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The paper deals with the biology, morphology and anatomy of seven species of syrphid larvae viz. Syrphus luniger Meig., S. balteatus De Greer, S. ribesii Linne, Catabomba pyrastri Linne, Sphaerophoriae flavicauda Zett., Sph. scripta Linne, and Platychirus scutatus Meig. The habitat, mode of progression, aphidophagous habits and characteristic coloration are described for each species. It is shown that the larvae of aIl the above species, like larvae of other cyclorrhaphous Diptera, definitely pass through three stages separated by two moults. The mode of dehiscence of the puparium is described briefly. Each of the species, except Catabomba pyrustri, has three generations in the breeding season which lasts from May to October. Platychirus scutatus hibernates only in the larval stage, but the other species may be found in both the larval and pupal stages during the winter. The larvae of all the above species, except syrplzus balteatus, are commonly parasitized by ichneumonid larvae. The morphology of the egg, the three larval stages and the puparium of S. luniger is described in detail. The characters common to the third stage larvae of all the species deaIt with are summarized and short descriptions of the third stagelarvae andpuparia of the individual species are given. The general appearance of the living larvae and details of the buccopharyngeal armature, spiracles and puparia of each of the species is represented in figures. In connexion with the pupae a number of new structures are described arid it is suggested that some of them are concerned with the formation of the characteristic shape of the puparium and with the dehiscence of the puparium. Internal pupal spiracles are present in all the species dealt; with, but external pupal spiracles are present only in Platychirus scutatus. The anatomy of P. scutatus is described and figured, an account being given of all the structures except the musculature of the body wall. Study of the anatomy affords evidence as to the carnivorons mode of Iife of the larvae and also indicates that tho larvae have evolved from aquatic forms. The comparative morphology of the Syrphinae is discussed with respect to the relationship of the Syrphinae to other Aschiza aiid to the cyclorrhaphous Diptera.
This paper is a monographic revision of tlie Holarctic genus Hilarimorpha Schiner. Twenty-seven species are recognized, twenty-two of which are new: Hilarimorpha abuta, bumulla, californica, clavata, cunata, desta, kena, lamara, Iantha, loisae, mandana, mentata, modesta, parva, pitans, punata, reparta, robertsoni, sidora, stena, tampa, and varda. Two described species from Asia, Hilarimorpha maculata and orientalis, are removed from the genus. In addition to a taxonomic revision of the genus, this study treats geographical distribution of the species, and the relationship of the genus to othe families of brachycerous Diptera.
1. The root tip of Cucurbita maxima possesses a single histogen from which all the primary root tissues arise. 2. The primary root is exarch, tetrarch. Differentiation of the large central metaxylem vessels is retarded; pith is not present. 3. The primordium of a secondary root is formed from the cortex, including the endodermis, as well as the pericycle of the primary root. 4. The transition extends from approximately 1 cm. below the peg to just above it. At the lowest level pith differentiates in the center and the metaxylem takes a peripheral position just within the phloem. Each primary xylem strand diverges into two arms extending laterally and joining the metaxylem. These arms separate, resulting in a siphonostele of four tangential transition bundles. These divide into two parts each, forming a total of eight bundles which become endarch. 5. Of these eight bundles usually two pairs anastomose, then divide into three, producing a total of ten bundles which continue through the hypocotyl. Additional bundles may arise. 6. The bundle is considered bicollateral on the basis of ontogeny; it shows a differentiation of internal phloem from the procambial tissue at the same time that the external metaphloem differentiates. (The study of a single species allows no interpretation on the basis of phylogeny.) 7. A suggestion is made concerning the differentiation of two types of phloem, the one called fascicular phloem and the other called connective phloem. Differences in origin, structure, and distribution of the two types are described. 8. In the cotyledonary node tangential anastomoses produce a cotyledonary plate of four parts. Continuations from these form two traces to each cotyledon. Before the cotyledon diverges completely, each trace branches laterally to form a basal vein from which arise four or more bundles which are the principal veins in the blade of the cotyledon. 9. The bundles of the epicotyl differentiate against the parts of the cotyledonary plate. The epicotyl is retarded in its development except for the median trace to the first foliage leaf. The early differentiation of this trace may account for the characteristic short first internode.
Plastid behavior in reciprocally different crosses between two races of Medicago truncatula Gaertn.
(1962)
During my mork on the inheritance of symmetry characters in Medicago (1956), chance played into my hands a case of fairIy pronounced reciprocal differentes in the behavior of plastids in a cross between two local races of Medicago truncatula GAERTN. which so far I know are not given even varietal rank. The facility in producing the hybrids encouraged me to investigate the material, and the results are reported in this paper.
Introductory chapters on the geography, vegetation and history of botanical ex loration are followed by a catalogue of 331 species of wild vascular plants, 90% of which represent first records for the island. Synonymy, references, localities and ecological data are given for each species in a condensed form. The taxonomy, nomenclature and distribution of some taxa are discussed; in one case (Silene cythnia) a drawing and a distribution map are supplied. Nomenclatural novelties are validated in the genera Centaurea, Matricana, Melica (by W. Hempel) and Trifolium. A phytogeographical and ecological analysis of the flora demonstrates its striking banality and the unexpectedly high proportion of anthropophytes. No pliytogeographical link with tlie other E. Aegean Isiands and Anatolia exists, but there are some affinities with the Cyclades. The observations are consistent with the hypotliesis of a long insular isolation leading to a strong depletion or even destruction of the original flora, which has been replaced by long-distance dispersed and anthropophytic elements.
A world revision of the four entedonine (Hymenoptera: Eulophidae: Entedoninae) genera of larval parasitoids of thrips (Thysanoptera) is presented: Ceranisus Walker, 1841, Entedonomphale Girault, 1915 stat. rev. (reinstated as a valid taxon from previous synonymy under Ceranisus, with type species E. margiscutum Girault, 1915 stat. rev.), Goetheana Girault, 1920, and Thripobius Ferrière, 1938. The following new generic synonymies are proposed: Cryptomphale Girault, 1917, Entedonastichus Girault, 1920, Pirenoidea Girault, 1922, and Thripoctenoides Erdös, 1954 under Entedonomphale. The proposed new combinations are as follows: Entedonomphale bicolorata (Ishii, 1933), E. nubilipennis (Williams, 1916), and Thripobius javae (Girault, 1917) from Ceranisus; Entedonomphale carbonaria (Erdös, 1954), E. dei (Girault, 1922), E. kaulbarsi (Yoshimoto, 1981), and E. mira (Girault, 1920) from Entedonastichus. New synonymies are proposed for the following species: Ceranisus vinctus (Gahan, 1932) under Ceranisus menes (Walker, 1839), Diglyphus aculeo Walker, 1848 under Ceranisus pacuvius (Walker, 1838); Ceranisus maculatus (Waterston, 1930) and Thripobius semiluteus Boucek, 1976 under Thripobius javae (Girault, 1917); Entedonastichus albicoxis (Szelényi, 1982) under Entedonomphale carbonaria (Erdös, 1954), and Entedonastichus gaussi (Ferrière, 1958) under Entedonomphale bicolorata (Ishii, 1933). Eleven new species are described: Ceranisus barsoomensis and C. votetoda (Australia), C. udnamtak (Nepal); Entedonomphale boccaccioi (USA), E. esenini (Madagascar), E. lermontovi (South Africa), E. quasimodo and E. zakavyka (Australia); Goetheana pushkini (Japan and Republic of Korea) and G. rabelaisi (Australia); and Thripobius melikai (China). Three species are excluded from Ceranisus: C. ancylae (Girault, 1917) (mistakenly listed in Ceranisus) as well as C. nigricornis Motschulsky, 1863 and C. semitestaceus Motschulsky, 1863, both taxa incertae sedis. New data are provided on the distribution and host associations of many of the species included in this review.
