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Twenty eight species of Temnocerus Thunberg, 1815 are recognized from Central America (Mexico to Panama) with eight previously described species and 20 new species as follows: T. abdominalis (Voss), T. chiapensis n. sp., T. chiriquensis (Sharp), T. confertus (Sharp), T. cyaneus n. sp., T. ellus n. sp., T. giganteus n. sp., T. guatemalenus (Sharp), T. guerrerensis n. sp., T. herediensis n. sp., T. mexicanus n. sp., T. michoacensis n. sp., T. minutus n. sp., T. niger n. sp., T. oaxacensis n. sp., T. obrieni, n. sp., T. oculatus (Sharp), T. potosi n. sp., T. pseudaeratus n. sp., T. pueblensis n. sp., T. pusillus (Sharp), T. regularis (Sharp), T. rostralis n. sp., T. rugosus n. sp., T. salvensis n. sp., T. tamaulipensis n. sp., T. thesaurus (Sharp) and T. yucatensis n. sp. Rhynchites debilis Sharp is placed in synonymy with Temnocerus guatemalenus (Sharp) and Pselaphorhynchites lindae Hamilton is placed in synonymy with Temnocerus regularis (Sharp). A key to species based on external characters and male genitalia is provided as well as digital images, aedeagus drawings, and map distributions.
Five new species of Orizabus Fairmaire from Mexico and Guatemala are described, illustrated, and compared with other Orizabus species: O. amalgamatus Ratcliffe and Cave, O. delgadoi Ratcliffe and Cave, O. epithecus Ratcliffe and Cave, O. mezclus Ratcliffe and Cave, and O. thomasi Ratcliffe and Cave. An identification key and a checklist of the species in the genus Orizabus are provided.
Three new species of Paragnorimus Becker are described: Paragnorimus atratus n. sp. from Guatemala, P. hondurensis n. sp. from Honduras and Nicaragua, and P. howdeni n. sp. from Guatemala. Based on the overlapping characters of these new species, the genus Peltotrichius Howden is placed in synonymy with Paragnorimus. Paragnorimus is given a broader definition to encompass the new species and the two species formerly placed in the genus Peltotrichius.
The National Collection of Arachnids, Instituto de Biología, Universidad Nacional Autónoma de México (México City) houses 476 chilopod samples, of which 197 are determined to genus and/or species. These are documented here and represent several new state records. Topotypes of eight species of centipedes described by R. V. Chamberlin also documented.
Localities are documented for the milliped Abacion texense (Loomis, 1837) (Callipodida: Abacionidae) whose distribution forms both the northern and southern ordinal limits in the Western Hemisphere. The westernmost component of Abacion Rafinesque, 1820, A. texense is the only milliped species whose range spans the Mississippi and Pecos rivers and the Rio Grande. Distribution extremes are in Hennepin County (Co.), Minnesota, in the north; Terrell and Potter cos., Texas, in the west; Alcorn Co., Mississippi, in the east; and southwestern Tamaulipas, Mexico, in the south. Occurrences are projected for southeastern South Dakota, northwestern Alabama, and the southwestern periphery of Tennessee. The type series of A. texense consists solely of the male holotype, so a neotype will be needed if this individual is ever lost, because no paratypes were officially designated.
Indo-European is a branch of Indo-Uralic which was radically transformed under the influence of a North Caucasian substratum when its speakers moved from the area north of the Caspian Sea to the area north of the Black Sea (cf. Kortlandt 2007b). As a result, Indo-European developed a minimal vowel system combined with a very large consonant inventory including glottalized stops, also grammatical gender and adjectival agreement, an ergative construction which was lost again but has left its traces in the grammatical system, especially in the nominal inflection, a construction with a dative subject which was partly preserved in the historical languages and is reflected in the verbal morphology and syntax, where it gave rise to new categories, and a heterogeneous lexicon. The Indo-Uralic elements of Indo-European include pronouns, case endings, verbal endings, participles and derivational suffixes. In the following I shall give an overview of the grammar of Proto-Indo-European as it may have been spoken around 4000 BC in the eastern Ukraine, shortly after the ancestors of the Anatolians left for the Balkans (for more recent developments I refer to Beekes 1995).
