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The outer segment of vertebrate photoreceptors is a specialized compartment that hosts all the signaling components required for visual transduction. Specific to rod photoreceptors is an unusual set of three glutamic acid-rich proteins (GARPs) as follows: two soluble forms, GARP1 and GARP2, and the N-terminal cytoplasmic domain (GARP′ part) of the B1 subunit of the cyclic GMP-gated channel. GARPs have been shown to interact with proteins at the rim of the disc membrane. Here we characterized native GARP1 and GARP2 purified from bovine rod photoreceptors. Amino acid sequence analysis of GARPs revealed structural features typical of “natively unfolded” proteins. By using biophysical techniques, including size-exclusion chromatography, dynamic light scattering, NMR spectroscopy, and circular dichroism, we showed that GARPs indeed exhibit a large degree of intrinsic disorder. Analytical ultracentrifugation and chemical cross-linking showed that GARPs exist in a monomer/multimer equilibrium. The results suggested that the function of GARP proteins is linked to their structural disorder. They may provide flexible spacers or linkers tethering the cyclic GMP-gated channel in the plasma membrane to peripherin at the disc rim to produce a stack of rings of these protein complexes along the long axis of the outer segment. GARP proteins could then provide the environment needed for protein interactions in the rim region of discs.
The D-meson spectral density at finite temperature is obtained within a self-consistent coupled-channel approach. For the bare meson–baryon interaction, a separable potential is taken, whose parameters are fixed by the position and width of the Λc(2593) resonance. The quasiparticle peak stays close to the free D-meson mass, indicating a small change in the effective mass for finite density and temperature. Furthermore, the spectral density develops a considerable width due to the coupled-channel structure. Our results indicate that the medium modifications for the D-mesons in nucleus-nucleus collisions at FAIR (GSI) will be dominantly on the width and not, as previously expected, on the mass.
We study the gluonic phase in a two-flavor color superconductor as a function of the ratio of the gap over the chemical potential mismatch, Δ/δμ. We find that the gluonic phase resolves the chromomagnetic instability encountered in a two-flavor color superconductor for Δ/δμ<2. We also calculate approximately the free energies of the gluonic phase and the single plane-wave LOFF phase and show that the former is favored over the latter for a wide range of coupling strengths.
We propose to use the hadron number fluctuations in the limited momentum regions to study the evolution of initial flows in high energy nuclear collisions. In this method by a proper preparation of a collision sample the projectile and target initial flows are marked in fluctuations in the number of colliding nucleons. We discuss three limiting cases of the evolution of flows, transparency, mixing and reflection, and present for them quantitative predictions obtained within several models. Finally, we apply the method to the NA49 results on fluctuations of the negatively charged hadron multiplicity in Pb+Pb interactions at 158A GeV and conclude that the data favor a hydrodynamical model with a significant degree of mixing of the initial flows at the early stage of collisions.
The QCD equation of state is not often discussed in cosmology. However, the relic density of
weakly interacting massive particles (WIMPs) depends on the entropy and the expansion rate of
the Universe when they freeze out, at a temperature in the range 400 MeV – 40GeV, where QCD
corrections are still important. We use recent analytic and lattice calculations of the QCD pressure
to produce a new equation of state suitable for use in relic density calculations. As an example,
we show that relic densities calculated by the dark matter package DarkSUSY receive corrections
of several per cent, within the observational accuracy of the Planck CMB mission, due for launch
in 2007.