Neogastropods are usualiy accepted as the most advanccd prosobranchs, though their organization is approached in several respects in some higher families of Mesogastropoda. This seems, however, to be due to parallel evolution and the neogastropods originated from a much lower grade of mesogastropod. Although some workers derive them from an archaeogastropod stock there are too many features in their anatomy characteristic of mesogastropods rather than of archaeogastropods for this to bc acceptable. On the whofe, neogastropods are a rather uniform group of prosobranchs in their shell, external features, and internal anatomy. In only one System do they show, by comprison with archaeo- and mesogastropods, both extreme specialization and considerable variation: this is the gut, which is in several ways unlike that of any other prosobranch. This is to be associated with their carnivorous way of life, in which respect they again differ markedly from meso- and archaeogastropods. Taylor, Morris Br Taylor (1980) have shown how neogastropod species differ amongst themselves not, primarily, in their rnode of life, but in their often narrow choice of prey. Since the anatomical requirements for predation are more or less constant, the different species remain similar in organization and are often sympatric. In these respects neogastropods differ markedly from mesogastropods, whose adaptive radiation has been extensive and primarily in relation to mode of life. Separation of neogastropods from mesogastropods rests mainly on the siphonal canal in the shell, the siphon on the mantle edge, the rachiglossate or toxoglossate radula, and the presence of a pleurembolic proboscis or one of its varieties (Smith, 1967). The osphradium is large and its axis carries a double series of lamellae, giving it a gill-like appearance. Males always have a penis and females usually a ventral pedal gland. lnternally the anterior part of the alimentary caiial has becorne elaborate, with a complex glandular equipment, and the wall of the kidney is more folded than in mesogastropods. The nervous systern is concentrated, though the visceral ganglia remain posteriorly placed. Eggs are laid in capsules attached to the substratum. A free larval stage is often suppressed and food eggs are common, but neither of these features has much taxonomic significance, occurring apparently randomly throughout the group. Because of their general similarity classification of the Neogastropoda has proved to be no easy task, and there is still no universally-accepted subdivision of the order into superfamilies. It is generally agreed, however, that the order may be split into two groups, primarily on the basis of radular structure. The more primitive of these, the Rachiglossa, has a radula with typically 3 teeth per row; the more advanced, the Toxoglossa, has a radula which, in more primitive genera, resembles the rachiglossate, but which Comes, in more advanced toxoglossans, to have only a single tooth in action at a time. Each tooth has then become scroll-like and is used for the injection of poison from a poison gland into the prey (Shimek & Kohn, 1981). The group Toxoglossa is agreed to contain the superfamily Conacea which includes (as Recent forms) the families Turridae, Conidae, and Terebridae, all with poison apparatus, though with very different shells. Risbec (1955), followed by Taylor & Sohl (1962), has added a second superfamily Mitracea containing, in the family Mitridae, a grouping of genera selected from that family as earlier understood. These have a rachiglossate radula and an apparent poison gland not irnrnediately comparable with that of undoubted toxoglossans. This reclassification of mitrids has not found favour with subsequent workers (Cernohorsky, 1966, 1970; Ponder, 1972). Ponder (1973) made a case for adding a third suborder to the two mentioncd above. This was to contain the single superfamily Cancellariacea with the one family Cancellariidae. The case rests on the unique character of their radula. It is, however, when one turns to the remaining rachiglossan families and- attempts to assign them to superfamilies that difficulties mount. Three groupings Iiave been conventionally recognized - Muricacea, Buccinacea, and Volutacea, though it has often appeared that the last was a collection of animals not obviously assignable to the other two rather than clearly related amongst thernselves. Ponder (1973) came to the somewhat pessimistic conclusion that all rachiglossans should be put into a single taxon, for which he used the name Muricacea. It seems to us, however, that certainly within the limited group of anirnals with which we have to deal here, but even in a broader context, there is still some validity - and certainly convenience - in the older Separation, when due importance is given to internal anatomy; we propose, therefore, to retain the three superfamilies in dealing with a group which is otherwise too large for easy treatment. We adopt this arrangement the more readily as we have no volutacean mernbers of the fauna with which we have to deal, provided that we accept Ponder's proposal to create a separate superfamily for cancellariids. This allows the remaining superfamilies to be split into Muricacea and Buccinacea, and it is between these two superfamilies that lines of division may most obviously be drawn. Taylor & Sohl (1962) noted about 800 genera and subgenera in the rachiglossan group. The Buccinacea, with nearly 400, is rivalled for size only by the superfamilies Rissoacea and Cerithiacea amongst all the prosobranchs. A difficulty arises at this point in relation to the number of species which have been described. Many neogastropods are not intertidal in occurrence. Their capture is dependent upon dredging, a method which can often do no more than sample a few isolated spots on the ocean bed. Many species have been described on the basis of these samples without any real knowledge of the variation whjch may affect populations. It seems, indeed, probable that many of these are no more than local varieties, especially when it is remembered that the anatomy of many is very imperfectly known. We have, therefore, been conservative in nomenclature and tended to use broad generic groupings where others might have used narrower ones. The latter may be right, but it is prernature to be sure of this.
The cirripeds sampled by the N. O. Jean Charcot from the Azores region include thirty-four species: twenty lepadomorphs, eight verrucomorphs and six balanomorphs. Among these are two new species: Arcoscalpellum eponkos n.sp. and Tesseropora arnoldi n.sp. and several little known species. The family Verrucidae is revised, and a key to the genera is included. Verruca and Metaverruca are rediagnosed, two new genera are proposed: Newmaniuerruca n.g. and Costatoverruca n.g. A list of recent species of Verrucidae is provided, reported with keys to all of the species. Forty-five species of cirripeds are reported from the Azores region, of which one third are endemic.
Linnaeus as an evolutionist
(1909)
Colorectal cancer is one of the most cause of cancer and death in Western societies. Recently, histone deacetylase inhibitors (HDIs), which regulate transcription through modification of chromatin structure, received considerable interest on the ground of they ability to stop the growth and induce cell death in colon cancer tumours, representing a promising transcriptional cancer therapy. This kind of cancer initiates with an activating mutation in the Wnt cascade, allowing the nuclear import of ß-catenin binding to LEF/TCF. This induces the overexpression of growthpromoting oncogenes affecting the cell cycle arrest, lineage-specific cell differentiation and apoptosis processes. In addition, ß-catenin also participates in cell-cell adhesion via interactions with E-cadherin, which can be repressed by families of transcription factors Snail and ZEB. This, and gain of vimentin has been closely correlated with local invasion and metastasis since they avoid the induction of apoptosis through the loss of cell anchorage, a phenomenon called anoikis. In this process the inactivation of the kinases Src an FAK provoking disruption of focal adhesion complexes through is involved. LAQ824 is a HDAC inhibitor derivative of hydroxamic acid, which present antitumor effect in colon and other cancer cells. The aim of this study is to analyse the effect of LAQ824 in cell proliferation, apoptosis, motility and tumour invasion in a colon carcinoma model based on the adenoma-carcinoma sequence descrying trough which pathways LAQ824 is able to cause these effects. Here I demonstrate for the first time that a HDAC inhibitor, LAQ824, induces detachmentinduced cell death of colon cancer cell lines HCT116 and HT-29, a phenomenon called anoikis, in a caspase-dependent and p53-independent manner. In this process the component of the Wnt signalling pathway ß-catenin is involved. Furthermore LAQ824 upregulates the adhesion molecule E-cadherin expression in these cell lines independently of its repressor Snail, but probably mediated by the repressor ZEB. In addition LAQ824-induced anoikis is caused by disruption of focal adhesion complexes through inhibition of the activity of the kinases FAK and Src inhibiting cell motility indicating a strong antimetastatic potential for LAQ824.
