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Marginal associations, i.e. floristically impoverished associations at the margin of the distribution area of a higher syntaxon, form a problem in vegetation classification, because true character species are lacking. We propose a new approach for the classification of such marginal associations, making use of the notion of 'chorological tension zones'. In the absence of true character species, the species from other syntaxa of the same formation can be used as such. Our proposal is to use the species group from every formation-true class only once within every marginal alliance, to limit the number of possible marginal associations. This approach is illustrated in a classification of the retamoid thickets in the Netherlands. On the basis of a numerical-subjective classification of the relevant species in the scrub layer and the evaluation of relevant literature, we conclude that the broom and gorse thickets in the Netherlands can be assigned to the Cytisetea scopario-striati Rivas-Mart. 1974, which is represented by four associations, each of which is characterised by the species of other scrub classes. The Ulici europaei-Sarothamnion scoparii Doing ex Weber 1997 is represented by the Rubo plicati-Sarothamnetum scoparii Weber 1987 and the Crataego monogynae-Cytisetum scoparii R. Haveman, I. de Ronde & J.H.J. Schaminée ass. nov., the Ulici europaei-Cytision striati Rivas-Mart., Báscones, Díaz, Fern. Gonz. & Loidi 1991 by the Frangulo alni-Ulicetum europaei De Foucault 1988 and the Rubo ulmifolii-Ulicetum europaei J.-M. Géhu ex R. Haveman, I. de Ronde & J.H.J. Schaminée ass. nov. This classification is based on a restricted dataset though, and a revision, based on a larger dataset from a wider region has to prove the tenability of the classification.
Extensively managed pastures harbour rare and endangered species and have a decisive role in maintaining grassland biodiversity. Traditional herding of local robust cattle breeds is considered as a feasible tool for preserving these habitats. We studied the scale-dependent effects of grazing on the species richness and composition of three dry grassland types in the Great Hungarian Plain: Achilleo setaceae-Festucetum pseudovinae and Artemisio santonici-Festucetum pseudovinae alkaline grasslands, and Potentillo arenariae-Festucetum pseudovinae sand grassland. We asked the following questions: (1) Does extensive grazing have a scale-dependent effect on plant species richness of alkaline and sand grasslands? (2) How does grazing affect the proportion of specialists, generalists and weeds in the three grassland types? We sampled ten sites of each grassland type, including five extensively grazed and five non-grazed sites (altogether we had 30 sites). We used a series of nested plots each consisting of 10 plots from the size of 0.01 m² to 16 m². We revealed that grazing has contrasting effects in the three grassland types, and had a considerable effect on their species richness even at small scales. In both alkaline grassland types, total species richness was overall higher in grazed plots but it increased in a similar manner for both ungrazed and grazed habitats across plot sizes. Small-scale heterogeneity likely due to the uneven distribution of grazing, trampling and defecation together with mitigated rate of competition allowed more species to co-exist even at small scales in grazed alkaline grasslands. Grazing increased the richness of specialists, but likely due to the salt stress, establishment of weeds was hampered. Open gaps formed by trampling likely supported the establishment of several specialist species such as Plantago tenuiflora and Puccinellia limosa which are typical to open alkali grasslands. Contrary, in sand grasslands, we did not detect any effect of grazing on total species richness, likely due to the adverse effect of grazing on the species richness of specialists and weeds. In contrast with the former findings we detected significantly higher species richness in 0.01 m² and 0.0625 m² plots in the grazed sand grasslands, but found no differences at larger scales. Whilst species richness of specialists was significantly decreased, richness of weeds was increased by grazing. Decrease in the specialist species richness was likely due to the lack of their evolutionary adaptation to grazing. Degradation caused by grazing and trampling together with the propagule pressure from the neighbouring anthropogenic habitats resulted in an increased richness of weeds in the grazed sites.
The vast majority of European grasslands strongly depend on the regular removal of aboveground biomass by agricultural land use, mostly grazing or mowing or a combination of both. These specific management schemes have strong influence on plant diversity and vegetation composition, depending on their particular characteristics and their intensity. For example, the presence or absence of fertilization will favour some species over others, changing plant communities accordingly. Additionally, the farmer’s choice of a specific management scheme will also depend on the abiotic site conditions. This leads to a complex set of associated factors potentially affecting the structure and diversity of grasslands.
In this study, we compiled a unique dataset of 169 differently managed grasslands (in total 202 plots), which were sampled in five regions across Germany. For each plot, we documented management characteristics, measured plant diversity and functional group composition, recorded endangered species according to red lists, and calculated Ellenberg indicator values. We assessed patterns in vegetation composition and diversity in relation to the particular management scheme, which was categorized as meadow, meadow with autumn or winter grazing (with mowing as predominant management), mown pasture (where mowing and grazing are used at roughly equal intensity), seasonal pasture (with grazing as predominant management) and year-round pasture.
Our study showed that grasslands of different management schemes significantly differed in diversity, structure and functional composition. However, it also became obvious that vegetation composition was not strictly distinguished by management alone. Local and regional characteristics such as soil conditions, size of the grassland species pool or land-use history, often played a more prominent role than land use alone. Assumingly, the interplay of those local and regional characteristics with the proportion of grazing and mowing at a particular site inhibit clear differences among our predefined management schemes. Nevertheless, species richness was the lowest in year-round pastures, moderate in meadows and highest in seasonal pastures. In contrast, year-round pastures harboured the highest mean numbers of endangered species. The dependency of a certain management scheme on site-specific environmental factors such as soil fertility, further complicated the clear separation of management effects from those of the environmental background. In summary, modern grassland management strongly shaped grassland vegetation, but today’s combination of different management practices complicated the assessment of specific land-use effects on plant diversity. Thus, neither mowing nor grazing turned out to be “the one and only” management for nature conservation. Although our results challenge long-term prognoses for future vegetation development under modern grassland management, we clearly showed that low-intensity management and the absence of fertilization promoted plant diversity, with higher values in pastures compared to meadows and mown pastures.
Die in Amerika heimische Kolumbianische Zwergwasserlinse (Wolffia columbiana) tritt neuerdings in Europa als Neophyt auf und konnte in Niedersachsen zum ersten Mal im Jahr 2016 nachgewiesen werden. Im Hintergrund stehen die für den Naturschutz relevanten Fragen, wie viele vermeintliche Vorkommen von Wolffia arrhiza in Wirklichkeit Wolffia columbiana repräsentieren und ob dieser Neophyt die heimische und gefährdete Art Wolffia arrhiza verdrängen kann.
Die Floristisch-soziologische Arbeitsgemeinschaft wurde am 13. August 1927 in Göttingen gegründet und besteht nun, mit einer Unterbrechung zwischen 1941 und 1948, seit 90 Jahren. In diesem Rückblick wird vor allem die Entwicklung nach dem 2. Weltkrieg näher dargestellt. Hauptkapitel sind Verein, Satzung und Vorstände, Mitgliederentwicklung, Jahrestagungen, Arbeitskurse und Workshops, die Publikation der Mitteilungen und von Tuexenia mit ihren Beiheften sowie der Synopsis der Pflanzengesellschaften Deutschlands. Insgesamt wird eine sehr erfolgreiche Entwicklung mit Konstanz wesentlicher, schon zu Beginn formulierter Ziele und dynamischen Anpassungen an neue Gegebenheiten festgestellt.
GrassVeg.DE – die neue kollaborative Vegetationsdatenbank für alle Offenlandhabitate Deutschlands
(2017)
Der Bericht stellt die neue kollaborative Vegetationsdatenbank GrassVeg.DE (EU-DE-020; http://bit.ly/2qgX208) vor, die Vegetationsaufnahmen von Grasländern und anderen nicht-aquatischen Offenlandhabitaten Deutschlands sammelt, um sie national und international für die vegetationsökologische Forschung zur Verfügung zu stellen. GrassVeg.DE trägt die Daten zum European Vegetation Archive (EVA) und künftig auch zur globalen Vegetationsdatenbank „sPlot“ bei. Datenlieferanten von GrassVeg.DE behalten volle Verfügungsgewalt über ihre Daten und werden Mitglied des GrassVeg.DE-Konsortiums. Dadurch profitieren sie durch Co-Autorenschaften und Zitate von ihren Beiträgen und erlangen zugleich die Möglichkeit, selbst Projekte zu beantragen, die GrassVeg.DE- oder EVA-Daten nutzen. Die schnell wachsende GrassVeg.DE-Datenbank umfasste im Juli 2017 3.181 Vegetationsaufnahmen aus acht deutschen Bundesländern. Perspektivisch kann GrassVeg.DE dazu beitragen, eine konsistente Neuklassifikation der Graslandvegetationstypen Deutschlands im Rahmen der Synopsis der Pflanzengesellschaften Deutschlands zu ermöglichen. Wir schließen den Beitrag mit einem Aufruf, eigene und aus der Literatur digitalisierte Vegetationsaufnahmen zu GrassVeg.DE beizutragen.
