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(Non)retroflexivity of slavic affricates and its motivation : Evidence from polish and czech <č>
(2005)
The goal of this paper is two-fold. First, it revises the common assumption that the affricate <č> denotes /t͡ʃ/ for all Slavic languages. On the basis of experimental results it is shown that Slavic <č> stands for two sounds: /t͡ʃ/ as e.g. in Czech and /ʈʂ/ as in Polish.
The second goal of the paper is to show that this difference is not accidental but it is motivated by perceptual relations among sibilants. In Polish, /t͡ʃ/ changed to /ʈʂ/ thus lowering its sibilant tonality and creating a better perceptual distance to /tɕ/, whereas in Czech /t͡ʃ/ did not turn to /ʈʂ/, as the former displayed sufficient perceptual distance to the only affricate present in the inventory, namely, the alveolar /t͡s/. Finally, an analysis of Czech and Polish affricate inventories is offered.
Language planning for the Irish language in the Republic of Ireland has featured prominently in international language policy and planning literature over the years. Researchers in the field may not be up to date, however, with recent developments in the area of Irish language planning and their impact on the language ecology. This monograph describes the language planning situation in the Republic of Ireland in its historical and social contexts as well as delineating language policy and planning for the Irish language implemented over the past number of years, showing developments in education, community, media, religion and local politics.
The technique of site-specific fluorescence labelling with Tetramethylrhodaminemaleimide (TMRM) in combination with two electrode voltage-clamp technique (TEVC), an approach that has been named voltage clamp fluorometry (VCF), has been used in this work to study the Na,K-ATPase. The TMRM dye has the ability to attach covalently to cysteine residues and it responds to changes in the hydrophobicity of its local environment. We exploited this property using a construct of the Na-pump in which the native, extracellularly accessible cysteines were removed and cysteine residues were introduced by site-directed mutagenesis in specific positions of the Na-pump. In this way it was possible to detect site-specific conformational rearrangements of the Na-pump in a time-resolved fashion within a native membrane environment. In particular this technique allows to resolve reactions with low electrogenicity that cannot be satisfactorily analyzed with purely electrophysiological techniques and to identify the conformations of the enzyme under specific ionic composition of the measuring buffers. We used VCF to study the influence that several cations like Na+, K+, NMG+, TEA+ and BTEA+ exert on the distribution of the Na,K-ATPase between several enzymatic intermediates and on some of the reactions related to cation transport. To this end we utilized the mutants N790C in the loop M5-M6 and the mutant E307C, T309C, L311C and E312C in the loop M3-M4. From the correspondence of the fluorescence changes with the activation and inhibition of pumping current, by K+ and ouabain respectively, and from the fact that in Na+/Na+ exchange conditions the voltage distribution of charge movement and fluorescence changes evoked by voltage jumps are in reasonable agreement we conclude that through the fluorescence signals measured from these mutants, we can indeed monitor conformational changes linked to transport activity of the enzyme. For the mutants N790 and L311, it was found that the Na+ dependence of the amplitude and kinetics of the fluorescence signal associated with the E1P-E2P transition is in agreement with the prediction of an access channel model describing the regulation of the access of extracellular Na+ to its binding site. In particular for the mutants E307 and T309 it was found that in Na+/Na+ exchange conditions, the conformational change tracked by the fluorescence was much slower than the charge relaxation at hyperpolarized potentials while the kinetics was very similar at depolarized potentials. This implies that at hyperpolarized potentials the conformational change connected to the E1P-E2P transition does not give a large contribution to the electrogenicity of the process which is also consistent with the access channel model. On the mutant N790C it was found that the external pH does not seem to have any effect on the E1P-E2P equilibrium even if it seems to modulate the fluorescence quantum yield of the dye. Fluorescence quenching experiments with iodide and D2O indicate that at hyperpolarized potentials the local environment of the mutant N790C, experiences a small change in the accessibility to water without major changes in the local electrostatic field ...
The cumulant method is applied to study elliptic flow (v_2) in Au+Au collisions at sqrt s=200 AGeV, with the UrQMD model. In this approach, the true event plane is known and both the non-flow effects and event-by-event spatial (epsilon) and v_2 fluctuations exist. Qualitatively, the hierarchy of v_2 's from two, four and six-particle cumulants is consistent with the STAR data, however, the magnitude of v_2 in the UrQMD model is only 60% of the data. We find that the four and six-particle cumulants are good measures of the real elliptic flow over a wide range of centralities except for the most central and very peripheral events. There the cumulant method is affected by the v_2 fluctuations. In mid-central collisions, the four and six-particle cumulants are shown to give a good estimation of the true differential v_2, especially at large transverse momentum, where the two-particle cumulant method is heavily affected by the non-flow effects.
