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The mammary gland of mice serves as a model system for studying differentiation in an adult animal. With the beginning of pregnancy the mammary epithelial cells undergo functional differentiation to produce milk for nourishment of the young. The transcription factor STAT5 mediates the cytokine-induced induction of the milk proteins during pregnancy and lactation in response to the lactogenic hormone prolactin. In addition to transcription factors that mediate transcription of their target genes by recruitment of the general transcription machinery to the DNA-regulator regions, specific post-translational modifications on the N-terminal tails of histones also influence expression. These histone modifications can affect chromatin structure, which is a main control barrier to transcription, by directly altering accessibility of the chromatin and by providing binding surfaces for protein complexes that can further modulate chromatin structure and regulate transcription. In this work N-terminal histone modification marks that associate with open, permissive and repressed chromatin where investigated in different regions of two milk protein genes during mammary gland development. Using the chromatin-immunoprecipitation (ChIP) assays increased acetylation of histone H3 and H4 at the 5’ region, promoter and transcribed regions of β-casein and whey acidic protein (WAP) gene were observed during pregnancy and lactation when these genes are expressed. The presence of these histone marks, which are associated with a relaxed chromatin structure, correlates with the recruitment of STAT5A and STAT5B to the promoter containing regulatory regions as well as the detection of the phosphorylated RNA polymerase II in the transcribed gene region. Both di- and tri-methylation of histone H3 lysine 4, that mark permissive and active chromatin respectively, were enriched in tissue from pregnant and lactating mice. In comparison tri-methylation of histone H3 lysine 27, a mark associated with repressed chromatin, could be observed during all stages of mammary gland tissue investigated, but appears slightly elevated in the tissue from virgin mice when β-casein and WAP are not expressed. Together these results illustrate that the expression of the two milk proteins genes at distinct stages of mammary gland differentiation correlate with specific changes in histone modifications. In mammary gland tissue STAT5A is important for the mammary gland epithelial cell differentiation and survival during lactation. Yet many genomic target regions that STAT5A actually bind and which are involved in regulation of gene expression during lactation still remain unknown. Therefore, the second part of this thesis was focused on the identification of novel STAT5-binding sites that are differentiation specifically bound by STAT5A in mammary gland tissue during lactation. In summary, the results demonstrate that the ChIP cloning method was employed successfully for the cloning of a STAT5A library and the identification of new STAT5 targets in mammary gland tissue from lactating mice. Nine of the newly identified STAT5-binding targets were verified to differentiation specifically bind STAT5A and STAT5B in vivo during pregnancy and lactation. Even though the selection of the tested clones was biased towards STAT5-binding sites near or at known genes and for multiple STAT5 binding sites, only one out of the nine validated STAT5-binding regions is located in a traditional defined proximal promoter. Except for two STAT5-binding regions, which are located at least 10 kb from the next annotated known gene, six are located in the intronic regions of annotated mRNA or EST transcripts. Three, out of four verified STAT5-binding regions tested in reporter gene assays for functionality, display the ability to drive reporter gene activity in a STAT5 dependent manner. This transcriptional activity is due to the STAT5-binding sites within the cloned regions as determined by mutational analysis. Of special interest is a STAT5-binding region that contains one STAT5 and three STAT-like sites within a 339 bp region that is evolutionary conserved by approximately 80% between the mouse and human genome. This STAT5-binding region lies about 62 kb 5 prime of the nuclear factor I/B gene. The expression of the NFI/B mRNA transcript correlates with the in vivo association of STAT5A to the conserved region during the mammary gland differentiation. Together, these results suggest that this STAT5-binding might be a cis-regulatory region that potentially mediates STAT5 induced NFI/B gene expression in mice during lactation.