The Opisthobranchia comprise highly specialized marine gastropods and have therefore been subject to diverse investigations covering various biological disciplines. However, a robust phylogeny of these gastropods is still lacking and several subclades have only been rarely studied. Furthermore, crucial aspects for the evolution of Opisthobranchia have not been comparatively analysed. Therefore, the aim of the present thesis is to gain new insights into the phylogeny of the Opisthobranchia with special focus on certain critical groups (Pleurobranchomorpha, Acteonoidea) and to assess several crucial features of the evolution of the investigated clades. The combination of four different gene markers (18S rDNA, 28S rDNA, 16S rDNA and CO1) and modern molecular systematic analysis tools were used to construct phylogenetic hypotheses focussing on Opisthobranchia as a whole as well as Pleurobranchomorpha and Acteonoidea in more detail. Intriguing new aspects of phylogeny and evolution of Opisthobranchia were revealed. First of all, monophyly of Opisthobranchia is definitely rejected based on the present data, while monophyly of Euthyneura (comprising Opisthobranchia and Pulmonata) is supported. Monophyly of opisthobranch subclades is confirmed for Nudipleura (as well as its constituting groups Nudibranchia and Pleurobranchomorpha), Umbraculida, Pteropoda (as well as subclades Thecosomata and Gymnosomata) and Acochlidiacea, for Cephalaspidea (if Runcinacea is regarded as a separate clade) and for Sacoglossa (if Cylindrobulla is accepted as an Oxynoacea). Aplysiomorpha are rendered paraphyletic due to the position of Akera bullata, but this result needs further investigation and should be considered with caution. The Nudipleura are found as the first single offshoot of the Euthyneura implying an early evolutionary separation of the last common ancestor of this clade. The remaining taxa form two main clades, one comprising the opisthobranch subgroups Umbraculida, Cephalaspidea, Aplysiomorpha and Pteropoda, while the other contains the pulmonate taxa and the opisthobranch Sacoglossa and Acochlidiacea. The interrelationships within these clades remain largely unresolved due to low statistical support values. However, a possible sister group relationship of Acochlidiacea and Eupulmonata receives statistical support. Opisthobranchia display various highly specific adaptations to diverse food sources. However, evolution of these specialized traits has never been assessed at an analytical level. The current thesis reconstructs the evolution of dietary preferences with novel methodologies based on the newly proposed phylogenetic hypothesis. Reconstruction of dietary evolution revealed herbivory as the ancestral condition in Euthyneura implying that carnivory evolved at least five times independently in the diverse lineages. The first comprehensive molecular phylogenetic hypothesis of the Pleurobranchomorpha could not reveal monophyly of the two main subclades Pleurobranchaeidae and Pleurobranchidae. This is due to the position of a single taxon (Euselenops luniceps) which is assigned to the Pleurobranchaeidae based on morphology but clusters within Pleurobranchidae in the current hypothesis. Furthermore, the tribe Berthellini and the genus Berthella are rendered paraphyletic by the current analyses. The results of molecular systematic analyses were used to reconstruct historical biogeography of Pleurobranchomorpha. Four different methodological approaches were applied yielding ambiguous results for Pleurobranchomorpha. However, the Pleurobranchidae comprising about 80% of the extant Pleurobranchomorpha most probably derived from an Antarctic origin. Dating of the phylogenetic tree via molecular clock methods yielded divergence of Pleurobranchidae into the Antarctic Tomthompsonia antarctica and the remaining species in Early Oligocene. Afterwards the latter underwent rapid radiation during Oligocene and Early Miocene. This divergence event coincides with two major geological events in the Antarctic region. On the one hand, the onset of glaciation and on the other hand the opening of the Drake Passage with concurrent formation of an Antarctic circumpolar current (ACC). I suppose