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Two new species of Strandesia Stuhlmann, 1888 are described from the northeastern part of Thailand: S. karanovicae sp. nov. and S. amnatcharoenensis sp. nov. Strandesia karanovicae is characterized by a tumid carapace in dorsal view, a small anterior overlap, the absence of a dorso-subapical seta on the first segment of the antennule (A1), a large aesthetasc Y on the antenna, an α seta shape with a needle-like tip and a large β seta on the mandibular palp (Md-palp), serrated bristles on the maxilla, a long h1 seta on the second thoracopod (T2) and a slender caudal ramus (CR). Strandesia amnatcharoenensis has a small compressed posterior part of the right valves (RV) which makes it closely related to S. pholpunthini Savatenalinton, 2015. The new species can be distinguished primarily by a considerably small anterior overlap of the left valve over the right valve (RV), a postero-ventral flange of the RV, a remarkably large claw Ga of the CR and the chaetotaxy of the limbs, especially A1, Md-palp and T2. In addition, in the present study, the sexual population of S. martensi Savatenalinton, 2015 is recorded for the first time, and thus the first description of the male is provided here. Moreover, the morphological examination of both males and females revealed differences between asexual and sexual females and also points to the fact that S. martensi is a mixed reproduction species. This is the first record of the mixed reproductive mode in the genus Strandesia or even in the Cypricercinae.
The snake pipefish, Entelurus aequoreus (Linnaeus, 1758), is a slender, up to 60 cm long, northern Atlantic fish that dwells in open seagrass habitats and has recently expanded its distribution range. The snake pipefish is part of the family Syngnathidae (seahorses and pipefish) that has undergone several characteristic morphological changes, such as loss of pelvic fins and elongated snout. Here, we present a highly contiguous, near chromosome-scale genome of the snake pipefish assembled as part of a university master’s course. The final assembly has a length of 1.6 Gbp in 7,391 scaffolds, a scaffold and contig N50 of 62.3 Mbp and 45.0 Mbp and L50 of 12 and 14, respectively. The largest 28 scaffolds (>21 Mbp) span 89.7% of the assembly length. A BUSCO completeness score of 94.1% and a mapping rate above 98% suggest a high assembly completeness. Repetitive elements cover 74.93% of the genome, one of the highest proportions so far identified in vertebrate genomes. Demographic modeling using the PSMC framework indicates a peak in effective population size (50 – 100 kya) during the last interglacial period and suggests that the species might largely benefit from warmer water conditions, as seen today. Our updated snake pipefish assembly forms an important foundation for further analysis of the morphological and molecular changes unique to the family Syngnathidae.
Highlights
• Genomes for all five Natrix species, two represented by two distinct subspecies each, were sequenced.
• Two genomes were de-novo assembled to their 1.7 Gb length with a contig N50 of 4.6 Mbp and 1.5 Mbp.
• Evidence for interspecific hybridization, both between allopatric and widely sympatric species.
• Fossil-calibrated molecular clock using genomes indicates that species are ancient several million-year-old lineages.
• Our findings imply that speciation took place despite continued gene flow.
Abstract
Understanding speciation is one of the cornerstones of biological diversity research. Currently, speciation is often understood as a continuous process of divergence that continues until genetic or other incompatibilities minimize or prevent interbreeding. The Palearctic snake genus Natrix is an ideal group to study speciation, as it comprises taxa representing distinct stages of the speciation process, ranging from widely interbreeding parapatric taxa through parapatric species with very limited gene flow in narrow hybrid zones to widely sympatric species. To understand the evolution of reproductive isolation through time, we have sequenced the genomes of all five species within this genus and two additional subspecies. We used both long-read and short-read methods to sequence and de-novo-assemble two high-quality genomes (Natrix h. helvetica, Natrix n. natrix) to their 1.7 Gb length with a contig N50 of 4.6 Mbp and 1.5 Mbp, respectively, and used these as references to assemble the remaining short-read-based genomes. Our phylogenomic analyses yielded a well-supported dated phylogeny and evidence for a surprisingly complex history of interspecific gene flow, including between widely sympatric species. Furthermore, evidence for gene flow was also found for currently allopatric species pairs. Genetic exchange among these well-defined, distinct, and several million-year-old reptile species emphasizes that speciation and maintenance of species distinctness can occur despite continued genetic exchange.
The genus Jambu gen. nov. is proposed based on two new species: Jambu paru gen. et sp. nov. and Jambu manoa gen. et sp. nov. Hapalopus butantan is transferred to Jambu; consequently, Jambu butantan gen. et comb. nov. is proposed. The geographic distribution of J. butantan is extended on the basis of new material collected. The new genus and the new species are here diagnosed, described and illustrated. The shape of the genitalia of Jambu resembles that of Hapalopini but differs from most of them by the presence of type IV urticating setae. The presence of this type of urticating setae allows us to hypothesize that this new genus is phylogenetically related with Grammostolini. Males of Jambu differ from those of other genera of Grammostolini by the presence of a paraembolic apophysis on the palpal bulb. Females also differ from those of other Grammostolini by the spermathecae morphology, with one medial lamp-shaped or heart-shaped receptacle. The homology of some features and the taxonomic placement of the new genus are discussed.
The ant genus Syscia Roger, 1861 is a cryptobiotic group of the subfamily Dorylinae. In this study, eight species of this genus from Asia are recognized, including two new species, Syscia arcodorsa sp. nov. and S. zhoui sp. nov., both described from Guangxi in China. In addition, Cerapachys guizhouensis Zhou, 2006 is redescribed and transferred to Syscia as S. guizhouensis (Zhou, 2006) comb. nov. The species Syscia typhla Roger, 1861 is removed from the ant fauna of China. Lastly, a key to species of Syscia from Asia based on the worker caste is presented.
