital stay.
Results: Comparing fine filter vs control filter cohort, respiratory dysfunction (Horowitz index 206 (119–290) vs 191 (104.75–280); P = 0.04), pneumonia (11.4% vs 14.4%; P = 0.02), sepsis (9.6% vs 12.2%; P = 0.03), interleukin-6 (471.5 (258.8–1062.8) ng/l vs 540.5 (284.5–1147.5) ng/l; P = 0.01), and length of ICU (1.2 (0.6–4.9) vs 1.7 (0.8–6.9) days; P < 0.01) and hospital stay (14.0 (9.2–22.2) vs 14.8 (10.0–26.8) days; P = 0.01) were reduced. Rate of severe vasoplegia (21.0% vs 19.6%; P > 0.20) and acute kidney injury (11.8% vs 13.7%; P = 0.11) was not significantly different between the cohorts.
Conclusions: In-line filtration with finer 0.2 and 1.2 μm filters may be associated with less organ dysfunction and less inflammation in critically ill adult patients.
Trial registration: The study was registered at ClinicalTrials.gov (number: NCT02281604).
Background: Zika is of great medical relevance due to its rapid geographical spread in 2015 and 2016 in South America and its serious implications, for example, certain birth defects. Recent epidemics urgently require a better understanding of geographic patterns of the Zika virus transmission risk. This study aims to map the Zika virus transmission risk in South and Central America. We applied the maximum entropy approach, which is common for species distribution modelling, but is now also widely in use for estimating the geographical distribution of infectious diseases.
Methods: As predictor variables we used a set of variables considered to be potential drivers of both direct and indirect effects on the emergence of Zika. Specifically, we considered (a) the modelled habitat suitability for the two main vector species Aedes aegypti and Ae. albopictus as a proxy of vector species distributions; (b) temperature, as it has a great influence on virus transmission; (c) commonly called evidence consensus maps (ECM) of human Zika virus infections on a regional scale as a proxy for virus distribution; (d) ECM of human dengue virus infections and, (e) as possibly relevant socio-economic factors, population density and the gross domestic product.
Results: The highest values for the Zika transmission risk were modelled for the eastern coast of Brazil as well as in Central America, moderate values for the Amazon basin and low values for southern parts of South America. The following countries were modelled to be particularly affected: Brazil, Colombia, Cuba, Dominican Republic, El Salvador, Guatemala, Haiti, Honduras, Jamaica, Mexico, Puerto Rico and Venezuela. While modelled vector habitat suitability as predictor variable showed the highest contribution to the transmission risk model, temperature of the warmest quarter contributed only comparatively little. Areas with optimal temperature conditions for virus transmission overlapped only little with areas of suitable habitat conditions for the two main vector species. Instead, areas with the highest transmission risk were characterised as areas with temperatures below the optimum of the virus, but high habitat suitability modelled for the two main vector species.
Conclusion: Modelling approaches can help estimating the spatial and temporal dynamics of a disease. We focused on the key drivers relevant in the Zika transmission cycle (vector, pathogen, and hosts) and integrated each single component into the model. Despite the uncertainties generally associated with modelling, the approach applied in this study can be used as a tool and assist decision making and managing the spread of Zika.