Seit 12 Jahren werden von Mitgliedern der Eurasian Dry Grassland Group (EDGG) und deren Vorgängerorganisationen Grasland-Sonderteile in Tuexenia herausgegeben. Der diesjährige Sonderteil enthält fünf Artikel, die das Grasland verschiedener mitteleuropäischer Länder mit unterschiedlichen Zielen untersuchen. Der erste Artikel untersucht Auswirkungen von Weide und Mahd auf die Diversität des Graslands in Deutschland in Abhängigkeit von verschiedenen Umweltfaktoren, der zweite die Auswirkung kleiner Büsche auf den Artenreichtum von Gefäßpflanzen in beweideten Wiesensteppen in Ungarn. Der dritte Artikel fragt, ob sich ungarische Sandtrockenrasen mit Festuca vaginata von solchen mit F. pseudovaginata in ihrer Vegetation und ihren Standortsbedingungen unterscheiden; die letztere war erst kürzlich beschrieben worden. Der vierte Artikel modelliert Auswirkungen des Klimawandels auf geschützte Graslandbestände in Serbien und deren Arten während schließlich der fünfte Artikel die Initiative einer neuen Datenbank des deutschen Graslands (GrassVeg.DE) vorstellt und dazu aufruft, sich daran zu beteiligen. Insgesamt haben zu diesem 12. Grasland-Sonderteil 41 Autoren aus fünf Ländern (Dänemark, Deutschland, Italien, Schweiz, Serbien und Ungarn) beigetragen.
Ants were shown to be significant pollinators of two orchid species in the alpine zone of the Alps. Repeated observations from several localities confirm the ant Formica lemani as pollinator of Chamorchis alpina whereas Formica exsecta is reported here for the first time as pollinator of Dactylorhiza viridis. These findings appear of great interest, as significant ant pollination of orchids is unknown so far from any other region or habitat type in the Holarctic. This raises the question if there are specific adaptations. The observations do not provide suggestions to adaptations of the Formica ants for pollinating orchids – they simply followed their normal foraging behavior shown in any type of habitat. Yet, special adaptations are given by the two orchid species in developing pollination mechanisms more strongly involving ground-moving insects which are not inactivated by increased wind velocity and lower temperatures in the alpine zone. These are mainly beetles and ants. The pollination mechanisms and interactions with ants of both orchid species are described. Dactylorhiza viridis is outstanding among orchids in needing 20 to 30 minutes for the 90-degree forward bending of the pollinium after attachment to the insect’s forehead whereas the same process takes place between 15 seconds and 3 to 5 minutes in other orchids. Forward bending of pollinia is required for precise placement of the pollen at the stigmatic surface of another flower. The very long bending time is an adaptation to the longer presence time of ground-moving insects at the same plant and aims to reduce the frequency of geitonogamy (self-fertilization). The high frequency of ant pollination in these orchids is a consequence of the high activity density of aggressive, predatory worker ants leading to a displacement of other pollinators. Attempts of ants to remove the fresh, strongly adhesive pollinia from their foreheads failed and a single ant head could carry up to eight pollinia.
Intense direct and indirect human pressure has been imposed on grasslands throughout their range. Mostly due to the constant need for more food production or due to changes in environmental conditions, grasslands as habitats are expected to become highly endangered. The aim of this study was to estimate the grasslands’ ecological response to future climate and environmental changes. The study took place in three ecologically different grassland communities in three protected natural areas of Serbia (Southeastern Europe), following the same methodology. The study sites were: 1) Peštersko polje Special Nature Reserve (SNR), 2) Deliblato sands SNR (its southern part: Labudovo okno) and 3) Zasavica SNR.
Climate change was simulated for mean temperatures and precipitations using the Eta Belgrade University-Princeton Ocean Model (EBU-POM) climate model, for the A1B Intergovernmental Panel on Climate Change (IPCC) emission scenario covering the 1951–2100 period and insolation and volumetric soil moisture content for the 1979–2100 period. Grassland vegetation was analysed at all three sites. One representative plant community per site was selected for further analysis and simulation of ecological changes. One plot was positioned inside each of the above-mentioned communities, all vascular plant species inside the plot were recorded, and soil samples were taken. Ecological Optima (EO) for moisture and temperature were calculated from modified Ellenberg’s plant indicator values of recorded species. The plants’ response to climate and environmental changes was simulated using the VSD+ model for the 2010–2100 period. The data obtained from the model were further analysed with Canonical Correspondence Analysis (CCA).
Overall results show that the temperature rise, along with the irregular precipitation at all three sites, will lead to a drop of the relative abundance of many native species in the period between 2040 and 2060. The low obtained Habitat Suitability Index for the future means that there will be either unfavourable environmental conditions for the development of grasslands, or the species we analysed were untypical. Cosmopolitans and xerothermic species will be more accustomed to the new conditions. Grasses will be the most resilient functional group according to our study. It may be concluded that the functional group of grasses will also play the leading role in future
grasslands at the studied sites.
Central European temperate forests are – with the exception of floodplain forests – relatively little invaded by alien plants. However, despite substantial recent progress, there is still a lack of using vege-tation plot data for analyzing spatio-temporal patterns of alien tree species invasions.
We calculated relevé-based metrics of tree species’ ecological preferences using 19,413 phytosociological forest relevés of the Austrian vegetation database. We focused on the five most widely distributed alien trees, i.e. two archaeophytes (Castanea sativa, Juglans regia) and three neophytes (Acer negundo, Ailanthus altissima, Robinia pseudoacacia). For each of these species we analyzed the mean cover in the tree layer and the occurrence in the herb and shrub layers in relevés colonized by adult trees as a measure for persistence. Further, we evaluated the intergenerational ecological plasticity (= the ability of young trees to grow under different site conditions than adults) for the tree species, and the mean relevé indicator values for light, nutrients, moisture and hemeroby. We then compared these alien and native tree species metrics.
We found that A. altissima and R. pseudoacacia build up high mean cover values in invaded forests, but this was not the case for the other alien trees. Thus, both species strongly affected forest communities of invaded sites. Similarly, the two species were common in the lower vegetation layers indicating recruitment under the canopy of adult conspecifics; this was facilitated by their ability to produce root suckers. Highest values of inter-generational ecological plasticity occurred in native pioneer trees and species of softwood floodplain forests, while alien trees had moderately high (A. negundo, A. altissima, J. regia) to low values (C. sativa, R. pseudoacacia). With the exception of C. sativa, all alien species showed high mean Ellenberg indicator values for light and nutrients, and were more common in sites with high hemeroby and high mean Ellenberg indicator values for temperature. Distinct from the ecological preferences of alien trees, and thus rarely invaded, were montane beech forests, coniferous mountain forests and forests at extremely dry sites, as well as swamp and bog forests dominated by willows and ash.
We conclude that relevé-based metrics of the behavior of alien tree species allow new insights into the spatio-temporal dynamics of invasion of woody species in forests. Future work should expand this approach, e.g., by considering the role of life history traits and actual site conditions.
The flora in the Caucasus Ecoregion is rich in economically important plants. While its value in terms of food crops and medicinal plants has recently been subject to scientific research, the ornamental value of many Caucasian plant species has not yet been fully recognized. In order to assess the ornamental value of the Caucasian flora, vegetation data from two mountainous study regions in Georgia (n = 958 species, mostly grassland vegetation) was compared with the product range of ornamental plants in Germany using an online plant shopping guide. Characterization of the 150 plant species listed in both databases revealed that 121 species are present in central Europe and 117 species are natives or archaeophytes in Germany. Thus, only few species are Caucasian endemics. Furthermore, a list of 79 potential ornamentals endemic to the Caucasus was compiled from the literature. In order to place them in context of the horticultural market, the species characteristics were examined. Following this, a critical discussion of the potentials and risks arising from trade with ornamental plants was carried out with regard to nature conservation, biological invasion control, genetic resource maintenance and socioeconomic significance.