The Na+/proline transporter of E. Coli (PutP) is responsible for the uptake of proline which is subsequently used not only as a carbon and nitrogen source and a constituent of proteins but also as a particularly effective osmoprotectant. However, for a long time there was little known about the single steps in the reaction cycle of this transporter and only few details about its structure-function relationship are available. Aim of the present work was to achieve a deeper understanding about the kinetic properties of the Na+/proline transporter and to get insights into the structure-function relationship of the substrate binding. To answer these questions different techniques were used. By using the novel SSM technique combining the preparation of PutP proteoliposomes it was possible to demonstrate for the first time the electrogenic substrate binding to PutP transporter. Due to rapid solution exchange measurements on the SSM it was additionally possible to obtain time resolved information about the kinetic details of the cytoplasmic substrate binding sites which were not available by previous steady state and equilibrium binding measurements. Pre-steady-state charge translocation was observed after rapid addition of one or both of the cosubstrates Na+ and/or proline to the PutP-WT proteoliposomes adsorbed on the SSM. Thereby it was possible to link the observed electrical signals with the binding activity of PutP. The observed Na+ and/or proline induced charge displacement were assigned to an electrogenic Na+ and/or proline binding process at the cytoplasmic face of the enzyme with a rate constant of k > 50 s-1 proceeding the rate limiting step of the reaction cycle. Furthermore, based on the kinetic analysis of the electrical signals obtained from the measurements of PutP on SSM, the following characteristics of the substrates binding in PutP were deduced: (1) both Na+ and proline can bind individually to the transporter. Under physiological conditions, an ordered binding mechanism prevails; while at sufficiently high concentrations, each substrate can bind in the absence of the other; (2) substrate binding is electrogenic not only for Na+, but also for the uncharged cosubstrate proline. The charge displacement associated with Na+ binding and proline binding is of comparable size and independent of the presence of the respective cosubstrate. In addition, it was concluded that Na+ accesses its binding site through a high-field access channel resulting in a charge translocation, whereas the binding of the electroneutral proline induces a conformation alteration involving the displacement of charged amino acid residue(s) of the protein; (3) Na+ and proline binding sites interact cooperatively with each other by increasing the affinity and/or the speed of binding of the respective cosubstrate; (4) proline binding proceeds in a two step process: low affinity (~ 0.9 mM) electroneutral substrate binding followed by a nearly irreversible electrogenic conformational transition; (5) membrane impermeable PCMBS inhibits both Na+ and proline binding to the inside-out orientated PutP transporter, indicating that rather than selectively blocking a specific binding site, PCMBS probably locks the enzyme in an inactive state. The possible targets for this SH-reagent are cysteines 281 and 344 located close to the cytoplasmic surface of the protein. Beyond it, transient electrical currents of PutP were also observed on the BLM after rapid addition of proline in the presence of Na+. This was possible by combining the conventional BLM technique with high-speed flash-photolysis of caged-proline. Indeed the signals on the BLM indicate the detection of a different underlying reaction process in comparison to the data achieved by the SSM technique. This has paved the way for supplemental information about the reaction cycle since it was possible to assign the flash-photolysis BLM signals to the proline binding step followed by the internalization of Na+ and proline into the liposome. Thereby it was found, that the presence of Na+ is indispensable and the time constant for the process is ~ 63 ms. Moreover, structure-function information about the Na+ and proline binding sites of PutP was obtained by investigating the functionally important amino acid residues Asp55, Gly63 and Asp187 with site-directed mutagenesis and the combined SSM technique. One finding is that the mutated proteins PutP-D55C and PutP-G63C showed no activity on the SSM. Therefore, it can be assumed that either both Asp55 and Gly63 are crucial for the structure of PutP protein, or they are located at or close to the Na+ and proline binding sites. Furthermore, the results obtained from PutP-D187N and PutP-D187C mutants on SSM suggest that Asp187 of PutP is likely to be involved in the Na+ binding at the cytoplasmic side of the backward running carrier. Taken together the results of the present work have substantially broadened the known picture of the Na+/proline transporter PutP thereby several steps of the reaction cycle were elucidated, and moreover, valuable insights into the structure-function relationship of the transporter have become available.
Nucleotide-binding domains (NBDs), roughly 27 kDa in size, are conservative components of the large family of ABC (ATP-binding cassette) transporters, which includes importers, exporters, and receptors. NBDs or ABC-ATPases supply energy for the translocation of a vast variety of substrates across biological membranes. Despite their hydrophilic sequence, many NBDs tend to aggregate and precipitate in solution upon isolation from the complete transporter. The conditions stabilizing an extremely labile NBD component of the E.coli HlyA transporter, HlyB-NBD, were developed. As a result, the pure highly concentrated enzyme was protected from precipitation for months that allowed screening of the unlimited crystallization conditions in the presence of different substrates and performance of the reproducible functional assays. HlyB-NBD was characterized in regard to its uncoupled ATPase activity, oligomeric state, and stability in solution. Comparative analysis of protein stability and ATPase activity in various buffers suggested an inverse relationship between the two. Kinetic analysis of ATPase activity revealed ATP-induced protein dimerization. Gel-filtration experiments with the wild type protein and H662A-mutant of HlyB-NBD provided further evidence of protein dimerization in the presence of ATP. The crystal structures in post- and pre-hydrolysis nucleotide-bound states of HlyB-NBD were determined at 1.6Å and 2.5Å resolution, respectively. While the hydrolytically deficient H662A mutant of HlyB-NBD was crystallized as a stable dimer in the presence of ATP or ATP-Mg2+, with two nucleotide molecules sandwiched between the two monomers, the same protein was shown to be a monomer in the ADP-loaded state. The wild type protein failed to develop crystals with bound ATP, yet formed ADP-bound crystals identical to those of the H662A-mutant. The X-ray structures of HlyB-NBD in various states of the hydrolytic cycle and the functional studies of the enzyme have provided an opportunity to characterize enzyme-substrate complexes and protein-protein interactions between the NBD subunits in great detail. Comparison of the nucleotide-free, the ADP-, and the ATP-loaded states revealed oligomeric and conformational changes of the protein upon substrate binding and resulted in a molecular picture of the catalytic cycle. The correlated results of the structural and functional investigations of HlyB-NBD are discussed with relation to the mechanism of action of ABC transporters.
Prostaglandin E2 is the major prostaglandin involved in colorectal carcinogenesis. The biosynthesis of prostaglandin E2 is accomplished by several terminal prostaglandin E synthases through catalytical conversion of the cyclooxygenase product prostaglandin H2. Among the known terminal prostaglandin E synthases, microsomal prostaglandin E synthase type 1 and type 2 were found to be overexpressed in colorectal cancer, however the role and regulation of these enzymes in this tumor entity are yet not fully understood. Here we report that the cyclopentenone prostaglandins 15-deoxy-D12,14-prostaglandin J2 and prostaglandin A2, which have been shown to modulate cell growth and neoplasia, selectively down-regulate microsomal prostaglandin E synthase type 2 mRNA and protein expression in the human colorectal carcinoma cell lines Caco-2 and HCT 116. This effect appeared to be PPARgamma independent and was not found to require G-protein-coupled receptor activation. Instead, inhibition of microsomal prostaglandin E synthase type 2 by cyclopentenone prostaglandins may be mediated by covalent binding of the cyclopentenone ring to cysteine residues on signalling molecules or via a redox-dependent mechanism. Inhibition of microsomal prostaglandin E synthase type 2 was subsequently followed by decreased prostaglandin E synthase activity, which in turn contributed at least in part to the anti-proliferative action of cyclopentenone prostaglandins in HCT 116 cells. Collectively, these data unravel a novel mechanism for the growth-inhibitory effects of cyclopentenone prostaglandins and expose microsomal prostaglandin E synthase type 2 as a new potential target for pharmacological intervention in the treatment of colorectal cancer.