This thesis deals with the analysis of “presolar” silicates and oxides by high resolution mass spectrometry and electron microscopy techniques. This “stardust” was identified by its extreme oxygen isotopic anomalies, which point to nucleosynthetic reactions in stellar interiors, in the carbonaceous chondrite Acfer 094. Isotopic, chemical and mineralogical studies on these stardust grains therefore allow the testing of astrophysical questions on Earth, which are otherwise only accessible by spectroscopy and theoretical models. The class of presolar silicates has been identified only six years ago in 2002, although it was known already from spectroscopic observations that silicates represent the most abundant type of dust in the galaxy. The development of the “NanoSIMS” was a crucial step in this respect, because this ion probe with its superior spatial resolution of only 50 nm allowed the detection of the typically 300 nm sized presolar silicates. A total of 142 presolar silicates and 20 presolar oxides were identified within Acfer 094, whose matrix therefore contains 163 ± 14 ppm presolar silicates and 26 ± 6 ppm presolar oxides. This is among the highest amounts reported so far for any primitive solar system material. The majority of detected stardust grains derive from asymptotic giant branch stars of 1 – 2.5 Msun and close-to-solar or slightly lower-than-solar metallicity. However, by measuring the Si isotopic compositions of some enigmatic grains, it could be shown that there is a sub-class of presolar silicates characterized by an extreme enrichment of 17O and a moderate enhancement of 30Si relative to solar, whose origins might be explained by formation in binary stellar systems. About 10% of all grains exhibit an enrichment in 18O and some of them also of 28Si relative to solar, which most likely point to an origin in type II supernova explosions. The Si isotopic measurements also allowed to quantify the effect of the s-process on the Si isotopes in low-mass asymptotic giant branch stars. The results agree well with theoretical predictions. The grains were furthermore characterized by SEM and the chemistries of about half of the grains were determined by Auger electron spectroscopy. The majority of grain morphologies are consistent with what is expected from condensation experiments. However, a lot of grains are altered by Fe-rich minerals, which are either of primary condensation or of secondary ISM or solar nebula origin. Furthermore, complex presolar grains consisting of refractory Al-rich grains attached to silicate material could be identified, which have been predicted by condensation theory and observational evidence. Nine presolar silicates were analyzed by combined NanoSIMS/TEM studies. The majority of grains are Mg-rich and amorphous, which is in contrast to astrophysical evidence, which mainly postulate crystalline Mg-rich and amorphous Fe-rich circumstellar condensates. However, the grains might have been rendered amorphous by secondary processes in the ISM or could have condensed under non-equilibrium, low-temperature conditions in the circumstellar outflow. The grains are more likely characterized by a variable, pyroxene-like chemistry, which could be a result of sputtering in the ISM, which preferentially removes Mg. The detected crystalline presolar silicates in this study and in other work are all olivines, whereas grains with a pyroxene stoichiometry are all amorphous except one. This supports astrophysical models which point to different formation pathways for these two types of grains and therefore different crystallinity. However, the relatively high Fe content of three detected presolar olivines in this study and in other work is in contrast to astrophysical evidence and theoretical considerations, which predict essentially Fe-free crystalline grains. It is therefore possible that the infrared spectra might also be compatible with less Mg-rich olivines. The only crystalline presolar silicate with a pyroxene-like stoichiometry is the unusual grain 1_07: although it is chemically enstatite, the electron diffraction pattern could only be indexed to silicate perovskite, which is stable above ~23 GPa. The discovery of a high-pressure phase of presolar origin shows that dust grains encountering interstellar shocks might not necessarily be completely destroyed. In astrophysical models it is in principle also possible that a fraction of larger grains might survive such a shock wave encounter as a high-pressure modification, which is supported by this discovery.
The present study was elaborated within the scope of the INTAFERE (Integrated Analysis of Mobile Organic Foreign Substances in Rivers) project which investigates the occurrence of xenobiotics in small freshwater streams with particular consideration of social impact factors. The aim of this study is to investigate the seasonal and spatial variance of organic micropollutants in small fresh water streams and to identify possible sources and sinks. Therefore four small freshwater river systems in Hesse, Germany, have been investigated with respect to common organic pollutants such as: the organophosphates tri-n-butyl phosphate (TBP), tris(2-butoxyethyl)phosphate (TBEP), tris(2-chloroethyl)phosphate (TCEP), tris(1-chloro-2-propyl)phosphate (TCPP), and tris(1,3-dichloro-2-propyl)phosphate (TDCPP), the synthetic musk fragrances 1,3,4,6,7,8-hexahydro-4,6,6,7,8,8-hexa-methylcyclopenta-[g]-2-benzopyran (HHCB) and 7-acetyl-1,1,3,4,4,6-hexamethyl-1,2,3,4-tetrahydronaphthalene (AHTN), the endocrine disruptors bisphenol A (BPA), 4-tert-octylphenol (OP) and the technical isomer mixture of 4-nonylphenol (NP), the herbicide terbutryn [2-(t-butylamino)-4-(ethylamino)-6-(methylthio)-s-triazine] as well as the insect repellent N,N-diethyl-m-toluamide (DEET). Water samples were collected in the time span from September 2003 to September 2006 at 26 sampling locations. The samples were extracted with solid phase extraction (SPE) and analyzed by coupled gas chromatography-mass spectrometry (GC-MS). For quantification the internal standard method was used. The results of the study showed an ubiquitous occurrence of organic pollutants in the fresh water streams of the study area. The organophosphates have been detected in 90 % of the water samples with mean concentrations of 502 ng/l (TCPP), 276 ng/l (TBP), 183 ng/l (TBEP), 118 ng/l (TCEP) and 117 ng/l (TDCPP). Sewage treatment plant (STP) effluents were identified as the dominating source for the