that these sudden and dramatic changes in climate and palaeogeography probably accounted for migration of the last common ancestor of Pleurobranchidae (besides Tomthompsonia) into warmer regions via the Drake Passage to the Western Atlantic and Eastern Pacific and via the South Tasman Rise to the Indo-West Pacific. Furthermore, the ACC may have triggered larval dispersal to the Eastern Atlantic. The phylogenetic position of Acteonoidea has been a matter of debate for decades and they have long been considered as basal opisthobranchs. Results of the present thesis rather support placement in “Lower Heterobranchia” as sister group of Rissoelloidea. The current division of Acteonoidea into three families has never been investigated by means of phylogenetic methods. Thus, this thesis provides the first comprehensive investigation of this clade challenging present division into three families. The results rather support division into two main clades with the monogeneric Bullinidae clustering within Aplustridae doubting its separate status. Additionally, Rictaxis punctocaelatus which has been assigned to Acteonidae clusters basal to Aplustridae rendering Acteonidae paraphyletic. Since information on morphology of R. punctocaelatus was lacking until now, I conducted the first detailed investigation on morphology and histology of this species in order to reassess the unexpected molecular systematic placement. Character tracing analyses revealed similarities with both acteonoidean families implying an intermediate position of this species which might be assigned to a separate family in the future. Furthermore, the common features of Acteonidae and Rictaxis (massive shell, small foot, anterior mantle cavity opening, and absence of oral gland) are possibly plesiomorphic for the whole Acteonoidea. In summary, the results of the present thesis provide valuable novel insights into the phylogeny and evolution of the Opisthobranchia by employing state-of-the-art approaches of molecular systematics and evolutionary reconstruction. Thus, diverse hypotheses on opisthobranch phylogeny and evolution were either supported or rejected as well as novel hypotheses proposed which offer the basis for further research on these extraordinary gastropods.
Recently, the first part of the morphological revision of the Southeast Asian water monitor lizards of the Varanus salvator (Laurenti, 1768) species group provided a taxonomic overview over the members of this successful and widespread species complex (Koch et al. 2007). There, the Philippine taxa marmoratus, nuchalis and cumingi were reelevated to species status due to diagnostic morphological characteristics, e.g. significantly enlarged scales on the neck region. In this second part of the ongoing revision, these three species are re-investigated using additional voucher specimens and advanced statistical techniques including canonical variates analysis and principal component analysis. Our new investigations indicate that V. marmoratus represents a composite species, comprising at least three distinct taxa. Hence, the populations of the Sulu Archipelago (Tawi-Tawi Island) and those of the Palawan region are described as new species, viz. Varanus rasmusseni sp. nov. and V. palawanensis sp. nov., respectively. The allopatric island populations of V. cumingi inhabiting Samar, Leyte, and Bohol (the East Visayan subregion) show characteristic and geographically correlated colour patterns distinct from the type locality Mindanao (the second subregion of Greater Mindanao), warranting subspecific partition of this species. The new subspecies is named V. cumingi samarensis ssp. nov. In contrast, the taxonomic status of V. nuchalis remained unchanged, although this species shows some considerable variation in colour pattern. The systematic chapters are supplemented with notes about biology and conservation status. The hitherto underestimated diversity and zoogeography of Philippine water monitors is discussed in the light of Pleistocene sea level fluctuations. Finally, we introduce a scenario for the evolution and spread of Southeast Asian water monitor lizards and provide an identification key for the Philippine members of the V. salvatoI' complex.