The J/psi-hadron interaction is a key ingredient in analyzing the J/psi suppression in hot hadronic matter as well as the propagation of J/psi in nuclei. As a first step to clarify the J/psi-hadron interactions at low energies, we have calculated J/psi-pi, J/psi-rho and J/psi-nucleon scattering lengths by the quenched lattice QCD simulations with Wilson fermions for beta=6.2 on 24^3*48 and 32^3*48 lattices. Using the Luscher's method to extract the scattering length from the simulations in a finite box, we find an attractive interaction in the S-wave channel for all three systems: Among others, the J/psi-nucleon interaction is most attractive. Possibility of the J/psi-nucleon bound state is also discussed.
Background: In general shell-less slugs are considered to be slimy animals with a rather dull appearance and a pest to garden plants. But marine slugs usually are beautifully coloured animals belonging to the less-known Opisthobranchia. They are characterized by a large array of interesting biological phenomena, usually related to foraging and/or defence. In this paper our knowledge of shell reduction, correlated with the evolution of different defensive and foraging strategies is reviewed, and new results on histology of different glandular systems are included. Results: Based on a phylogeny obtained by morphological and histological data, the parallel reduction of the shell within the different groups is outlined. Major food sources are given and glandular structures are described as possible defensive structures in the external epithelia, and as internal glands. Conclusion: According to phylogenetic analyses, the reduction of the shell correlates with the evolution of defensive strategies. Many different kinds of defence structures, like cleptocnides, mantle dermal formations (MDFs), and acid glands, are only present in shell-less slugs. In several cases, it is not clear whether the defensive devices were a prerequisite for the reduction of the shell, or reduction occurred before. Reduction of the shell and acquisition of different defensive structures had an implication on exploration of new food sources and therefore likely enhanced adaptive radiation of several groups. © 2005 Wägele and Klussmann-Kolb; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited: http://www.frontiersinzoology.com/content/2/1/3/
The paper considers optimal monetary stabilization policy in a forward-looking model, when the central bank recognizes that private-sector expectations need not be precisely model-consistent, and wishes to choose a policy that will be as good as possible in the case of any beliefs that are close enough to model-consistency. It is found that commitment continues to be important for optimal policy, that the optimal long-run inflation target is unaffected by the degree of potential distortion of beliefs, and that optimal policy is even more history-dependent than if rational expectations are assumed. JEL Classification: E52, E58, E42
The transporter associated with antigen processing (TAP)-like (TAPL, ABCB9) belongs to the ATP-binding cassette transporter family, which translocates a vast variety of solutes across membranes. The function of this half-size transporter has not yet been determined. Here, we show that TAPL forms a homodimeric complex, which translocates peptides across the membrane. Peptide transport strictly requires ATP hydrolysis. The transport follows Michaelis-Menten kinetics with low affinity and high capacity. Different nucleotides bind and energize the transport with a slight predilection for purine bases. The peptide specificity is very broad, ranging from 6-mer up to at least 59-mer peptides with a preference for 23-mers. Peptides are recognized via their backbone, including the free N and C termini as well as side chain interactions. Although related to TAP, TAPL is unique as far as its interaction partners, transport properties, and substrate specificities are concerned, thus excluding that TAPL is part of the peptide-loading complex in the classic route of antigen processing via major histocompatibility complex class I molecules.
The main subject of this survey are Belyi functions and dessins d'enfants on Riemann surfaces. Dessins are certain bipartite graphs on 2-mainfolds defining there are conformal and even an algebraic structure. In principle, all deeper properties of the resulting Riemann surfaces or algebraic curves should be encoded in these dessins, but the decoding turns out to be difficult and leads to many open problems. We emphasize arithmetical aspects like Galois actions, the relation to the ABC theorem in function filds and arithemtic questions in uniformization theory of algebraic curves defined over number fields.
In this paper, we present the Multiple Annotation approach, which solves two problems: the problem of annotating overlapping structures, and the problem that occurs when documents should be annotated according to different, possibly heterogeneous tag sets. This approach has many advantages: it is based on XML, the modeling of alternative annotations is possible, each level can be viewed separately, and new levels can be added at any time. The files can be regarded as an interrelated unit, with the text serving as the implicit link. Two representations of the information contained in the multiple files (one in Prolog and one in XML) are described. These representations serve as a base for several applications.
This paper presents the results of Open Quotient measurements in EGG signals of young (18 to 30 year old) and elderly (59 to 82 year old) male and female speakers. The paper further presents quantitative results on the relation between the OQ and the perception of a speaker's age. Higgins & Saxman (1991) found a decreased OQEGG with increasing age for females, whereas the OQEGG in sustained vowel material increased for males as the speakers age increased. In Linville (2002), however, the spectral amplitudes in the region of F0 (obtained by LTAS-measurements of read speech material) increased with increasing age independent of gender; this could be interpreted indirectly as an increasing OQ. We measured the OQEGG not only for sustained vowels, but also in vowels taken from isolated words. In order to analyse the relation between breathiness in terms of an increased OQ and the mean perceived age per stimulus a perception test was carried out in which listeners were asked to estimate speaker's age based on sustained /a/-vowel stimuli varying in vocal effort (soft - normal - loud) during production. The results indicated the following: (i) The decreased OQ for elderly females originally found by Higgins & Saxman is not apparent in our data for sustained /a/-vowels. For our female speakers no significant difference between the OQ of young and old speakers was found; for elderly males, however, we also found an increasing OQ with increasing age.(ii) In addition, a statistically significant increased OQEGG occurs for the group of the elderly males for the vowels from the word material. (iii) Our results show a strong positive relation between perceived age and OQ in male voices. Regarding (i) and (ii), at least the male speaker's voice becomes more breathy as age increases. Considering (iii), increased breathiness may contribute to the listener’s perception of increased age.