1. Halobacillus halophilus akkumuliert zum Ausgleich geringer, extrazellulärer Wasserpotentiale kompatible Solute. Bei Anzuchten in Gegenwart von 0,4 – 1,5 M NaCl wurden Glutamin und Glutamat als die dominierenden kompatiblen Solute identifiziert, während zwischen 2,0 und 3,0 M NaCl Prolin das dominierende Solut darstellt. Außerdem wurde Ectoin als zweites kompatibles Solut gefunden, das spezifisch bei hohen Salzgehalten akumuliert wird. Die Konzentrationen während der exponentiellen Wachstumsphase war jedoch um den Faktor 6 – 7 geringer im Vergleich zu Prolin. 2. Aus Wachstumsexperimenten in Gegenwart unterschiedlicher Anionen war bekannt, dass Glutamat, im Gegensatz zu Gluconat und Nitrat, in der Lage ist, das Wachstum von H. halophilus auch in Abwesenheit von Chlorid zu ermöglichen. Um der Frage nachzugehen, ob die wachstumsfördernde Wirkung von unphysiologisch hohen Glutamat-Konzentrationen im Medium auf die Verwendung von Glutamat als kompatiblem Solut in den Zellen zurückzuführen ist, wurden Gesamtsolutepools von Chlorid-, Nitrat-, Gluconat- und Glutamat-gezogenen Zellen gemessen. In NaCl-gezogenen Zellen zeigte sich Glutamat als dominantes Solut, während Prolin und Glutamin einen geringeren Teil am Gesamtpool ausmachten. In Nitrat-gezogenen Zellen betrug der Gesamtpool nur noch 83% und in Gluconat-gezogenen Zellen nur noch 27% im Vergleich zu Chlorid-gezogenen Zellen. Zellen, die mit Glutamat gezogen wurden, zeigten jedoch eine Gesamtkonzentration an Soluten, die ca. 100% über dem Vergleichswert aus Chlorid-gezogenen Zellen lag. Die Konzentration an Glutamin in den Zellen stieg dabei um 168%, die Konzentration an Glutamat sogar um 299%. Die Prolinkonzentration verringerte sich um 32%. Diese Daten belegen, dass der wachstumsstimulierende Effekt von Glutamat auf die Verwendung als kompatibles Solut zurückzuführen ist. 3. Zur Untersuchung der molekularen Grundlage der Salzadaptation sowie der Abhängigkeit von Chlorid in H. halophilus wurde in Zusammenarbeit mit der Gruppe von Prof. D. Oesterhelt (MPI für Biochemie, Martinsried) die Sequenzierung des Genoms begonnen. Das Projekt ist zur Zeit noch nicht abgeschlossen und befindet sich in der „Lückenschluß-Phase“. Die bisherigen Sequenzdaten konnten dennoch für die in dieser Arbeit beschriebenen Untersuchungen herangezogen werden. Das Genom besitzt eine Größe von ca. 4,1 Mbp mit einem ungefähren GC-Gehalt von 40%. Außerdem wurden 2 Plasmide identifiziert mit einer Größe von 16047 und 3329 bp. 4. Die Schlüsselgene bekannter Biosynthesewege für Glutamin und Glutamat konnten identifiziert werden. Darunter befinden sich zwei Isogene für eine Glutamatdehydrogenase (gdh1 und gdh2), ein Gen für die große Untereinheit einer Glutamatsynthase (gltA), zwei Gene für die kleine Untereinheit einer Glutamat-Synthase (gltB1 und gltB2) und zwei Isogene für eine Glutaminsynthetase (glnA1 und glnA2). glnA1 befindet sich in einem Cluster zusammen mit einem Gen, das für einen Regulator kodiert (glnR), wie er auch aus B. subtilis bekannt ist. Über reverse Transkription von mRNA und anschließender PCR-Analyse konnte gezeigt werden, dass sowohl gltA/gltB1 als auch glnA1/glnR in einem Operon organisiert sind. 5. Wurde die Transkriptmenge der in Punkt 4 erwähnten Biosynthesegene in Zellen quantifiziert, die in Gegenwart unterschiedlicher Salzkonzentrationen (0,4 – 3,0 M NaCl) gezogen wurden, so zeigte sich keine Abhängigkeit von der Salzkonzentration für die Gene gltA, glnA1 und gdh1. Über die Transkriptmengen von gdh2 ließ sich keine abschließende Aussage treffen, da die gefundenen Transkriptmengen sehr gering waren und daher zu sehr großen Varianzen bei der Quantifizierung führten. Eine klare Abhängigkeit der Transkriptmenge von der im Medium zugesetzten Salzkonzentration konnte für glnA2 gezeigt werden. Die glnA2 mRNA-Menge stieg dabei mit steigender Salzkonzentration an und erreichte bei 1,5 – 2.0 M NaCl ein Maximum. Bei diesen Salzkonzentrationen war die Menge an mRNA ca. 4 mal höher als der Vergleichswert bei 0,4 M NaCl. Bei höhern Salzkonzentrationen sank die Menge an Transkript wieder leicht und war dann ca. nur noch 3 mal so hoch wie bei 0,4 M NaCl. 6. Die zelluläre Konzentration der glnA2-Transkripte in Abhängigkeit unterschiedlicher Anionen im Anzuchtmedium wurde untersucht. Die Quantifizierung der glnA2–mRNA ergab eine 2 mal höhere Transkriptmenge in Gegenwart von Chlorid verglichen mit Nitrat oder Gluconat. 7. Es wurde nach Enzymaktivitäten der bekannten Schlüsselenzyme im Glutamat und Glutamin-Biosyntheseweg gesucht. Eine Glutamatdehydrogenase und eine Glutamatsynthase – Aktivität konnte nicht oder nur in vernachlässigbarem Maße nachgewiesen werden. Im Gegensatz dazu konnt eine Glutaminsynthetase – Aktivität eindeutig belegt werden. Diese Aktivität erwies sich abhängig von der Art und der Konzentration des angebotenen Anions im Medium. Maximale Aktivitäten wurden mit NaCl in einer Konzentration von 2,5 – 3,0 M erreicht. Interessanterweise erwies sich die Glutaminsynthetase – Aktivität auch abhängig von der Art des im Testpuffers verwendeten Anions. Hier zeigte sich eine deutliche Stimulierung der Aktivität durch das Anion Chlorid. [Die für diesen Punkt zugrunde liegenden Daten wurden im Rahmen einer von mir mitbetreuten Diplomarbeit von Jasmin F. Sydow erhoben und sind aus Gründen der vollständigen Darstellung des Projektverlaufes mitaufgeführt!] 8. Wie im Punkt 1 dargelegt, wird Prolin vor allem bei hohen Salzkonzentrationen in H. halophilus - Zellen akkumuliert. Neben der Abhängigkeit von der Salzkonzentration wurde außerdem die Abhängigkeit von der Wachstumsphase untersucht. Die Analyse der Prolinkonzentrationen während verschiedener Wachstumsphasen in Kulturen, die bei 1,0 bzw. 2,5 M NaCl angezogen wurden, zeigte, (i) dass die Prolinkonzentration während der frühen exponentiellen Phase ca. 2,5-fach erhöht war im Vergleich zu Niedrigsalz-Zellen, (ii) dass die Prolinkonzentration beim Übergang von der frühen in die späte exponentielle Phase dramatisch abnahm (um 64% bei 2,5 M NaCl) und dass (iii) in der stationären Phase Prolin praktisch nicht mehr nachzuweisen war. 9. Die Biosynthesegene für die Herstellung von Prolin aus Glutamat konnten im Genom von H. halophilus identifiziert werden. Es handelt sich dabei um ein Cluster von 3 Genen, die für eine putative Pyrrolin-5-carboxylatreductase (proH), eine Glutamat-5-kinase (proJ), und eine Glutamat-5-semialdehyd-dehydrogenase (proA) kodieren. Mittels reverser Transkription von mRNA und anschließenden PCR-Analysen konnte gezeigt werden, dass die drei Gene ein Operon bilden. 