Poster presentation at 5th German Conference on Cheminformatics: 23. CIC-Workshop Goslar, Germany. 8-10 November 2009 We demonstrate the theoretical and practical application of modern kernel-based machine learning methods to ligand-based virtual screening by successful prospective screening for novel agonists of the peroxisome proliferator-activated receptor gamma (PPARgamma) [1]. PPARgamma is a nuclear receptor involved in lipid and glucose metabolism, and related to type-2 diabetes and dyslipidemia. Applied methods included a graph kernel designed for molecular similarity analysis [2], kernel principle component analysis [3], multiple kernel learning [4], and, Gaussian process regression [5]. In the machine learning approach to ligand-based virtual screening, one uses the similarity principle [6] to identify potentially active compounds based on their similarity to known reference ligands. Kernel-based machine learning [7] uses the "kernel trick", a systematic approach to the derivation of non-linear versions of linear algorithms like separating hyperplanes and regression. Prerequisites for kernel learning are similarity measures with the mathematical property of positive semidefiniteness (kernels). The iterative similarity optimal assignment graph kernel (ISOAK) [2] is defined directly on the annotated structure graph, and was designed specifically for the comparison of small molecules. In our virtual screening study, its use improved results, e.g., in principle component analysis-based visualization and Gaussian process regression. Following a thorough retrospective validation using a data set of 176 published PPARgamma agonists [8], we screened a vendor library for novel agonists. Subsequent testing of 15 compounds in a cell-based transactivation assay [9] yielded four active compounds. The most interesting hit, a natural product derivative with cyclobutane scaffold, is a full selective PPARgamma agonist (EC50 = 10 ± 0.2 microM, inactive on PPARalpha and PPARbeta/delta at 10 microM). We demonstrate how the interplay of several modern kernel-based machine learning approaches can successfully improve ligand-based virtual screening results.
Poster presentation at 5th German Conference on Cheminformatics: 23. CIC-Workshop Goslar, Germany. 8-10 November 2009 Protein kinases are important targets for drug development. The almost identical protein folding of kinases and the common co-substrate ATP leads to the problem of inhibitor selectivity. Type II inhibitors, targeting the inactive conformation of kinases, occupy a hydrophobic pocket with less conserved surrounding amino acids. Human polo-like kinase 1 (Plk1) represents a promising target for approaches to identify new therapeutic agents. Plk1 belongs to a family of highly conserved serine/threonine kinases, and is a key player in mitosis, where it modulates the spindle checkpoint at metaphase/anaphase transition. Plk1 is over-expressed in all today analyzed human tumors of different origin and serves as a negative prognostic marker in cancer patients. The newly identified inhibitor, SBE13, a vanillin derivative, targets Plk1 in its inactive conformation. This leads to selectivity within the Plk family and towards Aurora A. This selectivity can be explained by docking studies of SBE13 into the binding pocket of homology models of Plk1, Plk2 and Plk3 in their inactive conformation. SBE13 showed anti-proliferative effects in cancer cell lines of different origins with EC50 values between 5 microM and 39 microM and induced apoptosis. Increasing concentrations of SBE13 result in increasing amounts of cells in G2/M phase 13 hours after double thymidin block of HeLa cells. The kinase activity of Plk1 was inhibited with an IC50 of 200 pM. Taken together, we could show that carefully designed structure-based virtual screening is well-suited to identify selective type II kinase inhibitors targeting Plk1 as potential anti-cancer therapeutics.
The comparison of persons is pervasive in social judgement and human decision making and yet its neural substrate is poorly explored. Using functional magnetic resonance imaging we investigated the brain activities of participants comparing other persons with each other (other vs. other comparison - OOC) and with themselves (self vs. other comparison - SOC) as regards psychological (intelligence) and physical (height) characteristics. We found that the comparison of these two person characteristics differ in their neural activation patterns in the OOC as well as in the SOC with higher activity increases for intelligence than height comparison in several areas in medial frontal and orbitofrontal cortex and posterior cingulate cortex suggesting that their activation scales with the demand on person comparison. The person comparison network strikingly overlaps the one commonly described for the classic theory of mind tasks. We interpret this overlap as indicating perspective taking common to person comparison and theory of mind. Furthermore, we suggest that the neural differences between the SOC and the OOC especially in the dorsal part of the medial frontal cortex rely on the different degree of the self involved in the two types of comparisons. The results additionally suggest that the decision directions of self-relevant comparisons, especially in the intelligence comparison of the SOC, resulted in differences in the activation of the medial frontal cortex, which also relies on differences in the reward anticipation and self-relatedness of these decisions.