chlorinated organophosphates as well as for the synthetic musk fragrances and the insect repellent DEET in the river systems. Consequently the highest concentrations were observed in the Schwarzbach system characterized by the highest proportion of waste water compared to the other river systems. Mean concentration levels of the synthetic musk fragrances HHCB and ATHN were 141 ng/l and 46 ng/l, respectively and 124 ng/l in case of DEET. The synthetic musk fragrances showed a clear seasonal trend with significantly lower concentrations in summer times compared to winter times, which is ascribed to stronger photodegradation and volatization during summer times. In contrast, mean DEET concentrations and loads were significantly higher in summer than in autumn, winter and spring, in parallel with the main insect season. The concentrations of the endocrine disruptors BPA, NP and OP in the river water samples ranged from <20 ng/l to 1927 ng/l, <10 ng/l to 770 ng/l, and <10 ng/l to 420 ng/l, respectively. Whereas OP was present in about 2/3 of the samples, NP and BPA could only be detected in 56% and 13% of the water samples, respectively. BPA levels exceeded in two samples the predicted no-effect concentration (PNEC) for water organisms. In case of NP, highest concentrations and loads were found in September 2003 and decreased significantly since then. In contrast, concentrations and loads of OP which serves in a similar application field remained nearly constant during the sampling period. The decrease of NP can be attributed to the implementation of the European Directive 2003/53/EG, which restricts the use of nonylphenols and nonylphenol ethoxylates since January 2005. However, at the end of the sampling period in September 2006, NP could still be detected at mean concentrations of 18 ng/l in the river waters of the sampling area. Furthermore, absence of NP in several samples from associated STP effluents indicate that the STPs cannot be the only sources for NP found in the river water. The herbicide terbutryn was present in the rivers during the whole sampling period from September 2003 to September 2006 despite a ban on its use as a herbicide from January 2004 on. Terbutryn levels ranged from < 4 ng/l to 5600 ng/l, showing a clear spatial pattern with high terbutryn concentrations in the Weschnitz and Modau river systems and significantly lower terbutryn levels in Schwarzbach and Winkelbach. Results from the analysis of two STP effluents discharging into the Weschnitz and the Modau, respectively, indicate that terbutryn enters the rivers from this source. Furthermore, terbutryn concentrations and loads showed a clear seasonal trend with significantly higher levels in summer and autumn. Obviously, the ban on agricultural use of terbutryn at the end of 2003 had no discernable influence on terbutryn concentration in the rivers because there was no trend of decreasing.
The development of benthic foraminiferal assemblages during the past 6,000 yrs was investigated in Holocene sediment cores from three carbonate platforms (Turneffe Islands, Lighthouse Reef, and Glovers Reef) of Belize, Central America. Foraminiferal assemblages and their diversity were determined in different time periods to identify their dependence on environmental factors, such as lagoonal age, lagoonal depth, water circulation, substrate, bottom-water temperature, and salinity. Geochemical proxies (δ18O and δ13C), obtained from the common larger foraminifer Archaias angulatus were used to estimate Holocene seasonal BW-temperatures and climate variabilities. A total of 51 samples were taken from 12 vibracores for taxonomic determination and 10 to 15 subsamples of 32 tests of Archaias angulatus were used for stable oxygen and carbon isotope analyses. Based on cluster analyses, seven benthic foraminiferal assemblages are distinguished during the Holocene. The three platforms exhibit characteristic differences in benthic foraminiferal fauna and diversity, which are controlled by their respective environments during the last 6,000 yrs. Turneffe Islands has four benthic foraminiferal assemblages, which are typical for restricted lagoons with fluctuating salinity. Lighthouse Reef is inhabited by two benthic foraminifera associations, which are characteristic of high water exchange with the surrounding ocean and clear waters. Glovers Reef is characterized by two benthic foraminiferal assemblages, which occur in deeper lagoons with slow water circulation. In general, during the Holocene, the highest mean diversity, evenness, and richness of benthic foraminifera were found in the Turneffe Islands and the lowest occurred at Glovers Reef. The foraminiferal faunas of the Lighthouse and Glovers Reefs had been in a “Diversification Stage” since 6,000 yrs, whereas the foraminiferal fauna of the Turneffe Islands reflects the development from a “Colonisation” (~4,000 yrs BP) to a “Diversification Stage” (~2,000 yrs to present time). Lagoonal depth, water circulation, substrate, and BW-temperature have higher influence on foraminiferal diversity as compared to lagoonal size and age. The negative correlation between diversity and lagoonal depth is based on differences in light intensity and substrate. In contrast to Lighthouse Reef, the Turneffe Islands and Glovers Reef show decreasing diversity of benthic foraminifera with increasing lagoon depth, due to finer sediment, turbid waters and/or dense mangrove growth, which reduce the light intensity and the number of species. Water Circulation also affected the benthic foraminifera modes of living and their diversity during the last 6,000 yrs. Increasing abundances of infaunal taxa refer to restricted circulation and/or lower oxygen conditions, as assumed for the Turneffe Islands and Glovers Reef. Increasing abundances of epifaunal foraminifera, as observed in the Lighthouse Reef indicate better circulation and/or higher oxygen conditions. Holocene BW-temperature reconstructions based on δ18O of single Archaias angulatus tests do not correspond to typical Holocene climate models of the Caribbean. In the Belize area, mean BW-temperature trends indicate local climate variations. A decrease of δ13C values during the last 1,000 yrs could be related to the “Suess Effect”. The seasonal BW-temperature variations within single large benthic foraminifera tests correspond to present-day temperature fluctuations in the lagoons, and indicate higher temperatures in Summer and Autumn and lower temperatures in Winter and Spring.