10. Eine Quantifizierung der Transkriptmengen der Biosynthesegene proH, proJ und proA mittels quantitativer PCR in Zellen, die bei unterschiedlichen NaCl-Konzentrationen gezogen wurden, zeigte einen deutlichen Zusammenhang zwischen der Salinität des Mediums und der Menge an Transkript. Diese war umso höher, je höher die Salinität des Mediums war. Die maximale Transkriptmenge (6-fach) wurde bei einer Salzkonzentration von 2,5 M NaCl erreicht. Bei noch höherer Salzkonzentration sank die Transkriptmenge auf die ca. 5-fache Menge des Kontrollwertes ab. 11. Um die Regulation und Dynamik der Osmoregulation unabhängig vom Wachstum untersuchen zu können, wurde ein Zellsuspensions-System für H. halophilus etabliert, bei dem eine konzentrierte Zellsuspension direkt von geringen auf hohe Salzkonzentrationen überführt wurde und bei dem die Prozesse der Transkription, Translation und Solut-Biosynthese erhalten blieben. Beispielhaft wurde dieses System an der Produktion von Prolin nach einem Salzschock von 0,8 auf 2,0 M NaCl getestet. Es zeigte sich bei der Analyse, dass sich die Transkriptmengen unmittelbar nach dem Salzschock deutlich erhöhten und bereits nach 1,5 Stunden ein Maximum erreicht wurde. Verglichen mit dem Wert zu Beginn des Versuches waren die Transkriptmengen ca. 13-fach erhöht, sanken im weiteren Verlauf jedoch wieder ab und blieben bei einer 4-fachen Transkriptmenge konstant. Mit der Erhöhung der Transkriptmenge ging auch eine Erhöhung der Prolinkonzentration einher, die ein Maximum von ca. 6 μmol/mg Protein nach 6 Stunden erreichte. Auch diese Konzentration verringerte sich im weiteren Verlauf wieder und erreichte nach 20 Stunden den Ausgangswert. 12. Um den Einfluß diverser Anionen bzw. Osmolyte im Medium auf die Produktion von Prolin zu untersuchen, wurden Zellsuspensionen von H. halophilus einer Erhöhung der Osmolarität von 0,8 M auf 2,0 M unterzogen. Es zeigte sich dabei, dass die maximale Akkumulation von Prolin in Anwesenheit von Chlorid am höchsten war. Nitrat und Glutamat führten zu ähnlichen, aber leicht geringeren maximalen Konzentrationen (92 bzw. 83% des Chloridwertes). Gluconat führte noch zu einer Akkumulation von ca. 51%, während die anderen Osmolyte zu keiner Akkumulation führten. Eine Analyse der Transkriptmengen zeigte jedoch ein völlig anderes Bild. Während Chlorid, Nitrat und Gluconat zu vergleichbaren Anstiegen der Transkripmengen führten, war die maximale Transkriptmenge der Glutamatinkubierten Zellen 3-9 mal höher als in Vergleichszellen mit Chlorid. In anschließenden Titrationsexperimenten mit verschiedenen Glutamatkonzentrationen konnte gezeigt werden, dass eine minimale Konzentration von 0,2 M Glutamat ausreichend ist, um eine 90-fache Steigerung der Transkriptmenge herbeizuführen. 13. Als Antwort auf Hochsalz-Bedingungen akkumuliert H. halophilus neben Prolin auch Ectoin. Die Ectoinkonzentration bei 2,5 M NaCl war ca. 2-3 mal höher als in Zellen, die bei 1,0 M gezogen wurden. Die Bestimmung der intrazellulären Ectoin-Konzentrationen während des Wachstums zeigte außerdem, dass die Produktion von Ectoin wachstumsphasenabhängig ist. Die Konzentration in der stationären Phase war ca. 5-fach höher als in der exponentiellen Phase. Die Entwicklung der Ectoin- Konzentration verhielt sich somit reziprok zur Entwicklung der Prolin-Konzentration während des Wachstums. 14. Es wurde ein Cluster von drei Genen im Genom von H. halophilus identifiziert, deren Genprodukte die Biosynthese von Ectoin aus Aspartatsemialdehyd katalysieren. ectA kodiert dabei für eine putative Diaminobutyrat-Acetyltransferase, ectB für eine putative Diaminobutyrat-2-oxoglutarat-Transaminase und ectC für eine putative Ectoin-Synthase. Mittels reverser Transkription von mRNA und anschließenden PCR-Analysen konnte gezeigt werden, dass die drei Gene ein Operon bilden. 15. Die Transkription der ect-Gene war abhängig von der Salinität des Mediums. Ab 2,0 M stieg die Menge an RNA um das 10-fache an und erreichte bei 3,0 M ein Maximum mit der 23,5-fachen Menge. 16. Nach einem osmotischen Schock stieg die Konzentration an ect-mRNA signifikant und erreichte ein Maximum nach 3 - 4 Stunden. Das Maximum wurde somit 1,5 – 2,5 Stunden später erreicht als bei anderen Genen der Solute-Biosynthese wie etwa gdh1, das für eine Glutamatdehydrogenase, glnA2, das für eine Glutamin-Synthetase oder proH, das für eine Pyrrolin-5-Carboxylase kodiert. Die maximal erreichten Wert lagen 13-fach (ectA), 6,5-fach (ectB) und 3-fach (ectC) über dem Wert vor dem Salzschock. Gegen EctC wurden polyklonale Antikörper generiert. Western-Blot Analysen mit diesem Antikörper zeigten, dass die EctC-Menge nach 4 Stunden um das 2,5-fache stieg, dann aber wieder abfiel auf das 1,6 – 1,7-fache des Ausgangswertes. Der Rückgang an EctC fand keine Entsprechung in der gemessenen Ectoin-Konzentration, welche über einen Zeitraum von 18 Stunden kontinuierlich anstieg. Die maximale Konzentration nach 18 Stunden betrug das ca. 6,3-fache des Ausgangswertes. 17. Wurden H. halophilus Zellen mit anderen Osmolyten außer NaCl geschockt, so ergab sich folgendes Bild der Regulation der Ectoin-Biosynthese: (i) die Transkription der ect-Gene zeigte keine Chlorid-abhängige Regulation. Die maximale Transkriptmenge wurde in Gegenwart von Nitrat erreicht, wohingegen Gluconat zu vergleichbachen mRNA-Mengen führte wie Chlorid. Glutamat führte nur zu schwacher Stimulierung der Transkription. (ii) auf Ebene der Proteinmenge war zu sehen, dass die Menge an EctC nach osmotischem Schock vergleichbar war in Zellen, die mit Chlorid oder Nitrat inkubiert wurden. Gluconat führte nur zu einer 40%-igen Zunahme während andere Osmolyte nahezu wirkungslos auf die Menge an EctC blieben. (iii) die höchste Akkumulation an Ectoin nach einer plötzlichen Erhöhung der Osmolarität wurde erreicht mit Chlorid (6-fache Zunahme) gefolgt von Nitrat (5,6-fache Zunahme). Gluconat führte lediglich zu einer 3,3-fachen und Glutamat nur noch zu einer 2-fachen Steigerung der Ectoinkonzentration. Glutamat hat somit ähnliche Effekte wie Tartrat, Saccharose oder Sulfat. Succinat führte zu keiner Akkumulation und Glycin sogar zu einer deutlichen Abnahme. Die Produktion von Ectoin ist somit hauptsächlich abhängig vom Anion/Osmolyt und nur untergeordnet von der Osmolarität.