The thesis is a study of the Jewish community of Leipzig, Germany over the course of the 20 th century. It begins with an overview of the Jews of the city until the rise to power of Adolf Hitler, emphasizing divisions with the Jewish community over the ideology of Zionism and between German-born and foreign-born Jews. It goes on to describe the lives of Jews as the Nazis come to state authority, the riots of November, 1938, and the gradual exclusion of Jews from professional and pubic life in the city. Jewish responses in education, politics and culture are examined, as are the decisions of many local people to emigrate. After the 1938 riots, exclusion began to shift to extermination, and the Jewish community found itself subject to deportation to camps in Eastern Europe. Most of those deported were murdered. Those who lived were able to do so because of good fortune, canny survival skills, or marriage to non-Jews. Jewish life, which had been an important part of the city, was systematically destroyed. After 1945, those few who survived in the city were joined by another handful of Jewish Leipzigers who survived the camps, and by some non-Leipzig Jews, to reform the Jewish community. A tiny percentage of the old Jewish world of Leipzig was left to rebuild. They did so, reestablishing institutions, reclaiming property, and beginning negotiations with the new authorities, the Soviet occupation and then the German Democratic Republic. The Jews of Leipzig continued some of their old concerns in this new world, negotiating with the government and among themselves the nature of their identities as Jews and as Germans. These negotiations were brought to a halt by a series of anti-Semitic purges in 1952 and 1953. The leadership of the Jewish community fled, as did many of their fellow-Jews. The behavior of the East German state at this point showed some surprising commonality with their Nazi predecessors. After the purges were over, those who remained began another process of rebuilding, this time in constant tension with a government that wanted to use them for propaganda purposes during the Cold War. With the fall of the communist regime in 1989-90, the Jewish community of Leipzig was able to chart its destiny again. The old issues of identity and community--among themselves and between Jews and their German neighbors--continue in a very different context.
The exotic tree species Pinus radiata D. Don (in the family Pinaceae) has successfully spread from commercial plantations into adjacent vegetation in southeastern Australia. Identifying factors facilitating spread will aid the control of current invasions and the prediction of future invasion events. The structure and composition of vegetation can have an important role in determining community resilience to invasion. Two dry eucalypt sclerophyll woodlands in the Blue Mountains west of Sydney known to be invaded by Pinus radiata were surveyed to investigate the influence of eucalypt presence, species diversity, species composition and vegetation cover on the extent and density of invasion. Relationships between community characteristics and the level of pine invasion were weak and variable. Pines were found growing in plots with 0–70% understorey cover and 5–90% ground cover, and in areas of both high and low eucalypt diversity and presence, illustrating the high invasion potential of Pinus radiata.
This paper discusses constructions like “We’ll have two beers and a coffee.” that are typically used for beverage orders in restaurant contexts. We compare the behaviour of nouns in these constructions in three Germanic languages, English, Icelandic, and German, and take a closer look at the correlation of the morpho-syntactic and semantic-conceptual changes involved here. We show that even within such a closely related linguistic sample, one finds three different grammatical options for the expression of the same conceptual transition. Our findings suggest an analysis of coercion as a genuinely semantic phenomenon, a phenomenon that is located on a level of semantic representations that serves as an interface between the conceptual and the grammatical system and takes into account inter- and intralinguistic variations.
The Orchidaceae are one of the largest and most diverse families of flowering plants. Orchids grow as terrestrial, lithophytic, epiphytic or climbing herbs but most orchids native to the Sydney Region can be placed in one of two categories. The first consists of terrestrial, deciduous plants that live in fire-prone environments, die back seasonally to dormant underground root tubers, possess exclusively subterranean roots, which die off as the plants become dormant, and belong to the subfamily Orchidoideae. The second consists of epiphytic or lithophytic, evergreen plants that live in fire-free environments, either lack specialised storage structures or possess succulent stems or leaves that are unprotected from fire, possess aerial roots that grow over the surface of, or free of, the substrate, and which do not die off seasonally, and belong to the subfamily Epidendroideae.
Orchid seeds are numerous and tiny, lacking cotyledons and endosperm and containing minimal nutrient reserves. Although the seeds of some species can commence germination on their own, all rely on infection by mycorrhizal fungi, which may be species-specific, to grow beyond the earliest stages of development. Many epidendroid orchids are viable from an early stage without their mycorrhizal fungi but most orchidoid orchids rely, at least to some extent, on their mycorrhizal fungi throughout their lives. Some are completely parasitic on their fungi and have lost the ability to photosynthesize. Some orchids parasitize highly pathogenic mycorrhizal fungi and are thus indirectly parasitic on other plants.
Most orchids have specialised relationships with pollinating animals, with many species each pollinated by only one species of insect. Deceptive pollination systems, in which the plants provide no tangible reward to their pollinators, are common in the Orchidaceae. The most common form of deceit is food mimicry, while at least a few taxa mimic insect brood sites. At least six lineages of Australian orchids have independently evolved sexual deception. In this syndrome, a flower mimics the female of the pollinating insect species. Male insects are attracted to the flower and attempt to mate with it, and pollinate it in the process.
Little is known of most aspects of the population ecology of orchids native to the Sydney Region, especially their responses to fire. Such knowledge would be very useful in informing decisions in wildlife management.