Cytochrome P450 epoxygenases of the 2C family (CYP2C) are highly expressed in the endothelium and metabolize arachidonic acid to different regioisomers of epoxyeicosatrienoic acids (EET). They have a number of roles in the regulation of vascular tone and homeostasis by activating different signal transduction pathways and have recently been reported to be involved in proliferation and angiogenesis. However, the exact mechanisms by which epoxygenases regulate angiogenesis are still unclear. Therefore, the initial aim of the present study was to characterize the relevance of major signalling molecules that are involved in angiogenesis and to investigate possible signalling pathways involved. Initially the effect of CYP2C9 overexpression on expression levels of EphB4, a tyrosine kinase that plays a role in a number of developmental processes, was investigated. EphB4 protein expression was increased in CYP2C9 overexpressing cells without any effects on expression levels of its ligand ephrinB2. To clarify whether EphB4 is a critical determinant of CYP2C9-induced angiogenesis, endothelial cell sprouting was assessed using a collagen gel-based in vitro angiogenesis assay. Following transfection with EphB4 antisense or scrambled oligonucleotides, capillary-like structures were clearly present after 24 hours in cells overexpressing CYP2C9, while EphB4 downregulation abolished CYP2C9-induced sprouting. In addition stimulation of human umbilical vein endothelial cells with VEGF resulted in an increase in CYP2C expression and a subsequent increase of 11,12-EET production; an effect that was abolished by the CYP epoxygenases inhibitor MSPPOH as well as when cells were infected with a dominant negative mutant of AMPK. In vivo 11,12-EET treatment increased EphB4 expression in mesenteric arteries as well as in Matrigel plugs; an effect that was abolished when plugs were impregnated at the same time with small interfering RNA (siRNA) for EphB4. Furthermore, impregnation of Matrigel plugs with VEGF resulted in endothelial cell and smooth muscle cell recruitment into a Matrigel plug and this effect was mediated by CYP2C9-derived EETs as it was prevented by 14,15-EEZE. When infiltration of EET impregnated plugs with endothelial cells and pericytes/smooth muscle cells in vivo was compared to the effects seen in VEGF treated plugs, it was apparent that only EET treatment resulted in the formation of tube like structures that were covered by smooth muscle cells. Therefore, the final aim of the study was to further define the consequences of EET signalling in vivo as well as to characterize its physiological relevance. This hypothesis could be assessed by isolectin injection through the tail-vein where isolectin was taken up only by the EET-impregnated plug. Moreover ultrasound measurements revealed accumulation of contrast agent in EET impregnated plugs compared to control plugs. Taken together our findings emphasize that CYP2C plays a crucial role in the vessel formation process by modulating the effects mediated by two important control elements of the angiogenic response, namely VEGF and EphB4. CYP2C-derived EETs not only participate as second messengers in the angiogenic response, but have the potential to influence much more than angiogenesis by enhancing smooth muscle cell/pericyte recruitment to endothelial cell tubes to promote vascular maturation.