The chemiosmotic theory suggested by Peter Mitchell (Mitchell, 1961, Nature 191:144-148; see Mitchell, 1979, Science 206:1148-1159 for review) postulated that the energy released upon the oxidation of electron donor substrates is transiently stored as electrochemical proton potential, delta-p across energy-transducing membranes, which acts then as the driving force for the ATP synthesis. Membrane protein complexes can both generate and utilise a transmembrane electrochemical proton potential, either by transmembrane proton transfer or by transmembrane electron transfer coupled to protolytic reactions on opposite sides of the membrane. The dihaem-containing membrane protein complex quinol:fumarate reductase (QFR) from the anaerobic epsilon-proteobacterium Wolinella succinogenes apparently combines both of these mechanisms (Haas et al, 2005, Biochemistry 44:13949-13961; Lancaster et al, 2005, PNAS 102:18860–18865; Mileni et al, 2005, Biochemistry 44:16718-16728; Madej et al, 2006, EMBO J 25:4963-4970). QFR is the terminal enzyme of anaerobic fumarate respiration that allows bacteria to use fumarate as the terminal electron acceptor (Kröger, 1978, Biochim Biophys Acta 505:129-45; Lancaster, 2004, In: Respiration in Archaea and Bacteria Volume 1:57-85). QFR couples the two-electron reduction of fumarate to succinate to the two-electron oxidation of quinol to quinone. QFR contains two haem b groups bound by the transmembrane subunit C, which are termed the ‘proximal haem’, bP, and the ‘distal haem’, bD, according to the relative proximity to the hydrophilic subunits A and B (Lancaster et al, 1999, Nature 402:377-85). The two-electron transfer via the two haem groups has been proposed (Lancaster, 2002, Biochimica et Biophysica Acta 1565:215-231) and demonstrated (Madej et al, 2006, EMBO J 25:4963-4970) to be coupled to a compensatory, parallel transfer of two protons via a transmembrane proton transfer pathway. The two most prominent constituents of the proposed pathway were suggested to be the haem bD ring C propionate and the side chain of amino-acid residue Glu C180, after which the proton transfer pathway was named the ‘E-pathway’ (Lancaster, 2002, Biochimica et Biophysica Acta 565:215-231). The essential role of Glu C180 was supported by site-directed mutagenesis and structural and functional characterization of the enzyme E180Q, where the Glu C180 was replaced with a Gln residue (Lancaster et al, 2005, PNAS 102:18860–18865). Moreover, multiconformer continuum electrostatics (MCCE) calculations (Haas and Lancaster 2004, Biophys J 87:4298-4315) and Fouriertransformed infrared (FTIR) spectroscopy experiments (Haas et al, 2005, Biochemistry 44:13949-13961) indicated the Glu C180 side chain to undergo a combination of a conformational change and protonation upon haem reduction. The contribution of haem bD propionate is less clear, however, a combination of 13C labelling of the haem propionates with redox-induced FTIR experiments (Mileni et al, 2005, Biochemistry 44:16718-16728) and MCCE calculations (Haas and Lancaster, 2004, Biophys J 87:4298-4315) support a change in protonation, possibly accompanied by a change in environment upon haem reduction. These experiments and their results strongly support the existence of the ‘E-pathway’ which is transiently open during the reduction of the haem groups and blocked in the oxidized state of the enzyme (Lancaster, 2002b, Biochim Biophys Acta 1565:215-231). All available crystal structures of the QFR, however, are those of the oxidized enzyme. Therefore, it is advantageous to perform simulations of various redox states of the enzyme to determine for instance, how the side-chain of Glu C180 and haem bD ring C propionate behave upon changes of the redox states of the haem groups and why is the ‘E-pathway’ blocked in the oxidized state of the enzyme. Although the distal haem ring C propionate and Glu C180 were identified as the most prominent components of the proton transfer pathway, it was not clear, on the basis of the structure, how proton transfer could occur between them. In addition, two constituents are not enough to span the membrane region and the additional participants in the proton transfer pathway must be identified. Since an atomistic investigation of proton transfer in this system is not yet possible experimentally, I used available theoretical methods such as classical molecular dynamics (MD) simulation (Alder and Wainwright, 1959, J Phys Chem 31:459-466; McCammon et al, 1977, Nature 267:585-590) and Q-HOP molecular dynamics (Q-HOP MD) simulation (Lill and Helms, 2001, J Chem Phys 115:7993-8005) to investigate the postulated mechanism of electron coupled proton transfer in QFR. MD simulations allowed us to move away from static difference pictures obtained from FTIR experiments and MCCE calculations. The advantage of the MD simulations over the experiments and the simulations performed so far is that the time-dependent properties could now be analyzed. The behaviour of various residues and their side-chains and any environmental changes may be directly observed during MD simulations. Although classical MD simulations cannot be used to study proton transfer reactions, they can provide information on formation of configurations that would allow either direct proton transfer between donor and acceptor residues or indirect proton transfer mediated by water molecules. To avoid the static protonation of residues which is inherent in classical MD simulations, Q-HOP MD simulations were performed which explicitly describe proton transfer reactions by allowing the change of the protonation state of residues ‘on the fly’. The structures obtained after classical molecular dynamics simulations ....
Material of the domestic fowl of appropriate ages, ranging from twelve hours' incubation to the adult bird, was prepared for the purpose of studying the production and development of the germ cells. The primordial germ cells arise in the extra-embryonic region anterior to the head fold in the region of the zone of junction during the primitive-streak stage. These germ cells migrate, through the blood stream, to the region of the future gonad, where they develop into the definitive germ plasm. There is no widespread degeneration of the primordial germ cells after their arrival in the gonadal region, nor is there any widespread transformation of somatic cells into definitive germ cells.
Sensilla styloconica are elongated microscopically conspicuous chemo-mechano receptors found exclusively at the tongue tip of many adult Lepidoptera. These unique proboscis sensilla were comparatively studied using the scanning electron microscope in 107 species of North American and tropical butterflies. Focus was on 76 species of North American Nymphalidae representing 45 genera and 11 subfamily groups, and 15 species of tropical Nymphalidae representing additional genera and subfamilies. Observations of adult nymphalid feeding behaviour and food preference for correlation with morphological characteristics were made largely in North America and substantially in the Neotropics, where bait traps were used in conjunction with aerial netting. The tongue tips of 16 additional species representing 5 more butterfly families were also examined for the presence and morphological characteristics of sensilla styloconica.