Elke Kasimir´s paper (in this volume) argues against employing the notion of Givenness in the explanation of accent assignment. I will claim that the arguments against Givenness put forward by Kasimir are inconclusive because they beg the question of the role of Givenness. It is concluded that, more generally, arguments against Givenness as a diagnostic for information structural partitions should not be accepted offhand, since the notion of Givenness of discourse referents is (a) theoretically simple, (b) readily observable and quantifiable, and (c) bears cognitive significance.
FIFO is the most prominent queueing strategy due to its simplicity and the fact that it only works with local information. Its analysis within the adversarial queueing theory however has shown, that there are networks that are not stable under the FIFO protocol, even at arbitrarily low rate. On the other hand there are networks that are universally stable, i.e., they are stable under every greedy protocol at any rate r < 1. The question as to which networks are stable under the FIFO protocol arises naturally. We offer the first polynomial time algorithm for deciding FIFO stability and simple-path FIFO stability of a directed network, answering an open question posed in [1, 4]. It turns out, that there are networks, that are FIFO stable but not universally stable, hence FIFO is not a worst case protocol in this sense. Our characterization of FIFO stability is constructive and disproves an open characterization in [4].
We study queueing strategies in the adversarial queueing model. Rather than discussing individual prominent queueing strategies we tackle the issue on a general level and analyze classes of queueing strategies. We introduce the class of queueing strategies that base their preferences on knowledge of the entire graph, the path of the packet and its progress. This restriction only rules out time keeping information like a packet’s age or its current waiting time.
We show that all strategies without time stamping have exponential queue sizes, suggesting that time keeping is necessary to obtain subexponential performance bounds. We further introduce a new method to prove stability for strategies without time stamping and show how it can be used to completely characterize a large class of strategies as to their 1-stability and universal stability.
We study the effects of isovector-scalar meson delta on the equation of state (EOS) of neutron star matter in strong magnetic fields. The EOS of neutron-star matter and nucleon effective masses are calculated in the framework of Lagrangian field theory, which is solved within the mean-field approximation. From the numerical results one can find that the delta-field leads to a remarkable splitting of proton and neutron effective masses. The strength of delta-field decreases with the increasing of the magnetic field and is little at ultrastrong field. The proton effective mass is highly influenced by magnetic fields, while the effect of magnetic fields on the neutron effective mass is negligible. The EOS turns out to be stiffer at B < 10^15G but becomes softer at stronger magnetic field after including the delta-field. The AMM terms can affect the system merely at ultrastrong magnetic field(B > 10^19G). In the range of 10^15 G - 10^18 G the properties of neutron-star matter are found to be similar with those without magnetic fields.
The Dalai Lama, in exile since 1959 in Hindu majority India, has continuously been taking a firm stand on giving importance to an inter-religious dialogue and interaction. He has made it absolutely clear that Buddhism represents just one of the many religious ways open for mankind. Nonetheless, he has always referred to the bond shared between Buddhism and Hinduism as a very special one and has experienced it as a religious tie. Both these religious streams belong to what is known as Bharatiya or Indo-genous Dharma. The Dalai Lama does not restrict his care for nurturing this common bond to a mere academic talk. In fact he has been taking active part in promoting this kind of inter-religious dialogue and has been showing a fiery political commitment as well. He thus took active part in the second World Hindu Congress organized by the Vishwa Hindu Parishad held in Prayag-Allahabad in the year 1979. According to official reports, the organizers in their welcome speech for the Dalai Lama were frank enough to admit that 2500 years ago, the Kashi Pandits (Kashi also known as Varanasi) had stopped Siddharta Gautama Buddha from entering the Vishwanath temple. It was also mentioned that for all these years, there has never been any letup in the conflict between Sanatani Hindus and Bauddhas, despite the fact that later on Shakya Muni was rewarded the status of avatara by Hindus. The fact that these very Kashi Pandits had invite one of the highest religious authorities of Buddhism - the Dalai Lama- to this congress should be seen as "a positive step towards reconciliation." The Dalai Lama was thus pleasantly surprised to see that the highest rung of the religious body of Hindus publicly acknowledged the divine status of Siddharta Gautama Buddha and recognized the presence of the Dalai Lama as a valuable contribution towards the reconciliation between the two religious streams. ...
Highly sensitive qualitative and quantitative automatednucleic acid amplification tests (NATs) that are commercially available for the detection of hepatitis B virus (HBV)infection have been developed only in the last few years.The potential indications for HBV NATs are: follow-up ofchronic hepatitis B, therapy and antiviral resistance monitoring, determination of infectivity and transmission risk,detection of occult (HBsAg-negative and HBV DNA-positive) infection and mutant virus which may escape serologic diagnosis, blood donor screening, and resolution ofunusual or discordant serologic constellations. Although NATs are now widely implemented in the routine diagnosis of clinical laboratories, there are several importantissues which need to be further investigated. Standardisation of NATs used for the monitoring of antiviral therapyand follow-up of chronic infection is still lacking, and theclinical significance of HBV DNA levels needs to be clarified. The influence of genetic variability in terms of genotype variation has been poorly investigated so far.Although there are highly sensitive automated NATs forblood donor screening available, their implementation is still subject to discussion and certain countries rejectedHBV DNA testing for blood donation for reasons of poor cost-effectiveness.