Influenza A (H1N1) 2009 : impact on Frankfurt in due consideration of health care and public health
(2010)
Background: In April 2009 a novel influenza A H1N1/2009 virus was identified in Mexico and in the United States which quickly spread around the world. Most of the countries established infection surveillance systems in order to track the number of (laboratory-confirmed) H1N1 cases, hospitalizations and deaths. Methods: The impact of the emergence of the novel pandemic (H1N1) 2009 virus on Frankfurt was statistically evaluated by the Health Protection Authority, City of Frankfurt am Main. Vaccination rates of the health care workers (HCWs) of the University Hospital Frankfurt were measured by the Occupational Health Service. Results: Although the virulence of pandemic (H1N1) 2009 seems to be comparable with seasonal influenza, a major patient load and wave of hospital admissions occurred in the summer of 2009. Even though the 2009 vaccination rate of the University Hospital Frankfurt (seasonal influenza [40.5%], swine flu [36.3%]) is better than the average annual uptake of influenza vaccine in the German health care system (approximately 22% for seasonal and 15% for swine flu), vaccination levels remain insufficient. However, physicians were significantly (p < 0.001) more likely to have been vaccinated against swine flu and seasonal influenza than nurses. Conclusions: The outbreak of the pandemic (H1N1) 2009 in April 2009 provided a major challenge to health services around the world. Nosocomial transmission of H1N1/2009 has been documented. Present experience should be used to improve pandemic preparedness plans and vaccination programs ought to target as many HCWs as possible.
Due to an increasing awareness of the potential hazardousness of air pollutants, new laws, rules and guidelines have recently been implemented globally. In this respect, numerous studies have addressed traffic-related exposure to particulate matter using stationary technology so far. By contrast, only few studies used the advanced technology of mobile exposure analysis. The Mobile Air Quality Study (MAQS) addresses the issue of air pollutant exposure by combining advanced high-granularity spatial-temporal analysis with vehicle-mounted, person-mounted and roadside sensors. The MAQS-platform will be used by international collaborators in order 1) to assess air pollutant exposure in relation to road structure, 2) to assess air pollutant exposure in relation to traffic density, 3) to assess air pollutant exposure in relation to weather conditions, 4) to compare exposure within vehicles between front and back seat (children) positions, and 5) to evaluate "traffic zone"- exposure in relation to non-"traffic zone"-exposure. Primarily, the MAQS-platform will focus on particulate matter. With the establishment of advanced mobile analysis tools, it is planed to extend the analysis to other pollutants including including NO2, SO2, nanoparticles, and ozone.
Background: Hemorrhagic shock/resuscitation is associated with aberrant neutrophil activation and organ failure. This experimental porcine study was done to evaluate the effects of Fas-directed extracorporeal immune therapy with a leukocyte inhibition module (LIM) on hemodynamics, neutrophil tissue infiltration, and tissue damage after hemorrhagic shock/resuscitation. Methods: In a prospective controlled double-armed animal trial 24 Munich Mini Pigs (30.3 +/- 3.3 kg) were rapidly haemorrhaged to reach a mean arterial pressure (MAP) of 35 +/- 5 mmHg, maintained hypotensive for 45 minutes, and then were resuscitated with Ringer's solution to baseline MAP. With beginning of resuscitation 12 pigs underwent extracorporeal immune therapy for 3 hours (LIM group) and 12 pigs were resuscitated according to standard medical care (SMC). Haemodynamics, haematologic, metabolic, and organ specific damage parameters were monitored. Neutrophil infiltration was analyzed histologically after 48 and 72 hours. Lipid peroxidation, and apoptosis were specifically determined in lung, bowel, and liver. Results: In the LIM group, neutrophil counts were reduced versus SMC during extracorporeal immune therapy. After 72 hours, the haemodynamic parameters MAP and cardiac output (CO) were significantly better in the LIM group. Histological analyses showed reduction of shock-related neutrophil tissue infiltration in the LIM group, especially in the lungs. Lower amounts of apoptotic cells and lipid peroxidation were found in organs after LIM treatment. Conclusions: Transient Fas-directed extracorporeal immune therapy may protect from posthemorrhagic neutrophil tissue infiltration and tissue damage.