Sepsis is a serious clinical condition which can cause life-threatening organ dysfunction, and has limited therapeutic options. The paradigm of limiting excessive inflammation and promoting anti-inflammatory responses is a simplified concept. Yet, the absence of intrinsic anti-inflammatory signaling at the early stage of an infection can lead to an exaggerated activation of immune cells, including monocytes and macrophages. There is emerging evidence that endogenous molecules control those mechanisms. Here we aimed to identify and describe the dynamic changes in monocyte and macrophage subsets and lung damage in CL57BL/6N mice undergoing blunt chest trauma with subsequent cecal ligation and puncture. We showed that early an increase in systemic and activated Ly6C+CD11b+CD45+Ly6G− monocytes was paralleled by their increased emigration into lungs. The ratio of pro-inflammatory Ly6ChighCD11b+CD45+Ly6G− to patrolling Ly6ClowCD11b+CD45+Ly6G− monocytes significantly increased in blood, lungs and bronchoalveolar lavage fluid (BALF) suggesting an early transition to inflammatory phenotypes during early sepsis development. Similar to monocytes, the level of pro-inflammatory Ly6ChighCD45+F4/80+ macrophages increased in lungs and BALF, while tissue repairing Ly6ClowCD45+F4/80+ macrophages declined in BALF. Levels of inflammatory mediators TNF-α and MCP-1 in blood and RAGE in lungs and BALF were elevated, and besides their boosting of inflammation via the recruitment of cells, they may promote monocyte and macrophage polarization, respectively, toward the pro-inflammatory phenotype. Neutralization of uteroglobin increased pro-inflammatory cytokine levels, activation of inflammatory phenotypes and their recruitment to lungs; concurrent with increased pulmonary damage in septic mice. In in vitro experiments, the influence of uteroglobin on monocyte functions including migratory behavior, TGF-β1 expression, cytotoxicity and viability were proven. These results highlight an important role of endogenous uteroglobin as intrinsic anti-inflammatory signal upon sepsis-induced early lung injury, which modules the early monocyte/macrophages driven inflammation.
Der Maler und Grafiker Georg Heck (1897-1982) führte ein bewegtes Leben: Seinen unbändigen Schaffensdrang konnten weder zwei Weltkriege noch der Verlust seines rechten Augenlichtes schmälern. Das Museum Giersch der Goethe-Universität präsentiert das Œuvre des Frankfurter Künstlers zwischen "Entartung" und Sezession in einer umfangreichen Retrospektive.
Aims: Patients with aortic stenosis (AS) may have concomitant heart failure (HF) that determines prognosis despite successful transcatheter aortic valve implantation (TAVI). We compared outcomes of TAVI patients with low stroke volume index (SVI) ≤35 ml/m2 body surface area in different HF classes.
Methods and results: Patients treated by transfemoral TAVI at our center (n = 1822) were classified as 1) ‘HF with preserved ejection fraction (EF)’ (HFpEF, EF ≥50%), 2) ‘HF with mid-range EF’ (HFmrEF, EF 40–49%), or 3) ‘HF with reduced EF’ (HFrEF, EF <40%). Patients with SVI >35 ml/m2 served as controls. The prevalence of cardiovascular disease and symptoms increased stepwise from controls (n = 968) to patients with HFpEF (n = 591), HFmrEF (n = 97), and HFrEF (n = 166). Mortality tended to be highest in HFrEF patients 30 days post-procedure, and it became significant after one year: 10.2% (controls), 13.5% (HFpEF), 13.4% (HFmrEF), and 23.5% (HFrEF). However, symptomatic improvement in survivors of all groups was achieved in the majority of patients without differences among groups.
Conclusions: Patients with AS and HF benefit from TAVI with respect to symptom alleviation. TAVI in patients with HFpEF and HFmrEF led to an identical, favorable post-procedural prognosis that was significantly better than that of patients with HFrEF, which remains a high-risk population.
Entwicklung und Inbetriebnahme zweier supraleitender 217 MHz CH-Strukturen für das HELIAC-Projekt
(2019)
Im Rahmen der hier vorgestellten Arbeit wurden zwei baugleiche CH-Strukturen für das im Bau befindliche HELIAC-Projekt (HELmholtz LInear ACcelerator) entwickelt und während der Produktion bis hin zu den finalen Kalttests bei 4.2 K begleitet. Zusammen mit der CH-Struktur des Demonstrator-Projektes ermöglichen sie die vollständige Inbetriebnahme und den ersten Strahltest des ersten Kryomoduls des HELIAC's, welcher aus vier Kryomodulen mit insgesamt 12 CH-Strukturen besteht. Im Vergleich zu bisherigen CH-Strukturen wurde das Design der Kavitäten im Rahmen dieser Dissertation grundlegend überarbeitet und optimiert. Durch die Entfernung der Girder und die konisch geformten Endkappen konnte die Stabilität der neuen CH-Strukturen deutlich erhöht werden, sodass die Drucksensitivität im Vergleich zur ersten CH-Kavität des Demonstrator-Projektes um ca. 80% reduziert werden konnte. Durch die nach außen gezogenen Lamellen der dynamischen Tuner konnte die mechanische Spannung sowie die benötigte Anzahl an Lamellen und damit das Risiko für das Auftreten von Multipacting reduziert werden. Das verringerte Risiko für Multipacting durch die entsprechenden Optimierungen der Kavitäten konnte durch die dauerhafte Überwindung aller Multipacting-Barrieren in den späteren Messungen verifiziert werden. Die Optimierung beider Kavitäten erfolgte dabei mit Hilfe der Simulationsprogramme CST Studio Suite und Ansys Workbench.