Using a unique data set of regional inflation rates we are examining the extent and dynamics of inflation dispersion in major EMU countries before and after the introduction of the euro. For both periods, we find strong evidence in favor of mean reversion (ß-convergence) in inflation rates. However, half-lives to convergence are considerable and seem to have increased after 1999. The results indicate that the convergence process is nonlinear in the sense that its speed becomes smaller the further convergence has proceeded. An examination of the dynamics of overall inflation dispersion (ó-convergence) shows that there has been a decline in dispersion in the first half of the 1990s. For the second half of the 1990s, no further decline can be observed. At the end of the sample period, dispersion has even increased. The existence of large persistence in European inflation rates is confirmed when distribution dynamics methodology is applied. At the end of the paper we present evidence for the sustainability of the ECB's inflation target of an EMU-wide average inflation rate of less than but close to 2%. Klassifikation: E31, E52, E58
The map of “Regional natural forest composition by main tree species” (WALENTOWSKI et al. 2001) depicts Bavaria as a region largely predominated by the European beech (Fagus sylvatica). Analyses of climatope, hygrotope and trophotope of fir-dominated regional natural units make evident that the reasons for the preponderance of the European silver fir (Abies alba) are edaphic. In terms of regeneration vigour, growth and yield the fir particularly dominates in habitats with a combination of humus cover, acid-oligotrophic topsoils and clayey or waterlogged subsoils, where the beech usually exhibits stunted and malformed growth forms. This ecological preference has the effect that Bavarian Abies alba-forests are restricted to small patches within a matrix of potential natural vegetation formed by mixed deciduous-coniferous mountain forests. Within European Natura 2000 areas Abies- forests should be recorded carefully as special habitats. Their transitional character between temperate beech forests (habitat type 9130) and boreal spruce forests (habitat type 9410), the ecological preference of Abies alba as an endangered tree species and their sensitivity against environmental stressors, including changes in forest structure, air quality, and climate, make them important objects for nature conservation.
We present a numerical technique for calculating path integrals in non-compact U(1) and SU(2) gauge theories. The gauge fields are represented by a superposition of pseudoparticles of various types with their amplitudes and color orientations as degrees of freedom. Applied to Maxwell theory this technique results in a potential which is in excellent agreement with the Coulomb potential. For SU(2) Yang-Mills theory the same technique yields clear evidence of confinement. Varying the coupling constant exhibits the same scaling behavior for the string tension, the topological susceptibility and the critical temperature while their dimensionless ratios are similar to those obtained in lattice calculations.
IN A CASE STUDY IN THE GERMAN RETAIL BANKING BUSINESS IT IS SHOWN THAT ALIGNMENT BETWEEN IT AND BUSINESS UNIT IS CRUCIAL FOR THE ACTUAL USAGE OF IT SYSTEMS WHICH IN TURN IS A KEY DRIVER FOR BUSINESS PROCESS QUALITY. BANKS SHOULD THEREFORE FOSTER INTERRELATIONSHIPS BETWEEN IT AND BUSINESS AS WELL AS CROSS FUNCTIONAL WORK BIOGRAPHIES OF TEAM LEADERS
This paper describes the creation and preparation of TUSNELDA, a collection of corpus data built for linguistic research. This collection contains a number of linguistically annotated corpora which differ in various aspects such as language, text sorts / data types, encoded annotation levels, and linguistic theories underlying the annotation. The paper focuses on this variation on the one hand and the way how these heterogeneous data are integrated into one resource on the other hand.
The regeneration of hadronic resonances is discussed for heavy ion collisions at SPS and SIS-300 energies. The time evolutions of Delta, rho and phi resonances are investigated. Special emphasize is put on resonance regeneration after chemical freeze-out. The emission time spectra of experimentally detectable resonances are explored.
We predict transverse and longitudinal momentum spectra and yields of rho 0 and omega mesons reconstructed from hadron correlations in C+C reactions at 2~AGeV. The rapidity and pT distributions for reconstructable rho 0 mesons differs strongly from the primary distribution, while the omega's distributions are only weakly modified. We discuss the temporal and spatial distributions of the particles emitted in the hadron channel. Finally, we report on the mass shift of the rho 0 due to its coupling to the N*(1520), which is observable in both the di-lepton and pi pi channel. Our calculations can be tested with the Hades experiment at GSI, Darmstadt.
Chlorine monoxide (ClO) plays a key role in stratospheric ozone loss processes at midlatitudes. We present two balloonborne in situ measurements of ClO conducted in northern hemisphere midlatitudes during the period of the maximum of total inorganic chlorine loading in the atmosphere. Both ClO measurements were conducted on board the TRIPLE balloon payload, launched in November 1996 in Le´on, Spain, and in May 1999 in Aire sur l’Adour, France. For both flights a ClO daylight and night time vertical profile could be derived over an altitude range of approximately 15–31 km. ClO mixing ratios are compared to model simulations performed with the photochemical box model version of the Chemical Lagrangian Model of the Stratosphere (CLaMS). Simulations along 24-h backward trajectories were performed to study the diurnal variation of ClO in the midlatitude lower stratosphere. Model simulations for the flight launched in Aire sur l’Adour 1999 show a good agreement with the ClO measurements. For the flight launched in Le´on 1996, a similar good agreement is found, except at around ~ 650 K potential temperature (~26km altitude). However, a tendency is found that for solar zenith angles greater than 86°–87° the simulated ClO mixing ratios substantially overestimate measured ClO by approximately a factor of 2.5 or more for both flights. Therefore we conclude that no indication can be deduced from the presented ClO measurements that substantial uncertainties exist in midlatitude chlorine chemistry of the stratosphere. An exception is the situation at solar zenith angles greater than 86°–87° where model simulations substantial overestimate ClO observations.
Chlorine monoxide (ClO) plays a key role in stratospheric ozone loss processes at midlatitudes. We present two balloon-borne in situ measurements of ClO conducted in northern hemisphere midlatitudes during the period of the maximum of total inorganic chlorine loading in the atmosphere. Both ClO measurements were conducted on board the TRIPLE balloon payload, launched in November 1996 in León, Spain, and in May 1999 in Aire sur l'Adour, France. For both flights a ClO daylight and night-time vertical profile was derived over an altitude range of approximately 15-35 km. ClO mixing ratios are compared to model simulations performed with the photochemical box model version of the Chemical Lagrangian Model of the Stratosphere (CLaMS). Simulations along 24-hour backward trajectories were performed to study the diurnal variation of ClO in the midlatitude lower stratosphere. Model simulations for the flight launched in Aire sur l'Adour 1999 show an excellent agreement with the ClO measurements. For the flight launched in León 1996, an overall good agreement is found, whereas the flight is characterized by a more complex dynamical situation due to a possible mixture of vortex and non-vortex air. We note that for both flights at solar zenith angles greater than 86°-87° simulated ClO mixing ratios are higher than observed ClO mixing ratios. However, the present findings indicate that no substantial uncertainties exist in midlatitude chlorine chemistry of the stratosphere.