Objective: To summarise the benefits and harms of treatments for women with gestational diabetes mellitus. Design: Systematic review and meta-analysis of randomised controlled trials. Data sources: Embase, Medline, AMED, BIOSIS, CCMed, CDMS, CDSR, CENTRAL, CINAHL, DARE, HTA, NHS EED, Heclinet, SciSearch, several publishers’ databases, and reference lists of relevant secondary literature up to October 2009. Review methods: Included studies were randomised controlled trials of specific treatment for gestational diabetes compared with usual care or "intensified" compared with "less intensified" specific treatment. Results: Five randomised controlled trials matched the inclusion criteria for specific versus usual treatment. All studies used a two step approach with a 50 g glucose challenge test or screening for risk factors, or both, and a subsequent 75 g or 100 g oral glucose tolerance test. Meta-analyses did not show significant differences for most single end points judged to be of direct clinical importance. In women specifically treated for gestational diabetes, shoulder dystocia was significantly less common (odds ratio 0.40, 95% confidence interval 0.21 to 0.75), and one randomised controlled trial reported a significant reduction of pre-eclampsia (2.5 v 5.5%, P=0.02). For the surrogate end point of large for gestational age infants, the odds ratio was 0.48 (0.38 to 0.62). In the 13 randomised controlled trials of different intensities of specific treatments, meta-analysis showed a significant reduction of shoulder dystocia in women with more intensive treatment (0.31, 0.14 to 0.70). Conclusions: Treatment for gestational diabetes, consisting of treatment to lower blood glucose concentration alone or with special obstetric care, seems to lower the risk for some perinatal complications. Decisions regarding treatment should take into account that the evidence of benefit is derived from trials for which women were selected with a two step strategy (glucose challenge test/screening for risk factors and oral glucose tolerance test).
Feral cats (Felis catus), introduced into Australia with European settlers in the 19th century, colonized the entire Australian continent in less than 100 years, including the Australian arid zone which covers more than 70% of the continent. Feral cats are responsible for the decline and extinction of a number of native species and the failure of a number of reintroduction attempts, especially in the arid zone. Many ecological studies on feral cats have been conducted on home range size and movement patterns in different environments, abundance and diet, with the aim of gaining a better understanding about their successful invasion of the Australian continent. There are no physiological studies on the feral cat to date. However, there is evidence that there is a strong interrelation between physiology and abiotic factors such as climate. Thus, distribution, habitat, and dispersal of species can not fully be understood without background knowledge of physiology. This PhD aims to contribute to a better understanding of three physiological parameters: metabolism, body mass and body temperature patterns. These parameters may possibly identify physiological adaptation to different climate zones, seasonal conditions and island isolation.
Until now, the NW Indian Ocean was sparsely covered with coral proxy records, and records from the Maldives Archipelago do not exist. The first such coral proxy record from the central Maldives is presented in this study. It originates from a massive Porites lutea (Quoy and Gaimard, 1833) colony that was sampled March 2007 in the lagoon of Rasdhoo Atoll (4°N/ 73°W), which is located in the central Maldives. The record spans a period of 90 yrs and reaches back to 1917 AD with monthly to bimonthly resolution. This study investigates temporal variations of the skeletal stable oxygen (delta18O) and carbon (delta13C) isotopes, the strontium-to-calcium (Sr/Ca), and the annual extension-rates, and their relationship to historical climate variations 1917-2007. Annual extension-rates show an increase over the 20th century, and are correlated with instrumental sea surface temperatures (SST). The interannual variation of the extension-rates within 2.5-4 years is driven by the El Niño-Southern Oscillation (ENSO). The amount of skeletal extension during the summer months is triggered by variations in the strength of the SW monsoon. Interannual and decadal variability in monsoon current activity (18-19 yrs) and rainfall over India are an expression of the summer monsoon strength. This is the reason why a statistical link between coral extension-rates and precipitation over India can be established. This implies that annual extension-rates in corals can be used as a new proxy for Indian monsoon variability on decadal resolution. The delta18O record exhibits the 20th century warming trend that is influenced by the effect of monsoon-induced cooling. delta18O also reveals interannual ENSO triggered variability, which is due to ENSO-forced variations in SST and sea surface salinity (SSS). A decadal variation at 12-14 yrs cannot be linked to SST variations in the NW Indian Ocean, but with decadal variations of SSS. They could be caused by ENSO- forced variations of the monsoon currents during the mature phase of ENSO teleconnections in the Indian Ocean in boreal winter. The Sr/Ca record does not indicate a significant warming, in spite of the observed SST rise at the sampling site. Changes in seawater Sr/Ca cannot be excluded. Nevertheless, interannual ENSO forcing is still evident. Evidence for the Pacific Decadal Oscillation (PDO) is found during 1917-1955. Afterwards, the Sr/Ca data indicate the disappearance of PDO forcing. By the combination of Sr/Ca and delta18O it is possible to detect ~80% of historical El Niño and La Niña events at the sample site. This study confirms the notion that interannual to multi-decadal climate fluctuations in the Pacific play a crucial role for climate variability in the Indian Ocean.