Der Zwerg-Rohrkolben (Typha minima Funck ex Hoppe) ist eine charakteristische Pionierpflanze von alpinen Wildflusslandschaften. Seit den siebziger Jahren ist diese Kennart jedoch in Deutschland vollständig und in Österreich nahezu ausgestorben. Die anhaltenden Populationsrückgänge der Art sind wahrscheinlich das Ergebnis der weitverbreiteten Flussregulierung und des Kraftwerksbaus in Kombination mit den sehr speziellen Standortsansprüchen der Art. Dank den Anstrengungen von Wiederansiedlungsprogrammen befindet sich T. minima wieder an der Oberen Drau in Österreich. In dieser Publikation wird über die Keimung, das Wachstum, die Reproduktion und die Umweltpräferenzen von T. minima berichtet.
Die Keimungsexperimente von 2014 zeigten eine sehr niedrige mittlere Keimungsrate von 15,6% bei einem Schwankungsbereich von 0–90 %. Die Keimungsraten stiegen mit höheren Temperaturen, erhöhter Saatgutreife und kürzeren Saatgutlagerungszeiten. Nach der Saatgutlagerung von 480 Stunden wurde keine Keimung mehr beobachtet.
Beim FFH-Monitoring 2014 an der Oberen Drau wurden Zwerg-Rohrkolben-Keimlinge (Höhe < 5 cm) generell nur selten gefunden. Die vegetative Jungphase (Höhe > 15 cm, ausschließlich sterile Triebe) wies zumeist den höchsten Flächenanteil im Mittel von 62% auf. Typha minima bildete bis zu einem Alter von ca. 3 Jahren ausschließlich sterile Triebe aus. Ab einem Alter von ca. 9 Jahren wurden auch fertile Triebe mit Blütenständen ausgebildet, wobei deren Anzahl mit zunehmendem Alter sich tendenziell erhöhte. Die Analyse der Standortsfaktoren zeigte, dass T. minima auf eine hohe Bodenfeuchte im Mittel von 39 Vol-% angewiesen ist. Darüber hinaus war der Faktor Beschattung entscheidend. Erst ab einem Beschattungsgrad von 50% durch Weidengebüsche war eine Abnahme der Triebdichte von T. minima zu verzeichnen. Wir schließen daraus, dass T. minima-Populationen während der Keimungsphase extrem empfindlich sind und dass massive Habitatverluste überwiegend das Ergebnis der Flussregulation und der reduzierten Morphodynamik sind, die normalerweise geeignete offene Siedlungsräume für die Keimung des Zwerg-Rohrkolbens schaffen würde.
The view that tumors consist of a homogenous mass of clonal derived cells has dramatically changed in recent years. Tumors harbor an enormous heterogeneity of cells with distinct capabilities and functions. The heterogeneity originates from a differentiation hierarchy of tumor cells, similar to normal tissue organization of stem-cell driven organs, but also from clonal succession of subpopulations by randomly acquired genetic mutations and epigenetic changes. Both scenarios are certainly not mutually exclusive, and also stem and progenitor cells underlie mutational selection. Intratumoral heterogeneity is a major challenge for cancer treatment and disease monitoring. Functional studies revealed that not all tumor cells have the same ability to initiate tumor growth upon transplantation in receptive animal models. The tumorinitiating cells (TICs) were called cancer stem cells due to their similarities to normal tissue stem cells in their molecular and functional properties. They can renew themselves long-term and give rise to tumor cells lacking cancer stem cell properties. However, it is worth stressing here that TICs do not necessarily originate from stem cells, but may have regained stem cell properties. TICs caught major attention since they may provide important steps in the progression of malignant diseases, such as epithelial-to-mesenchymal transition, dissemination, long-term persistence, therapy resistance, and relapse of the disease. The prospective identification of TICs using distinct surface markers would allow their molecular and functional characterization, the design of detection methods for diagnosis and prognosis, and the development of targeted therapies against these detrimental cells. While functional evidence for the existence of TICs were provided for many tumor entities, their marker profile still remains largely undefined and controversial. ...
Purpose: To evaluate long-term outcome of three years and treatment patterns of patients suffering from severely drug-refractory epilepsy (SDRE).
Methods: This analysis was population-based and retrospective, with data collected from four million individuals insured by statutory German health insurance. ICD-10 codes for epilepsy (G40*) and intake of anticonvulsants were used to identify prevalent cases, which were then compared with a matched cohort drawn from the population at large. Insurance data were available from 2008 to 2013. Any patient who had been prescribed with at least four different antiepileptic drugs (AEDs) in an 18-month period was defined as an SDRE case.
Results: A total of 769 patients with SDRE were identified. Of these, 19% were children and adolescents; the overall mean age was 42.3 years, 45.4% were female and 54.6% male. An average of 2.7 AEDs per patient was prescribed during the first follow-up year. The AEDs most commonly prescribed were: levetiracetam (53.5%), lamotrigine (41.4%), valproate (41.3%), lacosamide (20.4%), and topiramate (17.8%). During 3-year follow-up, there was an annual rate of hospitalization in the range 42.7 to 55%, which was significantly higher than the 11.6–12.8% (p < 0.001) for the matched controls. Admissions to hospital because of epilepsy ranged between 1.7 and 1.9 per year, with an average duration for each epilepsy-caused hospitalization of 10–11.1 days. The number of comorbidities for SDRE patients was significantly increased compared with the matched controls: depression (28% against 10%), vascular disorders (22% against 5%), and injury rates were also higher (head 16% against 3%, trunk and limbs 16% against 8%). The 3-year mortality rate for SDRE patients was 14% against 2.1% in the matched cohort.
Conclusion: SDRE patients are treated with AED polytherapy for all of the 3-year follow-up period. They are hospitalized more frequently than the general population and show increased morbidity levels and a sevenfold increase in mortality rate over 3 years. Further examination is required of ways in which new approaches to treatment could lead to better outcomes in severely affected patients.
Background: CML presenting with a variant Philadelphia translocation, atypical BCR-ABL transcript, additional chromosomal aberrations, and evolving MDS is uncommon and therapeutically challenging. The prognostic significance of these genetic findings is uncertain, even as singular aberrations, with nearly no data on management and outcome when they coexist. MDS evolving during the course of CML may be either treatment-associated or an independently coexisting disease, and is generally considered to have an inferior prognosis. Tyrosine kinase inhibitors (TKI) directed against BCR-ABL are the mainstay of treatment for CML, whereas treatment modalities that may be utilized for MDS and CML include allogeneic stem cell transplant and – at least conceptually – hypomethylating agents.
Case report: Here, we describe the clinical course of such a patient, demonstrating that long-term combined treatment with dasatinib and azacitidine for coexisting CML and MDS is feasible and well tolerated, and may be capable of slowing disease progression. This combination therapy had no deleterious effect on subsequent potentially curative haploidentical bone marrow transplantation.
Conclusions: The different prognostic implications of this unusual case and new therapeutic options in CML are discussed, together with a review of the current literature on CML presenting with different types of genomic aberrations and the coincident development of MDS. Additionally, this case gives an example of long-term combined treatment of tyrosine kinase inhibitors and hypomethylating agents, which could be pioneering in CML treatment.
Cellular attachment plays a vital role in the differentiation of pheochromocytoma (PC12) cells. PC12 cells are noradrenergic clonal cells isolated from the adrenal medulla of Rattus norvegicus and studied extensively as they have the ability to differentiate into sympathetic neuron-like cells. The effect of several experimental parameters including (i) the concentration of nerve growth factor (NGF); (ii) substratum coatings, such as poly-L-lysine (PLL), fibronectin (Fn), and laminin (Lam); and (iii) double coatings composed of PLL/Lam and PLL/Fn on the differentiation process of PC12 cells were studied. Cell morphology was visualised using brightfield phase contrast microscopy, cellular metabolism and proliferation were quantified using a 3-(4,5-dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H-tetrazolium (MTS) assay, and the neurite outgrowth and axonal generation of the PC12 cells were evaluated using wide field fluorescence microscopy. It was found that double coatings of PLL/Lam and PLL/Fn supported robust adhesion and a two-fold enhanced neurite outgrowth of PC12 cells when treated with 100 ng/mL of NGF while exhibiting stable metabolic activity, leading to the accelerated generation of axons.