In this thesis I have investigated the regulation of eicosanoid synthesizing-enzymes by cannabinoid receptor agonists. Rat renal mesangial cells were used as a model system. I could show that all three (CB1, CB2, and GPR55) cannabinoid receptors are expressed on the mRNA level in rat renal mesangial cells – but with differing expression profiles. The CB1 and GPR55 receptors are expressed in comparable amounts, whereas the CB2 receptor is considerably less expressed than the CB1 and the GPR55 receptors. Furthermore I could show that stimulation of renal mesangial cells with CB1 receptor agonists, such as R(+)MA or ACEA, increased IL-1β-induced cPLA2, sPLA2-IIa, and COX2 protein and mRNA expression which subsequently led to an enhanced IL-1β-induced PGE2 formation. Additionally, the IL-1β- induced sPLA2-IIa promoter activity was also increased by CB1 receptor stimulation. Besides the modulated expression of the eicosanoid synthesizing enzymes, I could show that CB1 agonists also led to an increase of IL-1β-induced iNOS expression and subsequent NO formation. In contrast, stimulation with CB2 selective agonists led to a decrease in IL-1β- induced sPLA2-IIa protein expression and PGE2 formation. Accordingly, the IL-1β-induced sPLA2-IIa promoter activity was also reduced by CB2 receptor agonists. IL-1β-induced iNOS expression and subsequent NO formation were not influenced by CB2 recptor activation. Matching the results I obtained with CB1 receptor agonists on IL-1β-induced PGE2 formation, I could observe an increased cPLA2 protein and mRNA expression with a subsequent increase in IL-1β-induced PGE2 formation by GPR55 stimulation. Stimulation with THC, an unselective CB agonist, increased the IL-1β-induced sPLA2-IIa protein expression and subsequently led to an enhanced IL-1β-induced PGE2 formation. Subjecting the cells to higher THC concentrations surprisingly led to a reduction of the IL-1b-induced sPLA2-IIa protein expression and PGE2 formation. A possible explanation may be the differential expression of the three CB receptors. At low concentrations THC may predominantly activate CB1 and GPR55 and with increasing concentration CB2 receptors may also be activated, slightly reversing the enhancing effect. Moreover, I could show that the CB1 receptor stimulation mediated phosphorylation and hence the activation of ERK1/2 MAPK. Additionally to ERK1/2, there was also a phosphorylation and activation of NFkB observed by CB1 receptor stimulation. In my thesis I could show for the first time that PPARα was activated by IL-1β in rMC. The IL-1β-induced PPARα promoter activity was completely inhibited by addition of the CB2 receptor agonist, JWH015. These findings were confirmed by inhibition of the IL-1β-induced PGE2 formation by a PPARα antagonist (MK-886). In summary, I could show that activation of CB1 receptors in our system led to a worsening of an inflammatory condition, whereas activation of the CB2 receptors led to the complete opposite; namely a reduction of the inflammatory response by reducing the sPLA2-IIa expression and PGE2 formation. GPR55 activation did not display any alteration of inflammatory conditions, since the classical inflammatory pathway was not influenced.
Rwanda entered independence following a transition marked by violent internecine conflict. The conflict was stoked by the departing colonial rulers as they sought to place control of the levers of state in the hands of an ethnic majority, which they had hitherto marginalised in favour of a minority they now sought to exclude. It carried on into the country’s post-colonial politics. For nearly three decades Rwanda’s postcolonial rulers presided over an ethnocracy that perpetuated the negative colonial legacy of ethnic division. They systematically practiced a politics of exclusion and repression that placed the country’s long-term stability under threat, eventually led to civil war, and culminated in the genocide of 1994. After the genocide and the defeat and overthrow of the ancien regime of ethnic supremacists, the new ruling elite - most of whom had spent nearly three decades in exile or been born there - embarked on re-building a collapsed state and re-ordering the country’s politics. The last fourteen years have witnessed deliberate efforts to re-orient the country away from three decades of politics of division and exclusion under the First and Second Republics, towards a system which privileges national reconciliation and unity, equity, and inclusion. This paper examines developments in post-1994 Rwanda against the background of pre-1994 politics and society, and the factors that led to and facilitated the war that culminated in the genocide and eventual overthrow of the Second Republic. It provides insights into the efforts and achievements made by the new ruling elites in pursuit of long-term peace and stability. A great deal, however, remains inadequately explored, including political organisation and the role of political parties, economic reform and management, and the reform and management of the security sector, all of which are the focus of on-going research.
Since independence, the government of Botswana has practiced an exclusive language policy in which only English has been used in government circles at the exclusion of all the 26 languages represented in the country, with a limited use of the national language, Setswana. However, in recent years more positive statements have been heard in Parliament, opening up to recognize the use of other languages in education and society. These statements have provided a conducive environment for Non-governmental organizations to develop other languages for use in education and out-of-school literacy. This paper focuses on the work of one such organization. It reports on a project this organization is undertaking to revive the language and culture of the Wayeyi people in North Western, and Central Botswana. It gives findings on attitudes towards Shiyeyi as a language of instruction for literacy and shows how the preference expressed for Shiyeyi has great potential for a literacy program.