The ABC protein ABCE1, also called HP68 or RNase L inhibitor (RLI), is one of the most conserved proteins in evolution. It is universally expressed in eukaryotes and archaea, where ABCE1 is essential for life. ABCE1 plays a crucial role in translation initiation and ribosome biogenesis, however, the molecular mechanism of ABCE1 remains unclear. In addition to two ABC ATPase domains, ABCE1 contains a unique N-terminal region with eight conserved cysteines predicted to coordinate iron-sulfur (Fe-S) clusters. To analyze the function of ABCE1, the hyperthermophilic crenarchaeote Sulfolobus solfataricus was chosen as a model system. S. solfataricus ABCE1 was overexpressed homologously in S. solfataricus and heterologously in E. coli. Noteworthy, for tagged-protein production in S. solfataricus a novel expression system based on a virus shuttle vector was established. This is the first example for a successful overexpression and purification of isolated full-length ABCE1. For the first time it was shown that ABCE1 indeed bears biochemical properties of an ABC protein even though it has unique features. Remarkably, the nucleotide binding domains (NBDs) of ABCE1 bound ATP and AMP, but were functionally non-equivalent in ATP hydrolysis. Mutations of conserved residues in the second NBD led to a hyperactive ATPase, which implies an intramolecular mechanism of dimer formation. Truncation of the Fe-S cluster domains did not influence ATPase activity. The Fe-S clusters of ABCE1 were analyzed by biophysical and biochemical methods. As presented in this study, ABCE1 harbors two essential diamagnetic [4Fe-4S]2+ clusters, one ferredoxin-like cluster formed by cysteines at position 4/5/6/7 and one unique ABCE1 cluster formed by cysteines at position 1/2/3/8. ABCE1 was found to be associated with RNA after purification from S. solfataricus and bound ribosomal RNA in vitro. In addition, ABCE1 showed homo-oligomerization and appeared to form a hexameric complex of ~440 kDa, which was RNase sensitive. Archaeal ABCE1 associated with ribosomes, however, the unique Fe-S clusters of ABCE1 were not required for this interaction. Although archaeal ABCE1 assembled with ribosomes and ribosomal RNA, ABCE1 proved not to be essential for translation in S. solfataricus and did not interact with archaeal initiation factors. Nevertheless, the ABCE1 gene is one of the few genes conserved between archaea and eukaryotes and fulfills a universal task, which needs further characterization.
21 Hsfs belonging to classes A, B and C were identified in Arabidopsis following the sequencing of its genome. 1.) Cloning of full length and CTD chimeric constructs followed by transient reporter assays in tobacco protoplast using GUS fusion constructs of the promoters of Hsp17.4-CI, synthetic (HSE9) and APX2 showed Hsfs A1a, A1b, A1d, A1e, A2, A3 and A9 to be active. CTDs of Hsfs A7a, A7b and HsfC1 had activity but they showed poor DNA binding in reporter assays. Hsfs A1a, A1b, A1d, A1e, A2 and A3 were able to induce the expression of endogenous Hsps in tomato protoplasts. Interesting differences in promoter selectivity were observed for several Hsfs. 2.) RT-PCR and microarray analysis showed the Hsfs to be differentially expressed depending on tissue, abiotic and biotic stress, hormone and developmental s ge. Interesting patterns of coexpressed Hsfs were observed under different stresses and developmental stages. 3.) HsfA1b was found to be active on the plasmid borne PHsf:GUS reporters of Hsfs A1d, A2, A4a, A7b and B4 when tested in tobacco mesophyll protoplasts. Hsfs A1d, A2, A4a, A7b and B4 when tested in tobacco mesophyll protplasts. HsfA2 was inactive on PHsfA:GUS. HsfB1 showed repression of endogenous activity on several PHsf:GUS reporter constructs. 4.) The transcriptional regulation under heat stress and promoter organization of HsfA2 and FtSH4 (a metalloprotease gene oriented in a head to head fashion with HsfA2 in the Arabidopsis genome, sharing a common promoter region) was studied. The transcripts of FtSH4 and HsfA2 coaccumulated under heat stress. HsfA1b was active on PHsfA2:GUS and PFtSH4:GUS. Hsf binding sites on the intergenic region were determined using promoter deletion constructs in tobacco and Arabidopsis protoplasts. A bidirectional regulation of HsfA2 and FtSH4 by HsfA1b was observed in tobacco protoplast. 5.) Microarray analysis of a HsfA2 T-DNA insertion line vs. wild type Col-0 under heat stress conditions led to identification of a subset of target genes to be severely affected in the absence of HsfA2. Apart from several Hsps (heat stressproteins) and APX2 (Ascorbate peroxidase 2, oxidative stress scavenger), several other unknown genes are affected. APX2 was the most severely affected among them. HsfA2 was able to induce the transcription from its target gene promoters in fusion to GUS in transient reporter assays in tobacco protoplast. The HSE cluster to which HsfA2 binds on the APX2 promoter was also mapped by the same technique. The direct binding of HsfA2 to the promoter of selected target genes in the Arabidopsis genome was also demonstrated by chromatin immunoprecipitation studies.
An annotated list of Ecuadorian butterflies (Lepidoptera: Papilionidae, Pieridae, Nymphalidae)
(2001)
Among the 13 genera and over 100 species of halfbeaks, three genera - Dermogenys, Nomorhamizphus and Hemirlzainplzodon - are internally fertilized and viviparous. These genera belong to a more inclusive clade, the Zenarchopterinae, that also includes Zenarchopterus, inferred to be internally fertilized and to lay fertilized eggs, and the monotypic Tondaiziclzthys, also inferred to be internally fertilized. Whereas the Hemiramphidae are distributed worldwide, internally fertilized halfbeaks are restricted to Southeast Asia. Recent data from histological surveys of the gonads of both males ancl females as well as cmbryonic modifications associated with viviparity have been combined here with osteological characters in a phylogenetic analysis. Results indicate overwhelming support for a sister-group relationship between Henzirhamnphodon and (Derinogeizys + Nomorhamnphus). Monophyly of the Dermogenys + Nomorhamphus clade is also well supported. These results confirm earlier suggestions that Dermnogenys, as previously defined, is paraphyletic. Within tlle Dermogenys+Noinorhamnphus clade, two monophyletic clades are supported: one comprises ten species including four new species (Dermogenys bruneiensis, Dermogenys robertsi, Dermogenys palawanensis and Dermogenys collettei) and the other comprises 13 species including three undescribed species (Nomorhamphus rossi, Nomorhamphus pinnimaculata and Nomorhainphus manifesta). Diagnoses for the species of Dermnogenys and Nomorhamnphus, as well as a natural classification for the included species, are presented.
Two distinct mechanisms contribute to the development of blood vessels: vasculogenesis, which is the de novo formation of vascular structures from progenitor cells, and angiogenesis, the formation of new blood vessels from pre-existing ones.