We present a dataset of free-viewing eye-movement recordings that contains more than 2.7 million fixation locations from 949 observers on more than 1000 images from different categories. This dataset aggregates and harmonizes data from 23 different studies conducted at the Institute of Cognitive Science at Osnabrück University and the University Medical Center in Hamburg-Eppendorf. Trained personnel recorded all studies under standard conditions with homogeneous equipment and parameter settings. All studies allowed for free eye-movements, and differed in the age range of participants (~7–80 years), stimulus sizes, stimulus modifications (phase scrambled, spatial filtering, mirrored), and stimuli categories (natural and urban scenes, web sites, fractal, pink-noise, and ambiguous artistic figures). The size and variability of viewing behavior within this dataset presents a strong opportunity for evaluating and comparing computational models of overt attention, and furthermore, for thoroughly quantifying strategies of viewing behavior. This also makes the dataset a good starting point for investigating whether viewing strategies change in patient groups.
Background: The Aedes (Stegomyia) albopictus subgroup includes 11 cryptic species of which Ae. albopictus is the most widely distributed. Its global expansion associated with a documented vector competence for several emerging arboviruses raise obvious concerns in the recently colonized regions. While several studies have provided important insights regarding medical importance of Ae. albopicus, the investigations of the other sibling species are scarce. In Asia, indigenous populations within the Ae. albopictus subgroup can be found in sympatry. In the present study, we aimed to describe and compare molecular, morphological and bacterial symbionts composition among sympatric individuals from the Ae. albopictus subgroup inhabiting a Vietnamese protected area.
Results: Based on morphological structure of the cibarial armarture, we identified a cryptic species in the forest park at Bù Gia Mập in the south-eastern region of Vietnam. Analysis of nuclear (ITS1-5.8S-ITS2) and mitochondrial (cox1, nad5) markers confirmed the divergence between the cryptic species and Ae. albopictus. Analysis of midgut bacterial microbiota revealed a strong similarity among the two species with a notable difference; contrary to Ae. albopictus, the cryptic species did not harbour any Wolbachia infection.
Conclusions: These results could reflect either a recent invasion of Wolbachia in Ae. albopictus or alternatively a loss of this symbiont in the cryptic species. We argue that neglected species of the Ae. albopictus subgroup are of main importance in order to estimate variation of host-symbionts interactions across evolution.
Ion channel gating is essential for cellular homeostasis and is tightly controlled. In some eukaryotic and most bacterial ligand-gated K+ channels, RCK domains regulate ion fluxes. Until now, a single regulatory mechanism has been proposed for all RCK-regulated channels, involving signal transduction from the RCK domain to the gating area. Here, we present an inactive ADP-bound structure of KtrAB from Vibrio alginolyticus, determined by cryo-electron microscopy, which, combined with EPR spectroscopy and molecular dynamics simulations, uncovers a novel regulatory mechanism for ligand-induced action at a distance. Exchange of activating ATP to inactivating ADP triggers short helical segments in the K+-translocating KtrB dimer to organize into two long helices that penetrate deeply into the regulatory RCK domains, thus connecting nucleotide-binding sites and ion gates. As KtrAB and its homolog TrkAH have been implicated as bacterial pathogenicity factors, the discovery of this functionally relevant inactive conformation may advance structure-guided drug development.
SR proteins function in nuclear pre-mRNA processing, mRNA export, and translation. To investigate their cellular dynamics, we developed a quantitative assay, which detects differences in nucleocytoplasmic shuttling among seven canonical SR protein family members. As expected, SRSF2 and SRSF5 shuttle poorly in HeLa cells but surprisingly display considerable shuttling in pluripotent murine P19 cells. Combining individual-resolution cross-linking and immunoprecipitation (iCLIP) and mass spectrometry, we show that elevated arginine methylation of SRSF5 and lower phosphorylation levels of cobound SRSF2 enhance shuttling of SRSF5 in P19 cells by modulating protein-protein and protein-RNA interactions. Moreover, SRSF5 is bound to pluripotency-specific transcripts such as Lin28a and Pou5f1/Oct4 in the cytoplasm. SRSF5 depletion reduces and overexpression increases their cytoplasmic mRNA levels, suggesting that enhanced mRNA export by SRSF5 is required for the expression of pluripotency factors. Remarkably, neural differentiation of P19 cells leads to dramatically reduced SRSF5 shuttling. Our findings indicate that posttranslational modification of SR proteins underlies the regulation of their mRNA export activities and distinguishes pluripotent from differentiated cells.
Recently the Universal Linear Accelerator (UNILAC) serves as a powerful high duty factor (25%) heavy ion beam accelerator for the ambitious experiment program at GSI. Beam time availability for SHE (Super Heavy Element)-research will be decreased due to the limitation of the UNILAC providing Uranium beams with an extremely high peak current for FAIR simultaneously. To keep the GSI-SHE program competitive on a high level and even beyond, a standalone superconducting continuous wave (100% duty factor) LINAC in combination with the upgraded GSI High Charge State injector is envisaged. In preparation for this, the first LINAC section (financed by HIM and GSI) will be tested with beam in 2017, demonstrating the future experimental capabilities. Further on the construction of an extended cryo module comprising two shorter Crossbar-H cavities is foreseen to test until end of 2017. As a final R&D step towards an entire LINAC three advanced cryo modules, each comprising two CH cavities, should be built until 2019, serving for first user experiments at the Coulomb barrier.
Die aus Amerika stammende, neophytische Kolumbianische Zwergwasserlinse Wolffia columbiana wurde in Europa erstmals im Jahr 2013 in Deutschland und den Niederlanden nachgewiesen. Daraufhin wurden weitere 11 Freilandvorkommen von Wolffia aus Deutschland (Nordrhein-Westfalen, Hessen und Rheinland-Pfalz), den Niederlanden und Polen überprüft. Bei 10 der insgesamt 13 untersuchten Proben handelte es sich um Wolffia columbiana, darunter alle 8 bislang untersuchten Vorkommen aus Deutschland. Lediglich bei 3 Freilandproben aus den Niederlanden und Polen handelte es sich um die einheimische Wolffia arrhiza. Der Neophyt scheint also durchaus weiter verbreitet zu sein als gedacht. Die Unterscheidung beider Arten ist nicht ganz leicht, die Unterscheidungsmerkmale werden vorgestellt. Die Vorkommen von Wolffia in Europa sollten überprüft werden, um zu klären, wie viele Vorkommen von Wolffia arrhiza es überhaupt noch gibt, und bei wie vielen Vorkommen es sich tatsächlich um die neophytische Wolffia columbiana oder andere neophytische Wolffia-Arten handelt.
Im NSG Emsdettener Venn im Kreis Steinfurt/NRW wächst seit mindestens 2011 Frasers Auenhartheu (Triade-num fraseri), eine Art, die an sumpfigen Standorten in Nord-Amerika heimisch ist. Das Vorkommen breitet sich im Emsdettener Venn weiter aus und ist hier offensichtlich bereits eingebürgert. Da es sich wahrscheinlich um die erste Verwilderung der Art in Deutschland handelt, wird Frasers Auenhartheu mit Fotos vorgestellt und das Vorkommen näher beschrieben.
Es wird über Vorkommen des Rauen Straußgrases Agrostis scabra WILLD. (Poaceae) in Essen und in Nordrhein-Westfalen berichtet. Die Art stammt ursprünglich aus Nordamerika und Ostasien. Sie ist im Ruhrgebiet mindestens seit 1992 eingebürgert und besiedelt offene Standorte auf Zechenbrachen und an Talsperren.
Zwei Funde des Arabischen Schneckenklees (Medicago arabica) in Geseke/Kreis Soest und Köln gaben Anlass, weitere Funde aus NRW zusammenzustellen und den Status der Art im Bundesland zu diskutieren. Angaben von Botanikern des 20. Jahrhunderts legen nahe, dass die Art schon damals an Wegrändern, auf Bahngeländen, auf Geländen von Wollspinnereien und in Gärten eingebürgert war. Zwei aktuelle Vorkommen in Köln und Königs-winter werden hier als eingebürgert betrachtet. Funde im Aachener Raum schließen sich an das niederländische Areal an, wo die Art als indigen betrachtet wird, sodass sogar ein Indigenat der Art in Nordrhein-Westfalen nicht auszuschließen ist.