Three-dimensional structure of the glycine-betaine transporter BetP by cryo electron crystallography
(2008)
The soil bacterium Corynebacterium glutamicum has five secondary transporters for compatible solutes allowing it to cope with osmotic stress. The most abundant of them, the transporter BetP, performs a high affinity uptake of glycine-betain when encountering hyperosmotic stress. BetP belongs to the betaine/carnitine/choline/transporter (BCCT) family, and is predicted to have twelve transmembrane helices with both termini facing the cytoplasm. The goal of this thesis is to facilitate understanding of BetP function by determining a three dimensional (3D) model of its structure. Two-dimensional (2D) crystallization of wild-type (WT) BetP has been successfully performed by reconstitution into a mixture of E. coli lipids and bovine cardiolipin, which resulted in vesicular crystals diffracting to 7.5 Å resolution (Ziegler, Morbach et al. 2004). Diffraction patterns of these crystals however showed unfocused spots, generally due to high mosaicity. Better results were obtained by using the constitutively active mutant BetPdeltaC45 in which the first 45 amino acids of the positively charged C-terminus were removed. BetPdeltaC45 crystals obtained under the same conditions for BetP WT were concluded to be pseudo crystals, based on the inconsistence of symmetry. These crystals had BetPdeltaC45 molecules randomly up/downwards inserted into membrane crystals, and cannot be used for structure determination, even though they diffracted up to 7 Å. The problem of pseudo crystal formation could be solved by changing the lipids used for 2D crystallization to a native lipid extract from C. glutamicum cells. This change of lipids improved the crystals to well-ordered packing with exclusive p121_b symmetry. To understand the role of lipids in crystal packing and order, lipids were extracted at different stages during crystallization, and identified by using multiple precursor ion scanning mass spectrometry. The results show that phosphatidyl glycerol (PG) 16:0-18:1 is the most dominant lipid species in C. glutamicum membranes, and that BetP has a preference for the fatty acid moieties 16:0-18:1. Crystallization with synthetic PG 16:0-18:1 proved that an excess of this lipid prevents pseudo crystal formation, but these crystals did not reach the quality as previously achieved by using the C. glutamicum lipids. Apart from the effect of lipids in crystallinity, the concentration and type of salts influenced crystal growth and morphology. High salt conditions (>400 mM LiCl or KCl) yielded tubular crystals, whereas low salt conditions (<300 mM LiCl, NaCl or KCl) led to formation of up to 10 µm large sheet-like crystals. The intermediate concentration gave a mixture of sheet-like and tubular crystals. In terms of resolution, sheets diffracted better than tubes. The sheet-like crystals used for 3D map reconstruction were obtained from a dialysis buffer containing 200 mM NaCl combined with using C. glutamicum lipids. Electron microscopic images were taken from frozen-hydrated crystals using a helium-cooled JEOL 300 SFF microscope or a liquid nitrogen-cooled FEI Tecnai G2 microscope at 300 kV, which allowed optimal data collection and minimized radiation damage to the sample. More than 1000 images of tilt angles up to 50° were taken and evaluated using optical diffraction of a laser beam. The best 200 images were processed with the MRC image processing software package, and 79 images from different tilt angles were merged to the final data set used for calculation of a 3D map at a planar resolution of 8 Å. The structure shows BetPdeltaC45 as a trimer with each monomer consisting of 12 transmembrane alpha-helices. Protein termini and loop regions could not be determined due to the limited resolution of the map. Six of the twelve helices line a central cavity forming a potential substrate-binding chamber. Each monomer shows a central cavity in different sizes and shapes. Thus, the constitutively active BetPdeltaC45 thus forms an unusual asymmetric homotrimer. BetP most likely reflects three different conformational states of secondary transporters: the cytoplasmically open (C), the occluded (O), and the periplasmically open (P) states. The C and O states are similar to BetP WT projection structure, while the P state is discrepant and highly flexible due to the shape and size of the central cavity as well as the lowest intensity of the density. The observation of the P state corresponds well to the constitutively active property of BetPdeltaC45. For the high resolution structure of the C and O states are available, this work presents the first structural information of the P state of a secondary transporter.
The purpose of this study was to reconstruct the depositional environment, the genesis and the composition of Miocene coals in the Kutai Basin, East Kalimantan, Indonesia and to improve our understanding of the factors controlling the organic and inorganic composition, variation of biomarkers, and the peat forming vegetation of the coals. To achieve the aim methods belonging to three different disciplines were applied: 1. Coal petrology (chapter 3) 2. Inorganic geochemistry: sulfur, pyrite and mineral matter distributions (chapter 4) 3. Organic geochemistry of saturated, aromatic hydrocarbon fractions and stable carbon isotopic composition (chapter 5 and 6) Coal petrology Coal developes from peat deposited in mires, mainly in swamps and raised bogs. It is therefore necessary to consider how peat was formed in the past. Coal contains a variety of plant tissues in different degrees of preservation. Tissues of distinct origin are microscopically identifiable and can frequently be related to certain parts of the plant, such as cuticles, woody structures, spores, algal, resin, etc. Together with the particles of less certain origin they are termed macerals which are the petrographic components of coal. During and after deposition of plant remains in sedimentary basins, the organic matter will undergo a sequence of physical, biochemical and chemical changes, which finally results in the formation of coals of increasing rank depending mainly on the temperature influence. The process of coalification begins with practically unaltered plant material and peat, and continues with increasing rank through brown coal, bituminous coal, and finally to anthracite as well as graphite. Coal petrography provides valuable of data of maceral and mineral percentages with reflectance values, which can be used to reconstruct the depositional environment and the coalification processes. In lower rank coals, the material is represented by a group of macerals called huminite, and in bituminous and anthracite coals by a group of macerals called vitrinite. Coal petrography analyses have been carried out on samples from some Miocene coal seams from Kutai Basin. The study has shown that huminite reflectance values of coal samples from ...