My graduate thesis is on the "Structural studies of membrane transport proteins". Transporters are membrane proteins that have multiple membrane-spanning a-helices. They are dynamic and diverse proteins, undergoing a large conformational change and transporting wide range of susbtrates. Based on their energy source they can be classified into primary and secondary transport systems. Primary transport systems are driven by the use of chemical (ATP) or light energy, while secondary transporters utilize ion gradients to transport substrates. I began my PhD dissertation on secondary transporters by two-dimensional crystallization and electron crystallographic analysis and recently my focus also has shifted towards 3D crystallization. The following projects constitute my PhD thesis: 1) 2D crystallization of MjNhaP1 and pH induced structural change: MjNhaP1, a Na+/H+ antiporter that is regulated by pH has been implicated in homeostasis of H+ and Na+ in Methanococcus jannaschii, a hyperthermophilic archaeon that grows optimally at 85°C. MjNhaP1 was cloned and expressed in E. coli. Two-dimensional crystals were obtained from purified protein at pH4. Electron cryo-microscopy yielded an 8Å projection map. The map of MjNhaP1 shows elongated densities in the centre of the dimer and a cluster of density peaks on either side of the dimer core, indicative of a bundle of 4-6 membrane-spanning helices. The effect of pH on the structure of MjNhaP1was studied in situ in 2D crystals revealing a major change in density within the helix bundle relative to the dimer interface. This change occurred at pH6 and above. The two conformations at low and high pH most likely represent the closed and open states of the antiporter, respectively. This is the first instance where a conformational change associated with the regulation of a secondary transporter appears to map structurally. Reconstruction of 3D map and high-resolution structure by x-ray crystallography would be necessary to understand the mechanism of ion transport and regulation by pH. 2) 2D crystallization of Proline transporter: Proline transporter (PutP) from E.coli belongs the sodium-solute symporter family that includes disease related sodium dependent glucose and iodide transporter in humans. Sodium and proline are co-transported with a stoichiometry of 1:1. Purified PutP was reconstituted to yield 2D crystals that were hexagonal in nature. The 2D crystals had tendency to stack indicating their willingness to form 3D crystals. A projection map of PutP from negatively stained crystals showed trimeric arrangement of protein. Other members of the SSF family have been shown to be monomers. My analysis of oligomeric state of PutP in detergent by blue native gel indicates a monomer in detergent solution. It is likely that PutP can function as a monomer but at higher concentration and in lipid bilayer it tends to form trimer. 3) Oligomeric state and crystallization of carnitine transporter from E.coli: E.coli carnitine transporter (CaiT) belongs to the BCCT (Betaine, Carnitine and Choline) superfamily that transports molecules with quaternary amine groups. CaiT is predicted to span the membrane 12 times and acts as a L-carnitine/g-butyrobetaine exchanger. Unlike other members in this transporter family, it does not require an ion gradient and does not respond to osmotic stress. Over-expression of the protein yielded ~2mg of protein/L of culture. The structure and oligomeric state of the protein were analyzed in detergent and lipid bilayers. Blue native gel electrophoresis indicated that CaiT was a trimer in detergent solution. Gel filtration and cross-linking studies further support this. Reconstitution of CaiT into lipid bilayers resulted in 2D crystals. Analysis of negatively stained 2D crystals confirmed that CaiT is a trimer in the membrane. Initial 3D crystallization trials have been successful and currently, the crystals diffract to 6Å and are being improved. 4) Monomeric porin OmpG: OmpG is a bacterial outer membrane b-barrel protein. It is monomeric and its size (33kDa) places it as a prime candidate for a structural solution, using the recently developed method of solid state NMR (work in collaboration with Prof.Hartmut Oskinat, FMP, Berlin). A long-term aim would be to study porins as templates for designing nanopores, for DNA sequencing and identification. I have expressed OmpG in inclusion bodies and refolded at an efficiency of >90% into a functional form using detergent. OmpG was then crystallized by 2D crystallization yielding an 8Å projection map whose structure was similar to native protein. In addition, these crystals were used for structure determination by solid state NMR. An initial spectrum of heavy isotopically labeled OmpG has allowed identification of specific amino acid residues including threonine and proline. Additionally, I obtained 3D crystals in detergent that diffract to 5.5Å and are being improved.
When a statistical parser is trained on one treebank, one usually tests it on another portion of the same treebank, partly due to the fact that a comparable annotation format is needed for testing. But the user of a parser may not be interested in parsing sentences from the same newspaper all over, or even wants syntactic annotations for a slightly different text type. Gildea (2001) for instance found that a parser trained on the WSJ portion of the Penn Treebank performs less well on the Brown corpus (the subset that is available in the PTB bracketing format) than a parser that has been trained only on the Brown corpus, although the latter one has only half as many sentences as the former. Additionally, a parser trained on both the WSJ and Brown corpora performs less well on the Brown corpus than on the WSJ one. This leads us to the following questions that we would like to address in this paper: - Is there a difference in usefulness of techniques that are used to improve parser performance between the same-corpus and the different-corpus case? - Are different types of parsers (rule-based and statistical) equally sensitive to corpus variation? To achieve this, we compared the quality of the parses of a hand-crafted constraint-based parser and a statistical PCFG-based parser that was trained on a treebank of German newspaper text.