Im Gemeindegebiet von Holzwickede (Kreis Unna, Nordrhein-Westfalen) wachsen derzeit fünf verschiedene Orchideen-Sippen. Die bei weitem Häufigste ist die Breitblättrige Stendelwurz (Epipactis helleborine), von der mehr als 1300 Pflanzen gefunden wurden und die als typische Orchidee des Siedlungsraums bezeichnet werden kann. Das Fuchs' Knabenkraut (Dactylorhiza fuchsii) wächst heute nicht mehr in der Naturlandschaft, sondern nur noch an zwei Orten in Zierrasen in Privatgärten im Siedlungsraum. Das Hybrid-Knabenkraut (Dactylorhiza maculata agg. x majalis) konnte an drei verschiedenen Stellen in Wiesen gefunden werden und ist offenbar konkurrenzkräftiger als ihre Elternarten. Die Vogelnestwurz (Neottia nidus-avis) war bisher im Gebiet noch nicht gefunden worden, bei dem neu entdeckten Wuchsort handelt es sich möglicherweise um eine Neuansiedlung. Ein Erstfund für Nordrhein-Westfalen gelang mit einer Hybride der Schnepfen-Ragwurz (Ophrys scolopax-Hybride), deren mögliche Herkunft diskutiert wird.
Aktuelle Entwicklungen der Verbreitung und Häufigkeit epiphytischer Moose und Flechten im Stadtgebiet Aachen und in angrenzenden Regionen werden vorgestellt. Speziell besprochen werden die folgenden Arten: Lebermoose: Cololejeunea minutissima, Lejeunea ulicina (= Microlejeunea u.), Metzgeria consanguinea (= M. temperata), M. violacea (= M. fruticulosa); Flechten: Diploicia canescens, Normandina pulchella, Melanohalea exasperata (= Melanelia e.), M. laciniatula (= Melanelia l.), Parmotrema pseudoreticulatum (= Rimelia olivaria), P. reticulatum (= Rimelia r.), Physcia clementei.
Über das Vorkommen stabilisierter Zwischenformen zwischen Geranium purpureum und G. robertianum in Aachen wird berichtet. Sie entsprechen im Habitus, in der Pollengröße sowie in der Farbe der Staubbeutel G. purpureum, unterscheiden sich aber in Kronblattfarbe und -maßen, Kelchfarbe und -behaarung sowie der Fruchtoberfläche. Es handelt sich offenbar um durch introgressive Hybridisation von G. robertianum in G. purpureum entstandene Sippen, die als G. urbanum und G. alboroseum neu beschrieben werden. Aufgrund der Pollengröße ist eine (annähernd) diploide Chromosomenzahl zu erwarten. Selten konnten intermediäre Hybriden G. purpureum × G. robertianum und G. urbanum × G. robertianum beobachtet werden, die heterogen große Pollenkörner ausbilden, keine reifen Früchte bilden und vermutlich triploid sind.
Der erste Teil einer Darstellung der Gattung Echinochloa im Stadtgebiet Aachen und nahe gelegenen Gebieten von Belgien, den Niederlanden und der Städteregion Aachen beschäftigt sich mit der E. muricata-Gruppe. In dieser Gruppe wird neben E. muricata s. str. eine weitere Art, E. wiegandii, unterschieden. Sie vermittelt vom Aussehen der Rispen und Ährchen zu E. crus-galli s. l., gehört aber aufgrund charakteristischer Merkmale der fertilen Deck- und Vorspelzen in die E. muricata-Gruppe. Diagnostische Merkmale von E. wiegandii gegenüber E. muricata s. str. sind ein früherer Blühbeginn, schlankere, schwächer bestachelte, dunkler gefärbte Ährchen sowie eine tendenziell längere Begrannung der Ährchen.
Persicaria x condensata, die Hybride zwischen P. maculosa und P. mitis, konnte an einigen Stellen im Stadtgebiet von Aachen sowie in angrenzenden Gebieten der Städteregion Aachen, Belgien und den Niederlanden an gemeinsamen Wuchsorten der Eltern beobachtet werden, insgesamt in etwa vierhundert Pflanzen. Fast alle sind nahezu steril, morphologisch einheitlich und dürften Primärhybriden sein. Sie vermitteln habituell und in den Merk-malen zwischen den Eltern. Auffallend sind neben der weitgehenden Sterilität die weißen bis hell rosa gefärbten Blütenstände. An einem Fundort in Deutschland konnten deutlich stärker fertile Rückkreuzungen von P. x condensata mit P. maculosa nachgewiesen werden. Sie ähneln P. maculosa. Die Entstehung mehrerer abweichender, recht einheitlicher, wenig fertiler Pflanzen von P. x condensata, die P. mitis stärker ähneln, ist ungeklärt. Sie wuchsen an zwei Stellen in den Niederlanden. An zwei Wuchsorten in Belgien und den Niederlanden konnten sechs Pflanzen von Persicaria x subglandulosa, der Hybride zwischen P. hydropiper und P. minor, und 13 Pflanzen von P. x wilmsii, der Hybride zwischen P. minor und P. mitis, beobachtet werden. P. x subglandulosa bildete keine reifen Früchte und zeigte ebenfalls weißliche Blütenstände. Die Pflanzen vermitteln zwischen den Eltern, ähneln insgesamt eher P. minor, vergrünen im Blütenbereich stärker und sind hier deutlich drüsig. P. x wilmsii ist partiell steril, bildet aber mehr gut ausgebildete Früchte als die anderen Hybriden (außer Rückkreuzungen) aus. Auch bei dieser Hybride sind die Blütenstände weißlich. Sie bildet zwischen den Eltern ansonsten vermittelnde Merkmale aus. Dies betrifft den Habitus sowie die Blüten, Früchte und Blätter. Andere Hybriden zwischen Persicaria hydropiper, P. maculosa, P. minor und P. mitis konnten nicht nachgewiesen werden. Das herausragende Merkmal der beobachteten Hybriden, das auch auf weitere fast sterile Persicaria-Hybriden zutreffen dürfte, sind auffallend helle Blütenstände, die eine einfache Identifizierung von Hybridpflanzen innerhalb von Persicaria-Populationen erlauben.
Hier werden bemerkenswerte floristische Funde aus Nordrhein-Westfalen aus dem Jahr 2016 und einige Nachträge aus 2015 zusammengestellt, die aus Sicht der Schriftleitung von landesweiter Bedeutung sind. Die Funde werden im Laufe des Jahres zunächst chronologisch auf die Homepage des Bochumer Botanischen Vereins gestellt und am Ende des Jahres zu einem Artikel zusammengefasst. Bei der Auswahl der Arten für diese Liste ist nicht an Bestätigung bereits lange bekannter Vorkommen gedacht, die an Ort und Stelle durchgehend vorkommen, sondern z. B. an Neufunde seltener Arten, Wiederfunde seltener Arten, die zwischendurch verschwunden schienen (wie z. B. Ackerunkräuter) oder auch an bekannte Vorkommen, die erloschen sind oder kurz vor dem Erlöschen stehen. Außerdem nehmen Beobachtungen von neophytischen Arten einen großen Raum ein, die entweder auf dem Wege der Einbürgerung sind, deren Einbürgerung noch nicht allgemein bekannt bzw. anerkannt ist oder deren Vorkommen bisher erst selten für Nordrhein-Westfalen veröffentlicht wurden. Ein wichtiges Kriterium für aufgeführte Arten ist die Seltenheit im Bundesland oder der betreffenden Großlandschaft bzw. Region. Die Zuordnung der Arten zu Pflanzenfamilien richtet sich nach Parolly & Rohwer 2016.
Im Folgenden werden für das östliche Ruhrgebiet bemerkenswerte Funde aufgeführt. Das Gebiet umfasst die Städte Gelsenkirchen, Essen, Herne, Bochum, Dortmund, Hagen und Hamm sowie die Kreise Recklinghausen, Unna und den Ennepe-Ruhr-Kreis. Zur besseren Auswertung wurden hinter den Fundorten die MTB-Angaben (Topographische Karte 1:25000) angegeben und ggf. eine Bewertung des Fundes für den hiesigen Raum und der floristische Status hinzugefügt. Funde aus dem östlichen Ruhrgebiet, die von nordrhein-westfälischer Bedeutung sind, sind im Beitrag Bochumer Botanischer Verein 2017 aufgeführt. Die Zuordnung der Arten zu Pflanzenfamilien richtet sich nach Parolly & Rohwer 2016.