Impact of protected areas and land use on regeneration of Acacia woodland’s in Eastern Burkina Faso
(2008)
Regeneration success, persistence strategies (seedlings vs. coppicing), and population trend of Acacia spp. were tested under two land-use regimes in eastern Burkina Faso: (i) protected areas shielded to livestock grazing pressure, to logging, and using early annual fire as a management system; (ii) areas with high human impact (heavily and extensive livestock grazing, harvesting for wood and for medicinal plants). Generally, a good regeneration rate of Acacia species was observed in protected areas and a poor regeneration rate in areas with high human impact. Nevertheless, some species affiliated to the subgenus Aculeiferum as A. dudgeoni and A. polyacantha showed a good regeneration under both land use regimes. Juvenile plants less than 25 cm height of A. dudgeoni and A. gourmaensis increased by 116 to 50 % in areas with human impact as compared to their populations in protected areas. With SCD slopes varying from –0.40 to -0.70, the protected Acacia woodland displayed a stable population structure due to abundance of recruitment, and coppicing persistence (more common in the subgenus Aculeiferum) favoured by early annual fire. Consequently, the protected areas are favourable for Acacia woodland regeneration. Conversely, SCD slopes are positive or close to zero in areas of anthropogenic regime and showed a declining population, especially more marked with the subgenus Acacia due to permanent seed and seedling removal by livestock grazing. Nevertheless, the number of seedlings of some species was higher in areas under human pressure than in protected areas, especially for the subgenus Aculeiferum, improving the genetic variability and thus the long-term maintenance of the population. Key words: Acacia, early fire, land use, sudano-sahelien zone
The present study consists of two parts: The first part is made up of questions concerning the cognitive underpinnings of auditory verbal hallucinations in schizophrenia. As this thesis framed schizophrenia as a multivariate problem, neural correlates to auditory verbal and visual hallucinations were investigated in the second part. The main finding is that vividness of mental imagery was increased in all putative high-risk groups as well as the patients themselves, compared with low-schizotypy controls. Therefore, it seems that vivid imagery is a trait rather than a state marker, and may be related to the genetic liability to develop schizophrenia. However, no evidence was found for a linear relationship between vividness of mental imagery and predisposition to hallucinate. Self-reported imagery vividness and predisposition to hallucinate did not depend on psychomotor speed or intelligence. In addition, individual psychopathology ratings did not correlate significantly with the mental imagery scores. Furthermore, the analysis of the control orientation and the degree of dysfunctional psychopathological status across the schizophrenia spectrum, showed an independence of control orientation and dysfunctional status from each other, as well as from other markers of schizophrenia or schizophrenic-like individuals. As a conclusion, external control orientation seems to be a symptom or a trait marker of schizophrenia. The results lead to the assumption that, beside schizophrenic individuals, first-degree relatives and schizotypy controls have some impairments and visible signs without suffering from the illness directly. This would lead to the further assumption that the illness schizophrenia is not only genetic but also dependent on environmental factors. In the second part of the study, we investigated anatomical and functional brain abnormalities in the schizophrenia patients compared with first-degree relatives and healthy controls. Here, the results followed the continuum of healthy controls, first-degree relatives and schizophrenic patients in the functional and anatomical data sets, and in the language lateralization. The decrease of lateralisation correlated with the severity of symptoms in the patient group. The investigation of visual hallucinations showed activity in higher visual areas during the experience of visual hallucinations in a schizophrenia patient and in a blindfolded subject. The activity in higher visual areas followed the boundaries of category-selective areas in both subjects. In contrast to the memory-related areas found in the schizophrenic patient experiencing visual hallucinations, we did not observe memory-related areas during visual hallucinations induced by blindfolding. This suggests that the neural mechanisms underlying hallucinations in schizophrenia are at least partly distinct from those operational in cortical deafferentation. It is proposed that individual differences in psychopathology, as well as neuropsychological and psychosocial functioning may provide further means to understand the complex and highly dynamic aspects of hallucinations specifically and schizophrenia in general. The enlargement of the subject sample to high-schizotypy controls and first-degree relatives of patients allowed new insights into the mental imagery debate and the dysfunctional connectivity pattern known to be responsible for psychotic symptoms. Further topics of research are discussed.