Beide Kavitäten wurden von der Firma Research Instruments (RI) gefertigt und während der gesamten Konstruktion durch diverse Zwischenmessungen überwacht. Nach jedem einzelnen Produktionsschritt wurden alle Einflüsse auf die Resonanzfrequenz so präzise ermittelt, dass die Zielfrequenz bei 4.2 K auf mehr als 1‰ genau erreicht werden konnte. Sowohl während der Zwischenmessungen als auch während den finalen Messungen bei 4.2 K wurden automatisierte Aufzeichnungsroutinen verwendet, welche eine sekundengenaue Auslese der Messdaten und damit eine hohe Messgenauigkeit ermöglichten. Im Hinblick auf die Komplexität der CH-Strukturen sind die geringen Abweichungen von der Zielfrequenz der direkte Beweis dafür, wie erfolgreich und präzise die Auswertungen und daraus folgenden Abschätzungen der einzelnen Zwischenmessungen waren. Insgesamt konnten bis auf die mechanischen Eigenmoden alle Ergebnisse der Simulationen durch entsprechende Messungen in guter Näherung verifiziert werden. In jeder Kavität wurden zwei dynamische Tuner verbaut, welche statische und dynamische Frequenzabweichungen im späteren Betrieb ausgleichen können. Die dynamischen Tuner wurden hinsichtlich ihrer mechanischen Stabilität und der erzeugbaren Frequenzänderung sowie ihrer mechanischen Eigenfrequenzen ausführlich mit Hilfe der Simulationsprogramme CST Studio Suite und Ansys Workbench untersucht und optimiert. Um die Ergebnisse der Simulationen zu überprüfen wurden ein eigens dafür entworfener und in der Werkstatt des Instituts für Angewandte Physik gefertigter Messaufbau verwendet, welcher es ermöglichte alle entscheidenden Eigenschaften der dynamischen Tuner präzise zu vermessen. Insgesamt stellen die ausführlichen Messungen mit Hilfe des entworfenen Aufbaus die bisher umfassendsten Messungen dynamischer Balgtuner innerhalb supraleitender CH-Strukturen dar und zeigen, mit welchen Abweichungen zwischen Simulationen und Messungen bei zukünftigen Kavitäten zu rechnen ist. Auch die Feldverteilung entlang der Strahlachse wurde während der Produktion der Kavitäten mit Hilfe der Störkörpermessmethode überprüft. Die dadurch ermittelten Werte stimmten mit einer maximalen Diskrepanz von 9% sehr gut mit den Simulationen überein.
Um eine möglichst gute Oberflächenqualität zu garantieren wurden an der Innenfläche beider Strukturen mindestens 200µm mit einer Mischung aus Fluss-, Salpeter und Phosphorsäure in mehreren Schritten abgetragen. Durch das Aufteilen der Behandlung in einzelne Schritte konnte der Einfluss der Oberflächenbehandlung auf die Resonanzfrequenz besser abgeschätzt und vorausgesehen werden. Dies führte, zusammen mit den Messungen zur Bestimmung der Drucksensitivität und der thermischen Kontraktion der Kavität beim Abkühlen, zu der hohen Übereinstimmung der gemessenen finalen Resonanzfrequenz mit der Zielfrequenz.