In this thesis, we study the properties of excitations in the systems of interacting fermions. These excitations can be bosonic such as collective modes which we handle in the first part of this thesis or fermionic like quasi particles and quasi holes. One of the important points, to investigate the excitations is their damping which corresponds to their life-time in the system. This thesis consists of two parts, where in both parts, we use the field-theoretical methods to examine the problem.
Background: Previously, we showed that glioma pathogenesis related protein (GliPR) is induced in CEM T cells upon HIV-1 infection in vitro. To examine whether GliPR plays a role as HIV dependency factor (HDF), we tested the effect of GliPR suppression by siRNA on HIV-1 replication. Results: Induction of GliPR expression by HIV-1 was confirmed in P4-CCR5 cells. When GliPR was suppressed by siRNA, HIV-1 replication was significantly reduced as measured by HIV-1 transcript levels, HIV-1 p24 protein levels, and HIV-1 LTR-driven reporter gene expression, suggesting that GliPR is a cellular co-factor of HIV-1. Microarray analysis of uninfected HeLa cells following knockdown of GliPR revealed, among a multitude of gene expression alterations, a down-regulation of syndecan-1, syndecan-2, protein kinase C alpha (PRKCA), the catalytic subunit beta of cAMP-dependent protein kinase (PRKACB), nuclear receptor co-activator 3 (NCOA3), and cell surface protein CD59 (protectin), all genes having relevance for HIV-1 pathology. Conclusions: The up-regulation of GliPR by HIV-1 and the early significant inhibition of HIV-1 replication mediated by knockdown of GliPR reveal GliPR as an important HIV-1 dependency factor (HDF), which may be exploited for HIV-1 inhibition.
Background: Autism spectrum disorders (ASDs) are a group of highly heritable neurodevelopmental disorders which are characteristically comprised of impairments in social interaction, communication and restricted interests/behaviours. Several cell adhesion transmembrane leucine-rich repeat (LRR) proteins are highly expressed in the nervous system and are thought to be key regulators of its development. Here we present an association study analysing the roles of four promising candidate genes - LRRTM1 (2p), LRRTM3 (10q), LRRN1 (3p) and LRRN3 (7q) - in order to identify common genetic risk factors underlying ASDs.
Methods: In order to gain a better understanding of how the genetic variation within these four gene regions may influence susceptibility to ASDs, a family-based association study was undertaken in 661 families of European ancestry selected from four different ASD cohorts. In addition, a case-control study was undertaken across the four LRR genes, using logistic regression in probands with ASD of each population against 295 ECACC controls.
Results: Significant results were found for LRRN3 and LRRTM3 (P < 0.005), using both single locus and haplotype approaches. These results were further supported by a case-control analysis, which also highlighted additional SNPs in LRRTM3.
Conclusions: Overall, our findings implicate the neuronal leucine-rich genes LRRN3 and LRRTM3 in ASD susceptibility.