Size-resolved measurements of atmospheric aerosol and cloud condensation nuclei (CCN) concentrations and hygroscopicity were conducted at the remote Amazon Tall Tower Observatory (ATTO) in the central Amazon Basin over a full seasonal cycle (Mar 2014–Feb 2015). In a companion part 1 paper, we presented an in-depth CCN characterization based on annually as well as seasonally averaged time intervals and discuss different parametrization strategies to represent the Amazonian CCN cycling in modelling studies (M. Pöhlker et al., 2016b). The present part 2 study analyzes the aerosol and CCN variability in original time resolution and, thus, resolves aerosol advection and transformation for the following case studies, which represent the most characteristic states of the Amazonian atmosphere:
1. Near-pristine (NP) conditions, defined as the absence of detectable black carbon (< 0.01 µg m−3), showed their highest occurrence (up to 30 %) in the wet season (i.e., Mar–May). On average, the NP episodes are characterized by a bimodal aerosol size distribution (strong Aitken mode: DAit = 70 nm, NAit = ~ 200 cm−3 vs. weaker accumulation mode: Dacc = 170 nm, Nacc = ~ 60 cm−3), a mostly organic particle composition, and relatively low hygroscopicity levels (κAit = 0.12 vs. κacc = 0.18). The NP CCN efficiency spectrum shows that the CCN population is sensitive to changes in supersaturation (S) over a wide S range.
2. Long-range transport (LRT) conditions frequently mix Saharan dust, African combustion smoke, and sea spray aerosols into the Amazonian wet season atmosphere. The LRT episodes (i.e., Feb–Apr) are characterized by an accumulation mode dominated size distribution (DAit = 80 nm, NAit = 120 cm−3 vs. Dacc = 180 nm, Nacc = 300 cm−3), a clearly increased abundance of dust and salt compounds, and relatively high hygroscopicity levels (κAit = 0.18, κacc = 0.34). The LRT CCN efficiency spectrum shows that the CCN population is highly sensitive to changes in S in the low S regime.
3. Biomass burning (BB) conditions dominate the Amazonian dry season. A selected characteristic BB episode shows a very strong accumulation mode (DAit = 70 nm, NAit = ~ 140 cm−3 vs. Dacc = 170 nm, Nacc = ~ 3400 cm−3), particles with very high organic fractions (> 90 %), and correspondingly low hygroscopicity levels (κAit = 0.14, κacc = 0.17). The BB CCN efficiency spectrum shows that the CCN population is highly sensitive to changes in S in the low S regime.
4. Mixed pollution conditions show the superposition of African (i.e., volcanic) and Amazonian (i.e., biomass burning) aerosol emissions during the dry season. The African aerosols showed a broad monomodal distribution (D = 130 nm, N = ~ 1300 cm−3), with very high sulfate fractions (20 %), and correspondingly high hygroscopicity (κAit = 0.14, κacc = 0.22). This was superimposed by fresh smoke from nearby fires with one strong mode (D = 113 nm, Nacc = ~ 2800 cm−3), an organic-dominated aerosol, and sharply decreased hygroscopicity (κAit = 0.10, κacc = 0.20). These conditions underline the rapidly changing pollution regimes with clear impacts on the aerosol and CCN properties.
Overall, this study provides detailed insights into the CCN cycling in relation to aerosol-cloud interaction in the vulnerable and climate-relevant Amazon region. The detailed analysis of aerosol and CCN key properties and particularly the extracted CCN efficiency spectra with the associated fit parameters provide a basis for an in-depth analysis of aerosol-cloud interaction in the Amazon and beyond.
The physical housing environment is important to facilitate activities of daily living (ADL) for older people. A hindering environment may lead to ADL dependence and thus increase the need for home services, which is individually restricting and a growing societal burden. This study presents simulations of policy changes with regard to housing accessibility that estimates the potential impact specifically on instrumental activities of daily living (I-ADL), usage of home services, and related costs. The models integrate empirical data to test the hypothesis that a policy providing funding to remove the five most severe environmental barriers in the homes of older people who are at risk of developing dependence in I-ADL, can maintain independence and reduce the need for home services. In addition to official statistics from state agencies in Sweden and Germany, we utilized published results from the ENABLE-AGE and other scientific studies to generate the simulations. The simulations predicted that new policies that remove potentially hindering housing features would improve I-ADL performance among older people and reduce the need for home services. Our findings suggest that a policy change can contribute to positive effects with regard to I-ADL independence among older people and to a reduction of societal burden.
We developed a coupled regional climate system model based on the CCLM regional climate model. Within this model system, using OASIS3-MCT as a coupler, CCLM can be coupled to two land surface models (the Community Land Model (CLM) and VEG3D), the NEMO-MED12 regional ocean model for the Mediterranean Sea, two ocean models for the North and Baltic seas (NEMO-NORDIC and TRIMNP+CICE) and the MPI-ESM Earth system model.
We first present the different model components and the unified OASIS3-MCT interface which handles all couplings in a consistent way, minimising the model source code modifications and defining the physical and numerical aspects of the couplings. We also address specific coupling issues like the handling of different domains, multiple usage of the MCT library and exchange of 3-D fields.
We analyse and compare the computational performance of the different couplings based on real-case simulations over Europe. The usage of the LUCIA tool implemented in OASIS3-MCT enables the quantification of the contributions of the coupled components to the overall coupling cost. These individual contributions are (1) cost of the model(s) coupled, (2) direct cost of coupling including horizontal interpolation and communication between the components, (3) load imbalance, (4) cost of different usage of processors by CCLM in coupled and stand-alone mode and (5) residual cost including i.a. CCLM additional computations.
Finally a procedure for finding an optimum processor configuration for each of the couplings was developed considering the time to solution, computing cost and parallel efficiency of the simulation. The optimum configurations are presented for sequential, concurrent and mixed (sequential+concurrent) coupling layouts. The procedure applied can be regarded as independent of the specific coupling layout and coupling details.
We found that the direct cost of coupling, i.e. communications and horizontal interpolation, in OASIS3-MCT remains below 7 % of the CCLM stand-alone cost for all couplings investigated. This is in particular true for the exchange of 450 2-D fields between CCLM and MPI-ESM. We identified remaining limitations in the coupling strategies and discuss possible future improvements of the computational efficiency.
Background: As members of the Notothenioidei - the dominant fish taxon in Antarctic waters - the family Bathydraconidae includes 12 genera and 17 species. The knowledge of these species inhabiting an isolated environment is rather fragmentary, including their parasite fauna. Studies on fish hosts and their associated parasites can help gain insights into even remote ecosystems and be used to infer ecological roles in food webs; however, ecological studies on the Bathydraconidae are scarce.
Results: In this study, stomach contents and parasite fauna of the Antarctic dragonfish species Parachaenichthys charcoti (n = 47 specimens) as well as of Gerlachea australis (n = 5), Gymnodraco acuticeps (n = 9) and Racovitzia glacialis (n = 6) were examined. The parasite fauna of P. charcoti consisted of eight genera represented by 11 species, with three of them being new host records. Overall, 24 parasite genera and 26 species were found in the sampled fish, including eleven new host records.
Conclusion: Analyses revealed that the majority of the parasite species found in the different fish hosts are endemic to Antarctic waters and are characterized by a broad host range. These findings are evidence for the current lack of knowledge and the need for further parasitological studies of fish species in this unique habitat.
Background: Treatment of asthma does not always comply with asthma guidelines (AG). This may be rooted in direct or indirect resistance on the doctors’ and/or patients’ side or be caused by the healthcare system. To assess whether patients’ concepts and attitudes are really an implementation barrier for AG, we analysed the patients’ perspective of a “good asthma therapy” and contrasted their wishes with current recommendations.
Methods: Using a qualitative exploratory design, topic centred focus group (FG) discussions were performed until theoretical saturation was reached. Inclusion criteria were an asthma diagnosis and age above 18. FG sessions were recorded audio-visually and analysed via a mapping technique and content analysis performed according to Mayring (supported by MAXQDA®). Participants’ speech times and the proportion of time devoted to different themes were calculated using the Videograph System® and related to the content analysis.