Die abschließenden Kalttests der beiden Kavitäten, ohne Heliummantel, wurden am Institut für Angewandte Physik der Johann Wolfgang Goethe Universität in einem vertikalen Bad-Kryostaten durchgeführt. Die erste CH-Struktur konnte erfolgreich bis zu einem maximalen Feldgradienten von 9.2 MV/m getestet werden, was einer effektiven Spannung von 3.37 MV entspricht. Die unbelastete Güte fiel dabei von anfangs 1.08 ∙ 109 auf 2.6 ∙ 108 ab. Die Vorgaben des HELIAC-Projektes liegen bei einem Beschleunigungsgradienten von 5.5 MV/m mit einer unbelasteten Güte von mindestens 3 ∙ 108. Diese Werte wurden von der ersten Kavität deutlich übertroffen, sodass sie für den Betrieb innerhalb des ersten Kryomoduls uneingeschränkt verwendet werden kann.
Bei der zweiten Kavität trat beim Abkühlen auf 4.2 K ein Vakuumleck auf, welches unter Raumtemperatur nicht detektierbar war. Aufgrund der schlechten Vakuumbedingungen innerhalb der Kavität konnten somit keine Messungen hinsichtlich der Leistungsfähigkeit durchgeführt werden, solange das Kaltleck vorhanden war. Ein erneuter Kalttest der Kavität nach Beseitigung des Lecks konnte zeitlich nicht mehr im Rahmen dieser Arbeit durchgeführt werden und ist aus diesem Grund Gegenstand nachfolgender Untersuchungen.
Insgesamt stellen die Entwicklungen, Untersuchungen und Messungen im Rahmen der hier vorgestellten Dissertation einen entscheidenden Schritt zur Inbetriebnahme des ersten Kryomoduls des HELIAC's sowie der Entwicklung weiterer CH-Kavitäten dar. Das überarbeitete Design der CH-Strukturen hat sich als erfolgreich erwiesen, weswegen es als Ausgangspunkt für die Entwicklung aller nachfolgenden CH-Strukturen des HELIAC, bis hin zur Fertigstellung des kompletten Beschleunigers, verwendet wird.
Von November 2018 bis April 2019 hat die Arbeitsstelle »Medizinethik in der Klinikseelsorge« am Fachbereich Katholische Theologie der Goethe Universität Frankfurt am Main eine partizipative Studie über Herausforderungen und Kompetenzprofile der Medizinethik in der Klinikseelsorge durchgeführt.
Im Zentrum dieser Broschüre stehen die Ergebnisse, die eine Gruppe von 19 Klinikseelsorger*innen erarbeitet hat. Welche Kompetenzen benötigen Klinikseelsorger*innen, um medizinethisch tätig zu sein? Welche Herausforderungen erleben sie im Alltag? Wie sehen sie die Zukunft der Medizinethik? Diese Broschüre präsentiert einige der Ergebnisse in aufbereiteter Form.
Transport mechanism of a multidrug resistance protein investigated by pulsed EPR spectroscopy
(2019)
In human several diseases result from malfunctions of ATP-binding cassette (ABC) systems, which form one of the largest transport system superfamily. Many ABC exporters contain asymmetric nucleotide-binding sites (NBSs) and some of them are inhibited by the transported substrate.1 For the active transport of diverse chemically substrates across biological membranes, ABC transport complexes use the energy of ATP binding and subsequent hydrolysis. In this thesis, the heterodimeric ABC exporter TmrAB2,3 from Thermus thermophilus, a functional homolog of the human antigen translocation complex TAP, was investigated by using pulsed electron-electron double resonance (PELDOR/DEER) spectroscopy. In the presence of ATP, TmrAB exists in an equilibrium between inward- and outward-facing conformations. This equilibrium can be modulated by changing the ATP concentration, showing asymmetric behaviour in the open-to-close equilibrium between the consensus and the degenerate NBSs. At the degenerate NBS the closed conformation is more preferred and closure of one of the NBSs is sufficient to open the periplasmic gate at the transmembrane domain (TMD).3 By determining the temperature dependence of this conformational equilibrium, the thermodynamics of the energy coupling during ATP-induced conformational changes in TmrAB were investigated. The results demonstrate that ATP-binding alone drives the global conformational switching to the outward-facing state and allows the determination of the entropy and enthalpy changes for this step. With this knowledge, the Gibbs free energy of this ATP induced transition was calculated. Furthermore, an excess of substrate, meaning trans-inhibition of the transporter is resulting mechanistically in a reverse transition from the outward-facing state to an occluded conformation predominantly.3 This work unravels the central role of the reversible conformational equilibrium in the function and regulation of an ABC exporter. For the first time it is shown that the conformational thermodynamics of a large membrane protein complex can be investigated. The presented experiments give new possibilities to investigate other related medically important transporters with asymmetric NBSs or other similar protein complexes.