A new experimental system has been set up with the ability to investigate catalytic processes and charge transfer of acrylonitrile on copper. For this purpose a new Time of Flight Mass Spectrometer to measure both the reaction outcome and electron energy distributions has been designed and tested. First experiments have been carried out, in which the width of the two-photon photoelectron energy distribution can be varied by changing the wavelength of the incident laser beam. This method allows high precision measurements of the work function and will be useful in the study with adsorbates, physi- or chemisorbed. In first adsorption measurements the excitation of vibrational modes of acrylonitrile has been seen to be consistent with earlier gas-phase experiments. Electron energy spectra taken with the electron analyzer with high resolution showed a clear defect in the electron yield at energies around the energy of one vibrational mode, indicating the possibility of resonant vibrational excitation by electron impact. More indications to that process were found i first electron spectra from the new TOF-MS, since a threshold for the capture probability is found at energies close to vibrational excitation. The threshold vanishes when the exposure is amplified significantly, indicating that electrons are scattered multiple and no resonance are be observed anymore. The experiments carried out were just the starting point in understanding the mechanism of the reaction. A new femtosecond laser system which is currently set up will give not only a time-resolved information on the reaction pathways but also give the possibility to create non-thermal electrons and to study intermediate states of the photoemission and the influence of the adsorbate on them. In addition the rotation of the electron analyzer will permit angle-resolved measurements of the scattering process of the electrons and the vibrational excitation via this pathway. With the new cooling system applied it will also be interesting to study the excitation process at lower temperatures. Below -160° C there are different geometries of the molecule predicted to be present at the surface. At these temperatures the thermal effects should play a major role, so that a thermal decoupling of the electrons is very desirable.
A new imaging method that combines high-efficiency fast-neutron detection with sub-ns time resolution is presented. This is achieved by exploiting the high neutron detection efficiency of a thick scintillator and the fast timing capability and flexibility of light-pulse detection with a dedicated image intensifier. The neutron converter is a plastic scintillator slab or, alternatively, a scintillating fibre screen. The scintillator is optically coupled to a pulse counting image intensifier which measures the 2-dimensional position coordinates and the Time-Of-Flight (TOF) of each detected neutron with an intrinsic time resolution of less than 1 ns. Large-area imaging devices with high count rate capability can be obtained by lateral segmentation of the optical readout channels.
The freeze out of the expanding systems, created in relativistic heavy ion collisions, is discussed. We combine kinetic freeze out equations with Bjorken type system expansion into a unified model. The important feature of the proposed scenario is that physical freeze out is completely finished in a finite time, which can be varied from 0 (freeze out hypersurface) to infinit. The dependence of the post freeze out distribution function on the freeze out time will be studied. Model allows analytical analyses for the simplest systems such as pion gas. We shall see that the basic freeze out features, pointed out in the earlier works, are not smeared out by the expansion of the system. The entropy evolution in such a scenario is also studied.
The elliptic flow for Lambda hyperons and K0s mesons was measured by the NA49 experiment in semicentral Pb+Pb collisions at 158A GeV. The standard method of correlating particles with an event plane has been used. Measurements of v2 near mid-rapidity are reported as a function of centrality, rapidity and transverse momentum. Elliptic flow of Lambda and K0s particles increases both with the impact parameter and with the transverse momentum. It is compared with v2 for pions and protons as well as with various model predictions. The NA49 results are compared with data from NA45/CERES and STAR experiments.
The effects of the onset of deconfinement on longitudinal and transverse flow are studied. First, we analyze longitudinal pion spectra from Elab = 2A GeV to √sNN = 200 GeV within Landau’s hydrodynamical model and the UrQMD transport approach. From the measured data on the widths of the pion rapidity spectra, we extract the sound velocity c2s in the early stage of the reactions. It is found that the sound velocity has a local minimum (indicating a softest point in the equation of state, EoS) at Ebeam = 30A GeV. This softening of the EoS is compatible with the assumption of the formation of a mixed phase at the onset of deconfinement. Furthermore, the energy excitation function of elliptic flow (v2) from Ebeam = 90A MeV to √sNN = 200 GeV is explored within the UrQMD framework and discussed in the context of the available data. The transverse flow should also be sensitive to changes in the equation of state. Therefore, the underestimation of elliptic flow by the UrQMD model calculation above Elab = 30A GeV might also be explained by assuming a phase transition from a hadron gas to the quark gluon plasma around this energy. This would be consistent with the model calculations, indicating a transition from hadronic matter to “string matter” in this energy range.