Results: Thirteen men and 24 women aged between 20 and 77 from rural and urban areas attended five FG. Some patients had been recently diagnosed with asthma, others years previously or in childhood. The following topics were addressed: (a) concern about or rejection of therapy components, particularly corticosteroids, which sometimes resulted in autonomous uncommunicated medication changes, (b) lack of time or money for optimal treatment, (c) insufficient involvement in therapy choices and (d) a desire for greater empowerment, (e) suboptimal communication between healthcare professionals and (f) difficulties with recommendations conflicting with daily life. Primarily, (g) participants wanted more time with doctors to discuss difficulties and (h) all aspects of living with an impairing condition.
Conclusions: We identified some important patient driven barriers to implementing AG recommendations. In order to advance AG implementation and improve asthma treatment, the patients’ perspective needs to be considered before drafting new versions of AG. These issues should be addressed at the planning stage.
Trial registration: DRKS00000562 (German Clinical Trials Registry).
To assess the scope of infection control measures for multidrug-resistant bacteria in high-risk settings, a survey among university hospitals was conducted. Fourteen professionals from 8 sites participated. Reported policies varied largely with respect to the types of wards conducting screening, sample types used for screening and implementation of contact precautions. This variability among sites highlights the need for an evidence-based consensus of current infection control policies.
The yeast bc1 complex (complex III) and cytochrome oxidase (complex IV) are mosaics of core subunits encoded by the mitochondrial genome and additional nuclear-encoded proteins imported from the cytosol. Both complexes build in the mitochondrial inner membrane various supramolecular assemblies. The formation of the individual complexes and their supercomplexes depends on the activity of dedicated assembly factors. We identified a so far uncharacterized mitochondrial protein (open reading frame YDR381C-A) as an important assembly factor for complex III, complex IV, and their supercomplexes. Therefore, we named this protein Cox interacting (Coi) 1. Deletion of COI1 results in decreased respiratory growth, reduced membrane potential, and hampered respiration, as well as slow fermentative growth at low temperature. In addition, coi1Δ cells harbour reduced steady-state levels of subunits of complexes III and IV as well as of the assembled complexes and supercomplexes. Interaction of Coi1 with respiratory chain subunits seems transient, as it appears to be a stoichiometric subunit neither of complex III nor of complex IV. Collectively, this work identifies a novel protein that plays a role in the assembly of the mitochondrial respiratory chain.
The mouse bitter taste receptors Tas2r143, Tas2r135, and Tas2r126 are encoded by genes that cluster on chromosome 6 and have been suggested to be expressed under common regulatory elements. Previous studies indicated that the Tas2r143/Tas2r135/Tas2r126 cluster is expressed in the heart, but other organs had not been systematically analyzed. In order to investigate the expression of this bitter taste receptor gene cluster in non-gustatory tissues, we generated a BAC (bacterial artificial chromosome) based transgenic mouse line, expressing CreERT2 under the control of the Tas2r143 promoter. After crossing this line with a mouse line expressing EGFP after Cre-mediated recombination, we were able to validate the Tas2r143-CreERT2 transgenic mouse line and monitor the expression of Tas2r143. EGFP-positive cells, indicating expression of members of the cluster, were found in about 47% of taste buds, and could also be found in several other organs. A population of EGFP-positive cells was identified in thymic epithelial cells, in the lamina propria of the intestine and in vascular smooth muscle cells of cardiac blood vessels. EGFP-positive cells were also identified in the epithelium of organs readily exposed to pathogens including lower airways, the gastrointestinal tract, urethra, vagina, and cervix. With respect to the function of cells expressing this bitter taste receptor cluster, RNA-seq analysis in EGFP-positive cells isolated from the epithelium of trachea and stomach showed expression of genes related to innate immunity. These data further support the concept that bitter taste receptors serve functions outside the gustatory system.
The mTOR (mechanistic target of rapamycin) inhibitor rapamycin has long been known for its immune suppressive properties, but it has shown limited therapeutic success when given systemically to patients with psoriasis. Recent data have shown that the mTOR pathway is hyperactivated in lesional psoriatic skin, which probably contributes to the disease by interfering with maturation of keratinocytes. This study investigated the effect of topical rapamycin treatment in an imiquimod-induced psoriatic mouse model. The disease was less severe if the mice had received rapamycin treatment. Immunohistological analysis revealed that rapamycin not only prevented the activation of mTOR signalling (P-mTOR and P-S6 levels), but almost normalized the expression of epidermal differentiation markers. In addition, the influx of innate immune cells into the draining lymph nodes was partially reduced by rapamycin treatment. These data emphasize the role of mTOR signalling in the pathogenesis of psoriasis, and support the investigation of topical mTOR inhibition as a novel anti-psoriatic strategy.
Brain-derived neurotrophic factor (BDNF), an important neural growth factor, has gained growing interest in neuroscience, but many influencing physiological and analytical aspects still remain unclear. In this study we assessed the impact of storage time at room temperature, repeated freeze/thaw cycles, and storage at −80 °C up to 6 months on serum and ethylenediaminetetraacetic acid (EDTA)-plasma BDNF. Furthermore, we assessed correlations of serum and plasma BDNF concentrations in two independent sets of samples. Coefficients of variations (CVs) for serum BDNF concentrations were significantly lower than CVs of plasma concentrations (n = 245, p = 0.006). Mean serum and plasma concentrations at all analyzed time points remained within the acceptable change limit of the inter-assay precision as declared by the manufacturer. Serum and plasma BDNF concentrations correlated positively in both sets of samples and at all analyzed time points of the stability assessment (r = 0.455 to rs = 0.596; p < 0.004). In summary, when considering the acceptable change limit, BDNF was stable in serum and in EDTA-plasma up to 6 months. Due to a higher reliability, we suggest favoring serum over EDTA-plasma for future experiments assessing peripheral BDNF concentrations.
Treatment of refractory ascites with an automated low-flow ascites pump in patients with cirrhosis
(2017)
Background: Refractory ascites (RA) is a frequent complication of cirrhosis, requiring large volume paracentesis or placement of a transjugular intrahepatic portosystemic shunt (TIPSS). The automated low-flow ascites pump (alfapump, Sequana Medical AG, Zurich, Switzerland) is an innovative treatment option for patients with RA.
Aim: To assess safety and efficacy of this treatment in patients with a contraindication to TIPSS.
Methods: Fifty-six patients (43 males; mean age 62 years) from centres in Germany, Switzerland, UK and Spain were included and followed for up to 24 months. Complications, device deficiencies, paracentesis frequency and patient survival were recorded.
Results: At the time of this analysis, 3 patients completed the 24-month observation period, monitoring of 3 was ongoing, 9 underwent liver transplantation, 17 patients were withdrawn due to serious adverse events and 23 patients died. Most frequently observed technical complication was blocking of the peritoneal catheter. Twenty-three pump-related reinterventions (17 patients) and 12 pump exchanges (11 patients) were required during follow-up. The pump system was explanted in 48% of patients (in 17 patients due to serious adverse events, in 9 at the time of liver transplantation and in 1 due to recovery from RA). Median frequency of paracentesis dropped from 2.17 to 0.17 per month.
Conclusions: The alfapump can expand therapeutic options for cirrhotic patients with RA. Continuous drainage of ascites in a closed loop automated system led to significant reduction in paracentesis frequency. Technical and procedural improvements are required to reduce the rate of adverse events and reinterventions.
The histopathological and molecular heterogeneity of glioblastomas represents a major obstacle for effective therapies. Glioblastomas do not develop autonomously, but evolve in a unique environment that adapts to the growing tumour mass and contributes to the malignancy of these neoplasms. Here, we show that patient-derived glioblastoma xenografts generated in the mouse brain from organotypic spheroids reproducibly give rise to three different histological phenotypes: (i) a highly invasive phenotype with an apparent normal brain vasculature, (ii) a highly angiogenic phenotype displaying microvascular proliferation and necrosis and (iii) an intermediate phenotype combining features of invasion and vessel abnormalities. These phenotypic differences were visible during early phases of tumour development suggesting an early instructive role of tumour cells on the brain parenchyma. Conversely, we found that tumour-instructed stromal cells differentially influenced tumour cell proliferation and migration in vitro, indicating a reciprocal crosstalk between neoplastic and non-neoplastic cells. We did not detect any transdifferentiation of tumour cells into endothelial cells. Cell type-specific transcriptomic analysis of tumour and endothelial cells revealed a strong phenotype-specific molecular conversion between the two cell types, suggesting co-evolution of tumour and endothelial cells. Integrative bioinformatic analysis confirmed the reciprocal crosstalk between tumour and microenvironment and suggested a key role for TGFβ1 and extracellular matrix proteins as major interaction modules that shape glioblastoma progression. These data provide novel insight into tumour-host interactions and identify novel stroma-specific targets that may play a role in combinatorial treatment strategies against glioblastoma.