Angiogenesis is a highly ordered and carefully regulated multi-step process, during which the precise spatio-temporal interaction between endothelial and mural cells, i.e. smooth muscle cells and pericytes, is prerequisite for the formation of a functional blood vessel. The crosstalk between these two latter cell ty pes is mediated indirectly by various
secreted growth factors, and directly through cell-cell and cell-matrix interactions. The secretory epidermal growth factor-like protein 7 (EGFL7) has been implicated to
play an important role in the regulation of smooth muscle and endothelial cell recruitment and vascular tube formation. However, in-depth investigation of the underlying molecular mechanism has so far been hampered by the lack of functional recombinant EGFL7. In this study for the first time full length EGFL7 was successfully expressed as a His 6- tagged fusion protein from insect cells using the Baculovirus expression vector system. Recombinant EGFL7 was purified in a two-step protocol involving ion metal affinity chromatography and gel filtration. Furthermore, recombinant EGFL7 was
purified from human embryonic kidney EBN A 293 cells using a similar approach, allowing the production of high amounts of recombinant EGFL7 protein in its native state, with proper post-translational processing and full biological activity. Detailed analysis of the post-translational processing of recombinant EGFL7 and EGFL7-mutants revealed extensive proteolytic processing by protein convertases both at the N- and the C-terminus, the latter being prerequisite for EGFL7 secretion. Furthermore, secreted EGFL7 protein was shown to bind to the extracellular matrix and the responsible heparin-binding domain of EGFL7 was mapped to its N-terminal
portion. Purified recombinant EGFL7 protein was tested for its functionality using cell migration assays, cell proliferation studies and in vivo matrigel studies in mice. In the
modified Boyden chamber migration assay, recombinant EGFL7 proteins inhibited PDGF-BB-induced smooth muscle cell migration. Moreover, recombinant EGLF7 proteins strongly inhibited PDGF-BB-induced proliferation of smooth muscle cells, while it did not affect VEGF induced proliferation of endothelial cells. When applied in the in vivo matrigel plug assay, EGFL7 proteins induced a strong pro-angiogenic response, comparable with that of VEGF on an equimolar basis. Moreover, EGFL7 expression was strongly induced in endothelial cells in response to VEGF stimulation. These novel findings demonstrate the important function of EGFL7 in angiogenesis and are well in line with previous results. They demonstrate a cell specific action of EGFL7 on the different cell types involved in vessel formation, which is a prerequisite for a regulatory function in cell-to-cell crosstalk. Based on the results described here, the following model can be proposed: VEGF, a known strong initiator of angiogenesis, induces endothelial cell proliferation and migration, allowing the
escape from the comparatively rigid structure of a functional vessel to form an angiogenic sprout. At the same time VEGF induces the expression of EGFL7 in endothelial cells. EGFL7 is expressed, proc essed and secreted from these cells. While EGFL7 has no known effect on endothelial cells, it inhibits smooth muscle cell proliferation and migration, providing a mechanism to prevent pre-mature stabilization of the forming vessel. The availability of purified recombinant EGFL7 will be helpful in the detailed characterization of the underlying molecular mechanism of EGFL7 action, including the identification of the putative EGFL7 receptor, and will allow - together with knock-out experiments in mice - the exploration of the additional biological functions of EGFL7. Moreover, considering the strong pro-angiogenic effect of EGFL7 in vivo, it would be also of a great therapeutic interest to investigate its role in the development of tumor vasculature. The insights into these molecular mechanisms might provide a novel approach for the development of anti tumor therapies.
Cytochrome b561 (cyt b561) proteins are members of the recently identified eukaryotic ascorbate reducible protein family named CYBASC (CYtochrome B, ASCorbate reducible). CYBASC proteins are di-heme-b-containing membrane proteins that catalyze the transmembrane electron transfer from ascorbate. The function of the CYBASC proteins has been correlated with ascorbate recycling and/or iron facilitation uptake. Therefore, investigations on this family are of great interest as ascorbate is one of the most powerful antioxidants and iron is essential for cell survival both in animals and plants. As the amino acid sequence conservation of animal and plant CYBASC proteins is relatively high, all CYBASC members are proposed to share the same structural motifs. However, no three-dimensional structure of any representative member of the CYBASC family has been determined to date. In the Arabidopsis thaliana (A. thaliana) genome, two complete putative CYBASC open reading frames (ORFs), artb561-a and artb561-b were identified. In this thesis, these two A. thaliana CYBASC ORFs, encoding for Acytb561-A and Acytb561-B proteins respectively, were investigated and obtained main results are listed. 1. A. thaliana CYBASC proteins were heterologously produced in Pichia pastoris and Escherichia coli and purified by a single-step immobilized metal affinity chromatography (IMAC). To facilitate detection and purification, the recombinant A. thaliana CYBASC proteins were produced in both expression systems with the histidine affinity tag. Pure and stable preparations of the cytochromes were obtained via a single-step IMAC in sufficient amounts to perform biochemical characterizations. 2. Detergent solubilized recombinant Acytb561-A and Acytb561-B are dimers. As previously suggested for other CYBASC proteins, analytical gel filtration experiment suggested that both detergent solubilized cytochromes are dimers. 3. Spectroscopic features of Acytb561-B differed from those of previously described bovine chromaffin granule cyt b561. A distinctive feature of the first identified CYBASC protein, the cyt b561 from bovine chromaffin vesicles of adrenal medulla (Bcytb561-CG), is that its differential visible absorbance spectra (visible-spectra) revealed an asymmetric α-band with a maximum at 562 nm and a clear shoulder at 557 nm. This feature was recently used to discriminate CYBASC proteins from not-CYBASC proteins. However, in this thesis, it is shown for the first time that not all CYBASC proteins display in their reduced-minus-oxidized visible-spectra an asymmetric α- band and therefore, this feature can not be used as a discriminating CYBASC characteristic. 4. Ascorbate dependent reduction of the A. thaliana CYBASC proteins is inhibited by diethylpyrocarbonate (DEPC). As previously reported for the Bcytb561-CG, the ascorbatedependent reduction of the A. thaliana CYBASC proteins was inhibited by DEPC treatment. In addition, the ‘ascorbate protectant’ effect against DEPC that was observed on the Bcytb561-CG was also observed on the Acytb561-A and Acytb561-B proteins. Furthermore, as the physiological electron donor of all CYBASC proteins is supposed to be ascorbate, ascorbate-affinity of Acytb561- A and Acytb561-B was monitored and was found to be in the same range of the one of the Bcytb561- CG. 5. A. thaliana CYBASC proteins are Fe3+-chelate reductases. Recently, the Fe3+-chelate reductase activity of various CYBASC proteins was presented. In this thesis, it is shown that also both A. thaliana CYBASC proteins reduced Fe3+-chelates such as Fe3+-EDTA and Fe3+-citrate. Consistently, heme potentiometric reductive-oxidative titration of purified Acytb561-A and Acytb561-B indicated that the midpoint potential of the two heme centres of both cytochromes was lower than the one of those Fe3+-chelates. The values of both heme centre potentials of Acytb561-A and Acytb561-B are also consistent with the observation that both cytochromes were only partially reducible by ascorbate and were fully reduced with the non-physiological reductant Na-dithionite. In summary, this work describes the heterologous production, purification and initial characterizations of two distinct CYBASC proteins from A. thaliana: Acytb561-A and Acytb561-B. Biochemical characterization of these cytochromes showed that the shape of the α-band in the differential spectra is not a discriminating factor for CYBASC proteins but it is likely the DEPC sensitivity and the Fe3+-chelate reductase activity. Establishment of a purification strategy to obtain sufficient amounts of monodispersed and stable A. thaliana CYBASC proteins has also enabled initial screening of three dimensional crystallization conditions which are a prerequisite for a deeper understanding of this new eukaryotic redox enzyme family.