Visual working memory (WM) and selective attention are fundamental cognitive mechanisms, both operating at the interface between perception and action. They are related because both are postulated to have limits with respect to how much information can be processed. Specifically, selective attention has been implicated as a limiting factor for the storage capacity of visual WM. However, visual WM and attention have been largely studied in isolation and interactions between the two have rarely been addressed. This dissertation aimed at investigating interactions between selective attention and the encoding of information into visual WM in the context of one common characteristic feature, namely their limitation in capacity. An experimental task was used that combined visual search with delayed discrimination and the demands on selective attention and WM encoding were manipulated orthogonally. In each trial participants were presented with a search array consisting of nine different grey geometric shapes. A small L-shaped item that appeared in one of four different orientations and that was coloured either blue or red was placed in the centre of each shape. Participants were instructed to search for predefined target items (Ls oriented 90°) and to memorise the shapes associated with these target items. After a delay phase a probe was presented and participants decided whether it did or did not match one of the memorised shapes. Attentional demand was manipulated by changing the search efficiency in the visual search component of the task (easy vs. difficult search) and WM load was manipulated by the number of targets (1 to 5). A behavioural study was conducted to isolate the processes that allowed participants to successfully encode complex shapes into WM while engaging spatial attention for a visual search task. The data provided evidence for a two-step encoding strategy. In the first step participants selected and memorised only the locations of all target items and only then they encoded the associated shapes at a later step. This strategy allowed them to cope with the interference between WM and attention that would otherwise take place. In the second part of this dissertation interference between visual attention and the encoding into visual WM was investigated on the level of neural activation using functional magnetic resonance imaging (fMRI). Specifically, the hypothesis was tested that the capacity limitation of visual WM is due to common limited-capacity neural resources shared by visual WM and attention. Two separate fMRI experiments were conducted that combined visual search and delayed visual discrimination for either objects (experiment 1) or locations (experiment 2). The results revealed overlapping activation for attention-demanding visual search and object WM encoding in distributed posterior and frontal regions. In the right prefrontal cortex and bilateral insula BOLD activation additively increased with increased WM load and attentional demand. Conversely, the analysis revealed an interaction effect in several visual, parietal, and premotor areas. These regions showed overlapping activation for the two task components and were severely reduced in their WM load response under the condition with high attentional demand. This interaction effect was found in similar frontal and posterior regions when combining visual search and spatial WM encoding in experiment 2. In contrast, regions in the prefrontal cortex were selectively responsive to WM load and differed to some degree depending on the WM domain. Here, activation associated with increased WM load was delayed rather than reduced under high attentional demand. The fMRI results provide convergent evidence that visual selective attention and the encoding of information into WM share, to a high degree, common neural resources. The findings indicate that competition for resources shared by visual attention and WM encoding can limit processing capabilities in distributed posterior brain regions but not the prefrontal cortex. The findings support the view that WM evolves from the recruitement of attentional mechanisms (Cowan, 2001; Wheeler und Treisman, 2002) the very same that act upon perceptual representations as well (Slotnick, 2004; Jonides et al., 2005; Pasternak and Greenlee, 2005; Postle, 2006; Ranganath, 2006). The similarity in the effects of interference between attention and the encoding of objects or locations into WM indicates that the attention-based model of WM encoding is valid across different WM domains. The capacity of visual WM can be limited at various stages of processing. The behavioural and fMRI data presented in this dissertation illustrate that one major bottleneck of information processing arises from the common demands on neural and cognitive resources shared between visual WM and selective attention during the encoding stage.
In response to rising anti-Semitism worldwide, including in some of the strongest democracies, the U.S. Congress passed the Global Anti-Semitism Review Act of 2004. On October 16, 2004, President George W. Bush signed the legislation into law (Public Law 108-332). The Act requires the U.S. Department of State to document and combat acts of anti-Semitism globally. To advance these goals, the Act mandated a one-time report on anti-Semitic acts, which the U.S. Department of State submitted to the U.S. Congress in January 2005. The Act also established within the U.S. Department of State an Office of the Special Envoy to Monitor and Combat Anti-Semitism. On May 22, 2006, Gregg Rickman was sworn in by U.S. Secretary of State Condoleezza Rice as the first Special Envoy.The U.S. Department of State’s January 2005 Report on Global Anti-Semitism surveyed anti-Semitic incidents throughout the world. The annual Country Reports on Human Rights Practices and the annual Report on International Religious Freedom include country-by-country assessments of the nature and extent of acts of anti-Semitism and anti-Semitic incitement. The Office of the Special Envoy to Monitor and Combat Anti-Semitism contributes to the anti-Semitism sections of these annual surveys, pursuant to the Global Anti-Semitism Review Act. Both reports have revealed that incidents of anti-Semitism have become more frequent in recent years. Consistent with the U.S. Department of State’s commitment to assess and counter anti-Semitism, this report is provided to the U.S. Congress to further assess contemporary anti-Semitism by exploring anti-Semitic themes and practices. This report is meant to be used as a resource for increasing understanding of and informing public discourse about contemporary forms of anti-Semitism and for shaping policies to combat anti-Semitism worldwide.
The emperor's new colonies
(2008)
The Colonial Picture Archive in Frankfurt offers a unique pictorial record of German colonial history. For many years the collection was virtually forgotten. However, following painstaking description and digitalisation, the photo documents are now available on the Internet to researchers in Germany and abroad.