In Benin, people have a rich ethnobotanical knowledge of plant species, reflecting the cultural and ecological diversity of their environment. Several studies were focused on the question of how valuable are plant species for local communities. However, there has been very little research interest in the orchid species in spite of the importance of orchids in the livelihood of the local people. This study examined the use and differences in knowledge of local people of orchids in the Sudanian zone of Benin. An ethnobotanical study was conducted amongst the four main socio-economic and ethnic groups from six villages around the Pendjari Biosphere Reserve in Benin. One hundred and sixty people participated in this study. Data were gathered using semi-structured individual interviews and analysed using quantitative ethnobotanical methods. 29 different types of use were recorded and can be grouped into four main use categories: medicinal, veterinary, spiritual and food. There were differences in orchid utilization among the ethnic groups, gender and age. The knowledge of orchid uses was significantly affected by the ethnic group and the age of the respondent. Unlike young educated generations, most adults and elders, especially women, had a more comprehensive knowledge of orchid uses. Calyptrochilum christianum, the most used orchid, was mentioned in more than 50% of the types of orchid use. The Gourmantché and Waama tribe had more knowledge on orchid use whereas the Berba tribe had less knowledge. Three orchid species (Habenaria cirrhata, Eulophia horsfallii and Nervilia bicarinata) were reported as food. Orchids had low use value ranging from 0.01 (Eulophia spp) to 0.2 (C. christianum). The controlled access to the biosphere reserve and rural exodus can explain the lack of indigenous knowledge transfer of orchid use and value from elders to the young generation.
Cette étude analyse les stratégies locales de dénomination des espèces végétales par les Mossé des régions du nord, du centre nord, du centre et du Plateau Central du Burkina Faso et leurs perceptions des plantes. A travers des interviews semi directes auprès de 1437 personnes âgées d’au moins 60 ans et des jeunes de moins de 40 ans des différentes localités, l’étude a pu montrer les critères de dénomination, les conceptions que les populations ont des espèces végétales ainsi que l‘impact de ces connaissances dans la conservation de la phytodiversité. 72 espèces au total ont été décrites. Elles sont réparties en 51 genres et 29 familles. Les familles dominantes sont les Commelinaceae et les Fabaceae-Mimosoideae. Dans la taxonomie locale faite sur les plantes en milieu rural Mossé, 16 critères sont utilisés. Les critères les plus cités par la population sont l’usage fait de la plante (94 %), le mysticisme lié à l’espèce (86 %), l’écologie ou le milieu de vie de l’espèce (83 %), la dualité mâle/femelle (83 %), la couleur des organes ou parties de la plante (81 %), l’origine de la plante (80 %), la morphologie foliaire (76 %), la présence d’organes saillants sur la plante (75 %) et le mode de dissémination des fruits ou des graines (74 %). Les noms botaniques attribués aux plantes varient d’une région à une autre. Les populations ont des perceptions vis-à-vis de nombreuses espèces. Ainsi, les espèces comme Stereospermum kunthianum, Calotropis procera, Ozoroa insignis, Faidherbia albida, Maytenus senegalensis et Biophytum umbraculum sont frappées de mysticisme. Elles sont toutes craintes par les populations et sont dans certaines localités à l’abri d’exploitations multiformes humaines. Cela contribue à une meilleure conservation de la biodiversité.
La connaissance du potentiel et de la productivité d'une ressource est une donnée nécessaire à l'élaboration d'une bonne politique de sa gestion. La structure et la productivité des peuplements à Acacia seyal Del. et à Acacia senegal (L) Willd.ont été étudiées dans les formations naturelles de Massenya au Tchad. Sur la base de 32 placeaux de 900 m2 , le diamètre et la hauteur de tous les individus d’espèces ligneuses ont été mesurés. Pour des espèces adultes à port arbustif, le diamètre est mesuré à 50 cm du sol. Les individus juvéniles sont simplement comptés et rangés en classe de hauteur. L’étude de la structure des peuplements et de deux espèces d’Acacia a été réalisée à travers le nombre de tiges à l’hectare et les classes de diamètre. L’Indice de Valeur d’Importance (IVI) a été utilisée pour apprécier la prédominance des espèces sur le site. La productivité des peuplements en gomme a été évaluée en fonction de la production moyenne d’un arbre qui était de 250 g. Les peuplements à Acacia de Massenya sont très denses (619 ± 269 tiges/ha), mais à surface terrière faible (7,10 ± 1,20 m²/ ha) due à un grand nombre d’individus de petit diamètre (11,1 ± 2,2 cm). Ce sont des peuplements généralement arbustif (hauteur de 5,2 ± 0,9 m) avec un bon potentiel de juvéniles (408 ± 267 tiges/ha) pouvant se régénérer naturellement. Toutefois, Acacia seyal semble plus apte à coloniser d’autres milieux qu’Acacia senegal. Sur les sept espèces qui prédominent sur le site, Acacia seyal et Acacia senegal réalisent des IVI plus élevés (respectivement 79 et 54). Les espèces à bon potentiel de régénération sont Acacia seyal (65 ± 8 juv./ha), Acacia senegal (58 ± 10 juv./ha) et Guiera senegalensis (51 ± 8 juv./ha). La production annuelle de gomme est estimée à 56 ± 6 kg/ha de gomme friable (à Acacia seyal) et 41 ± 5 kg/ha de gomme dure (à A. senegal).
Most cellular stresses induce protein translation inhibition and stress granule formation. Here, using Drosophila S2 cells, we investigate the role of G3BP/Rasputin in this process. In contrast to arsenite treatment, where dephosphorylated Ser142 Rasputin is recruited to stress granules, we find that, upon amino acid starvation, only the phosphorylated Ser142 form is recruited. Furthermore, we identify Sec16, a component of the endoplasmic reticulum exit site, as a Rasputin interactor and stabilizer. Sec16 depletion results in Rasputin degradation and inhibition of stress granule formation. However, in the absence of Sec16, pharmacological stabilization of Rasputin is not enough to rescue the assembly of stress granules. This is because Sec16 specifically interacts with phosphorylated Ser142 Rasputin, the form required for stress granule formation upon amino acid starvation. Taken together, these results demonstrate that stress granule formation is fine-tuned by specific signaling cues that are unique to each stress. These results also expand the role of Sec16 as a stress response protein.
Self-extracellular RNA (eRNA), released from stressed or injured cells upon various pathological situations such as ischemia-reperfusion-injury, has been shown to act as an alarmin by inducing procoagulatory and proinflammatory responses. In particular, M1-polarization of macrophages by eRNA resulted in the expression and release of a variety of cytokines, including tumor necrosis factor (TNF)-α or interleukin-6 (IL-6). The present study now investigates in which way self-eRNA may influence the response of macrophages towards various Toll-like receptor (TLR)-agonists. Isolated agonists of TLR2 (Pam2CSK4), TLR3 (PolyIC), TLR4 (LPS), or TLR7 (R848) induced the release of TNF-α in a concentration-dependent manner in murine macrophages, differentiated from bone marrow-derived stem cells by mouse colony stimulating factor. Here, the presence of eRNA shifted the dose-response curve for Pam2CSK4 (Pam) considerably to the left, indicating that eRNA synergistically enhanced the cytokine liberation from macrophages even at very low Pam-levels. The synergistic activation of TLR2 by eRNA/Pam was duplicated by other TLR2-agonists such as FSL-1 or Pam3CSK4. In contrast, for TLR4-agonists such as LPS a synergistic effect of eRNA was much weaker, and was not existent for TLR3-, or TLR7-agonists. The synergistic eRNA/Pam action was dependent on the NFκB-signaling pathway as well as on p38MAP- and MEK1/ERK-kinases and was prevented by predigestion of eRNA with RNase1 or by antibodies against TLR2. Thus, the presence of self-eRNA as alarming molecule sensitizes innate immune responses towards pathogen-associated molecular patterns (PAMPs) in a synergistic way and may thereby contribute to the differentiated outcome of inflammatory responses.