The dissertation studied reused Roman coins (AD 100 – 400) that were found in medieval cemeteries (AD 400 – 1400) in the territory of Serbia. The evaluation process was traced through three different periods and cultural contexts: (1) in the period of Roman domination in the central Balkans (AD 1 – 400), i.e. the “primary context” of their use and circulation; (2) in the time of transition from the late antiquity to early medieval period (AD 400 – 700); and (3) in the high and late Middle Ages (AD 900 – 1400), where the last two were considered to be a “secondary context” in which the Roman coins were no longer a valid currency.
It was observed that the reused Roman coins, as a distinctive category of archaeological finds, impose a necessity for reconsideration of the relationship between the disciplines of archaeology and numismatics; encouraging a greater cooperation and discussion between the two. Considering the use and evaluation of Roman coins in their “primary context”, it is possible to presume that the strength of the political Roman system was the crucial factor in the formation and maintaining the stability of the value of Roman coins. The act of reuse should not be automatically equalized with recycling; implying only to use value, but at the same time it was not possible to assume that the value was formed only on a purely symbolical level. The (re)use of Roman coins in the funeral practices from c. AD 400 to 700 was considered to be a part of wider and occasional practice of incorporating older Roman issues in the coin pool by the “barbarian” or Byzantine authorities. It could be then concluded that the value of Roman coins was understood more as a potential attribute than as a fixed category; enabling one to simultaneously “overvalue “ and “undervalue” these objects. In the period from c. AD 900 to 1400, the reuse of Roman coins was detected only within the cemeteries of the peasantry and in a context of gradual increase of general coin use in the central Balkan communities of the Middle Ages. This was understood as an indicator that the Roman coins were not perceived as particularly valuable per se, but since the were recognized as category of objects that became more important in defining social relationships they were then incorporated in the funeral rituals and reinterpreted by the medieval population.
Objective: Studies using diffusion tensor imaging (DTI) to investigate white matter (WM) microstructure in youths with conduct disorder (CD) have reported disparate findings. We investigated WM alterations in a large sample of youths with CD, and examined the influence of sex and callous-unemotional (CU) traits.
Method: DTI data were acquired from 124 youths with CD (59 female) and 174 typically developing (TD) youths (103 female) 9 to 18 years of age. Tract-based spatial statistics tested for effects of diagnosis and sex-by-diagnosis interactions. Associations with CD symptoms, CU traits, a task measuring impulsivity, and the impact of comorbidity, and age- and puberty-related effects were examined.
Results: Youths with CD exhibited higher axial diffusivity in the corpus callosum and lower radial diffusivity and mean diffusivity in the anterior thalamic radiation relative to TD youths. Female and male youths with CD exhibited opposite changes within the internal capsule, fornix, posterior thalamic radiation, and uncinate fasciculus. Within the CD group, CD symptoms and callous traits exerted opposing influences on corpus callosum axial diffusivity, with callous traits identified as the unique clinical feature predicting higher axial diffusivity and lower radial diffusivity within the corpus callosum and anterior thalamic radiation, respectively. In an exploratory analysis, corpus callosum axial diffusivity partially mediated the association between callous traits and impulsive responses to emotional faces. Results were not influenced by symptoms of comorbid disorders, and no age- or puberty-related interactions were observed.
Conclusion: WM alterations within the corpus callosum represent a reliable neuroimaging marker of CD. Sex and callous traits are important factors to consider when examining WM in CD.