Ubiquitylation is a three-step process, which results in the attachment of the small protein ubiquitin (Ub) to lysine residues on a substrate protein. SUMO proteins are ubiquitin (Ub)-related modifiers implicated in the regulation of gene transcription, cell cycle, DNA repair and protein localization. The molecular mechanisms by which the sumoylation of target proteins regulates diverse cellular functions remain poorly understood. During my PhD I isolated and characterized SUMO1 and SUMO2 binding motifs. Using Yeast Two Hybrid system, bioinformatics and NMR spectroscopy we defined a common SUMO-interacting motif (SIM) and map its binding surfaces on SUMO1 and SUMO2. This motif forms a β-strand that could bind in parallel or anti-parallel orientation to the β2-strand of SUMO due to the environment of the hydrophobic core. A negative charge imposed by a stretch of neighboring acidic amino acids and/or phosphorylated serine residues determines its specificity in binding to distinct SUMO paralogues and can modulate the spatial orientation of SUMO-SIM interactions. Mutation of the SUMO interacting motif of TTRAP (TRAFS and TNF receptor associated protein) influences both its localization and dynamic behaviour in living cells. Ubiquitin (Ub)-binding domains (UBDs) are key elements in conveying Ub-based cellular signals. UBD-containing proteins interact with ubiquitylated targets and control numerous biological processes including receptor trafficking, DNA repair, virus budding and gene transcription. They themselves undergo UBD-dependent monoubiquitylation, which promotes intramolecular binding of the UBD to the attached Ub and consequently leads to their functional inhibition. During the second part of my PhD I could show that, in contrast to the established ubiquitylation pathway, the presence of UBDs allows the monoubiquitylation of host protein independently of classical E3 ligases. UBDs of different types including UBA, UIM, UBM, NFZ and UBZ, can directly cooperate with E2 Ub-conjugating enzymes to promote monoubiquitylation of their host proteins. Using FRET technology I verified that the E2 enzyme and the substrate directly interact in cells. Moreover, UBD-containing proteins Stam2 and Sts2 promote self-ubiquitylation and not ubiquitylation of other targets or form polyUb chains from free Ub. Our study revealed a yet unappreciated role of E2 enzymes in ubiquitylation reactions of UBD containing proteins.
A taxonomic review of the species belonging to Bembidion Latreille, 1802 of Australia includes a key and descriptions of the species. Noinenclatorial acts proposed in this paper include: 1, taxa of new Status - Bembidion subgenus Sloanephila Netolitzky, 1931, valid subgenus, not consubgeneric with subgenus Philochtus Stephens, 1828; B. (Notaphocampa) riverinae Sloane, 1894 valid species, not subspecies of B. opulentum Nietner, 1858; 2, new synonyms B. (Notaphominis Netolitzky, 1931) = B. (Notaphocampa Netolitzky, 1914): 3, New subgenera - Australoemphanes, and Gondwanabembidion, 4, New species - B. (Ananotaphus) daccordii (South Australia, Mound Springs); 5, new subspecies - B. (Zeactedium) orbiferum giachinoi (New ZeaIand, North Island); 6, species transferred to Australoemphanes - B . (Ananotaphus) blackburni Csiki, 1928; 7, Species transferred to Gondwanabembidion - B . (Ananotaphus) proprium Blackburn, 1888. Conclusions of an informal phylogeographic study are: 1, the Auslralian continent was probably populated by the Bembidiina with relatively recent (Late Tertiary-Quaternary) invasions from the north by tropical lineages, while other lineages showing systematic relationships with African and South American taxa probably have an older, Gondwanian origin; and 2, some lineagas of predominantly Nearctic and Palaearctic taxa were also Gondwanian in origin.
In this study we attempt to develop a synthesis of previously published work concerning the feeding habits of fourteen European freshwater fish: Anguilla anguilla L., Salmo trutta L., Rutilus rutilus L., Leuciscus leuciscus L ., Leuciscus cephalus L., Phoxinus phoxinus L., Gobio gobio L., Abramis brama L., Cyprinus carpio L., Tinca tinca L., Barbatula barbutula L., Gasterosteus aculeatus L., Perca fluviatilis L. and Cottus gobio L. Data presented in this paper were obtained frorn 98 studies in 16 European countries. Great Britain with 40 studies was the most documented country. In order to synthetize the maximurn information for each species, all methods used for analysing feeding habits and found in the different studies have been taken into account. Results are presented on tables with a commentary for each species analysed. The fourteen species were then classified into major trophic guilds.
There has been no attempt to produce a comprehensive review of peptide transport by micro-organisms for over ten years. Prior to that, several reviews presented a balanced description of transport and utilization of peptides by micro-organisms. From this nutritional standpoint, the essential, complementary role played by intracellular peptidases was also considered. In addition, attention was devoted to the particular opportunities conferred by peptide uptake compared with amino-acid transport, and to the advantages in possession of both types of systems. Overall, these reviews presented a largely phenomenological description of a developing research area (Payne, 1975, 1976, 1980d; Payne and Gilvarg, 1978; Matthews and Payne, 1980). The present review is restricted to consideration of the process of peptide transport in micro-organisms. Reflecting the main thrust of the intervening period, it concentrates on a molecular approach to the subject. Thus, it attempts to provide an integrated view of advances in understanding of the structures of transport components, their molecular mechanisms, synthesis and assembly, energetics and regulation. Application of this fundamental knowledge to exploitation of peptide permeases in the design of peptide-based antimicrobial compounds is also considered. Only when felt important for a balanced discussion is material covered in earlier reviews presented here. However, problems in adopting this approach need to be recognized. For, as G. K. Chesterton might have said, the disadvantage of not knowing the past is that you cannot fully understand the present.
Oribatei (Acari, Cryptostigmata) are found in a variety of terrestrial habitats, and many are associatcd with lichens; the relationship ranges from casual to highly dependent. Eighty-three species associatcd with lichens have been surveyed, and a tentative classification, based on their ecological requirements, is presented: Group A consists of species restricted to lichens as a biotope, though occasionally occurring as accidenials in other habitats, Group B consists of species which while preferring lichens as a habitat and feeding source are also adapted to existence on other piants (though in some cases their immatures may be lichen-rescricted); Group C consists of species which, though frequently found on lichens, are equally common in other biotopes, particularly mosses, and must be regartled as much more generalized in their feeding habits. Certain aspects of oribatid-lichen specificity are discussed. The importance of orihatid-lichen associations from tihe polnt of view of soil fertility and energetics is empliasized.
The genus Squamidium, a group of mosses with a tropical to subtropical American-African distribution, consists of two sections and seven species (prior to this study 27 species were recognized): sect. Squamidium (S. leucotrichum, S. livens, S. isocladum, S. nigricans, S. brasiliense) and sect. Macrosquamidium (S. macrocarpum and S. diversicoma). Twenty-four names are treated as syn. nov., three are provisionally excluded pending an examination of their types, and one new combination is made: Orthostichopsis pilotrichelloides (Sehnem) Allen & Crosby. Section Squamidium ist characterized by immersed capsules, stolon leaves with entire margins, and a relatively high basal membrane. Section Macrosquamidium is characterized by exserted capsules, stolon leaves with sharply recurved marginal teeth, and a relatively low basal membrane. The genus is retained in the Meteoriaceae. Within the Meteoriaceae Squamidium, is most closely related to Zelotmeteorium from which it differs only by its lack of squarrose-recurved leaves and its more well-developed alar cells. Squamidium, which in the absence of sporophytes has been confused consistently with Orthostichopsis, is separated from that genus on the basis of its lack of pseudoparaphyllia, weaker costae, lack of a distinct region of reddish cells across the leaf base, and strongly decurrent alar cells.