Four new species of the jumping spider genus Stenaelurillus Simon, 1886 are described from India: Stenaelurillus feral Tripathi, Kuni & Kadam sp. nov. (♂, from the Eastern Coastline), S. naldurg Kuni, Kadam & Tripathi sp. nov. (♂♀, from the Deccan Plateau), S. judithbleisterae Kadam, Tripathi & Kuni sp. nov. (♂♀, from the Western Ghats) and S. solapur Kuni, Tripathi & Kadam sp. nov. (♂♀, from the Deccan Plateau). Detailed diagnoses, descriptions, illustrations, natural history and distribution map are provided. Additionally, new locality records for the other five species within the states are presented and mapped.
In this study, I describe two new species of Macrobiotus based on morphological data collected through light and scanning electron microscopy. Both species are accompanied by DNA sequences from four commonly used molecular markers (18S rDNA, 28S rDNA, ITS-2, and COI). Macrobiotus ovovittatus sp. nov. was discovered in Greenland and can be distinguished from similar taxa of Macrobiotus by its continuous, solid, and clearly wrinkled egg surface, adorned with sparse, very small and irregularly spaced pores. Additionally, the terminal discs of egg processes are covered in multiple light-refracting dots, resembling crocheted napkins. Macrobiotus mileri sp. nov. was found in Israel and is characterized by unique pore arrangements in its body cuticle, expressed in two distinct animal forms: (i) forma porata with large pores arranged in five distinct patches and (ii) forma aporata with single, almost undetectable pores. It also features weakly defined convex terminal discs with smooth edges. Furthermore, the phylogenetic analyses conducted in this study offer the most updated phylogeny of superclade I within the family Macrobiotidae. This facilitates additional discussion concerning the interrelationships among species within the genus Macrobiotus and the circumscription of species groups within it.
In the vast abyssal plains northwest of Iceland, white glass sponges of the genus Caulophacus Schulze, 1886 were inhabited by reddish Bythocaris G.O. Sars, 1870 shrimps and pinkish amphipods. After in situ observations at 3700 m depth, in -1°C waters by a remotely operated vehicle, members of this assemblage were collected and preserved for molecular studies. Based on integrative taxonomic analyses, the amphipods were identified as a new species of the genus Halirages Boeck, 1871 – Halirages spongiae sp. nov. Lörz, Nack & Tandberg –, as described in detail below. Part of our integrative approach was to establish reference DNA barcodes for known species of Halirages. However, our investigation of material of Calliopiidae G.O. Sars, 1895 collected around Iceland and Norway revealed slight morphological discrepancies in all the described species of Halirages. Except for Halirages fulvocinctus (M. Sars, 1858), none of the encountered specimens of Calliopiidae fully matched a current species description. We illuminate the morphological characteristics of nine operational taxonomic units, which also represented clades in COI and 28S. We set the Icelandic samples in the context of Halirages from Canada and Norway. A key to the world species of Halirages is provided.
Cicadellinae is a relatively large subfamily of leafhoppers (Hemiptera: Cicadellidae) with a cosmopolitan distribution with most genera known to occur in the Neotropics. Mexico houses nearly 16% of the total genera and most are endemic, inhabiting threatened native forests. Here, a new unusual Mexican genus, Christopherus gen. nov., is described to accommodate a new species of Cicadellini, C. mictlantecuhtli sp. nov., collected in the endangered Cloud Forest of Sierra Juárez, Oaxaca State of Mexico, based on dry-pinned museum specimen data. The new taxa can be separated from other Neotropical Cicadellini genera easily using male genitalia features: (i) pygofer without processes, (ii) segment 10th without processes, (iii) paraphysis absent, and (iv) edeagus with single basal atrial process elongate and asymmetrical. The monotypic genus Gillonella with its type species, G. ampulla Nielson & Godoy, 1995, are redescribed. A detailed extensive morphological description and discussion to distinguish the new genus from allied red-striped Neotropical genera in Mexico, Central America, and South America are given. Distributional data for new taxa within Mexican forests is also provided.
A re-analysis of the morphological phylogeny of the Nopinae is made, based on an update in the description of Aamunops Galán-Sánchez & Álvarez-Padilla, 2022 and the addition of the recently described genera Nopsma Sánchez-Ruiz, Brescovit & Bonaldo, 2020 and Roddemberryus Sánchez-Ruiz & Bonaldo, 2023. Two new species, Aamunops hoof sp. nov. (male) and Aamunops yiselae sp. nov. (male and female), are also described, which allows a better understanding of the genus morphology and resulted in an emended diagnosis. The description of Aamunops has been updated to include several characteristics of the ultrastructural morphology, legs, chelicerae, palps and female genitalia. The inclusion of these new characters of Aamunops along with those of Nopsma and Roddemberryus in the previous data matrix resulted in a new, completely different hypothesis of the relationships of the nopine genera: Nopsma is part of a group formed by Cubanops and Nyetnops, while Aamunops and Roddemberryus are grouped with representatives of Tarsonops. The four-eyed Nopsides ceralbonus Chamberlin, 1924 was recovered as the most basal species of Nopinae. The relationships among genera of Nopinae and the phylogenetic position of three species, whose taxonomic position is doubtful (Cubanops luquillo Sánchez-Ruiz, Brescovit & Alayón, 2015, Orthonops confuso Galán-Sánchez & Álvarez-Padilla, 2022 and Tarsonops irataylori Bond & Taylor, 2013), is also discussed.