The name Araecerus fasciculatus (DeGeer 1775) is resurrected for the coffee bean weevil, with the following synonyms: Bruchus cacao Fabricius 1775, Bruchus peregrinus Herbst 1797, Bruchus capsinicola Fabricius 1798, Anthribus coffeae Fabricius 1801, Amblycerus japonicus Thunberg 1815 (probably a synonym), Anthribus alternans Germar 1824, Phloeobius griseus of Stephens 1831, not Fabricius 1792, Cratoparis parvirostris Thomson 1858, Araecerus seminarius Chevrolat 1871, and Tropideres (Rhaphitropis) mateui Cobos 1954. Lectotypes are designated for A. fasciculatus, B. capsinicola, and A. alternans. A diagnosis distinguishes Araecerus from all 650 anthribid genera and a diagnosis for the species is as complete as possible with materials studied. Some additional species of Araecerus are discussed: Bruchus crassicornis Fabricius 1798 is distinguished from A. fasciculatus and a lectotype is designated. Araecerus suturalis Boheman 1839 is diagnosed and shown to be dissimilar from the species recently reported as A. suturalis from South Africa. The identity of Araecerus suturalis of Frieser, not Boheman, is not yet clear. Araecerus sambucinus Boisduval 1835 and Trepideres [sic] fragilis Walker 1859 may be synonyms of A. fasciculatus but pertinent data are insufficient. Brachytarsus niveovariegatus Roelofs 1879 (spelled nigrovariegatus by Bovie (1906)), listed as a synonym of A. fasciculatus by Wolfrurn (1929) is removed to Anthribus Forster 1770 with Anthribus lajievorus Chao 1976 as a new synonym.
Antibody library technology represents a powerful tool for the discovery and design of antibodies with high affinity and specificity for their targets. To extend the technique to the expression and selection of antibody libraries in an eukaryotic environment, we provide here a proof of concept that retroviruses can be engineered for the display and selection of variable single-chain fragment (scFv) libraries. A retroviral library displaying the repertoire obtained after a single round of selection of a human synthetic scFv phage display library on laminin was generated. For selection, antigen-bound virus was efficiently recovered by an overlay with cells permissive for infection. This approach allowed more than 10(3)-fold enrichment of antigen binders in a single selection cycle. After three selection cycles, several scFvs were recovered showing similar laminin-binding activities but improved expression levels in mammalian cells as compared with a laminin-specific scFv selected by the conventional phage display approach. Thus, translational problems that occur when phage-selected antibodies have to be transferred onto mammalian expression systems to exert their therapeutic potential can be avoided by the use of retroviral display libraries.
A world revision of the four entedonine (Hymenoptera: Eulophidae: Entedoninae) genera of larval parasitoids of thrips (Thysanoptera) is presented: Ceranisus Walker, 1841, Entedonomphale Girault, 1915 stat. rev. (reinstated as a valid taxon from previous synonymy under Ceranisus, with type species E. margiscutum Girault, 1915 stat. rev.), Goetheana Girault, 1920, and Thripobius Ferrière, 1938. The following new generic synonymies are proposed: Cryptomphale Girault, 1917, Entedonastichus Girault, 1920, Pirenoidea Girault, 1922, and Thripoctenoides Erdös, 1954 under Entedonomphale. The proposed new combinations are as follows: Entedonomphale bicolorata (Ishii, 1933), E. nubilipennis (Williams, 1916), and Thripobius javae (Girault, 1917) from Ceranisus; Entedonomphale carbonaria (Erdös, 1954), E. dei (Girault, 1922), E. kaulbarsi (Yoshimoto, 1981), and E. mira (Girault, 1920) from Entedonastichus. New synonymies are proposed for the following species: Ceranisus vinctus (Gahan, 1932) under Ceranisus menes (Walker, 1839), Diglyphus aculeo Walker, 1848 under Ceranisus pacuvius (Walker, 1838); Ceranisus maculatus (Waterston, 1930) and Thripobius semiluteus Boucek, 1976 under Thripobius javae (Girault, 1917); Entedonastichus albicoxis (Szelényi, 1982) under Entedonomphale carbonaria (Erdös, 1954), and Entedonastichus gaussi (Ferrière, 1958) under Entedonomphale bicolorata (Ishii, 1933). Eleven new species are described: Ceranisus barsoomensis and C. votetoda (Australia), C. udnamtak (Nepal); Entedonomphale boccaccioi (USA), E. esenini (Madagascar), E. lermontovi (South Africa), E. quasimodo and E. zakavyka (Australia); Goetheana pushkini (Japan and Republic of Korea) and G. rabelaisi (Australia); and Thripobius melikai (China). Three species are excluded from Ceranisus: C. ancylae (Girault, 1917) (mistakenly listed in Ceranisus) as well as C. nigricornis Motschulsky, 1863 and C. semitestaceus Motschulsky, 1863, both taxa incertae sedis. New data are provided on the distribution and host associations of many of the species included in this review.
The D-meson spectral density at finite temperature is obtained within a self-consistent coupled-channel approach. For the bare meson-baryon interaction, a separable potential is taken, whose parameters are fixed by the position and width of the Lambda_c (2593) resonance. The quasiparticle peak stays close to the free D-meson mass, indicating a small change in the effective mass for finite density and temperature. However, the considerable width of the spectral density implies physics beyond the quasiparticle approach. Our results indicate that the medium modifications for the D-mesons in nucleus-nucleus collisions at FAIR (GSI) will be dominantly on the width and not, as previously expected, on the mass.
The kaon nuclear optical potential is studied including the effect of the Θ+ pentaquark. The one-nucleon contribution is obtained using an extension of the Jülich meson-exchange potential as bare kaon–nucleon interaction. Significant differences between a fully self-consistent calculation and the usually employed low-density Tρ approach are observed. The influence of the one-nucleon absorption process, KN→Θ+, on the kaon optical potential is negligible due to the small width of the pentaquark. In contrast, the two-nucleon mechanism, KNN→Θ+N, estimated from the coupling of the pentaquark to a two-meson cloud, provides the required amount of additional kaon absorption to reconcile with data the systematically low K+-nucleus reaction cross sections found by the theoretical models.
A taxonomic review of the species belonging to Bembidion Latreille, 1802 of Australia includes a key and descriptions of the species. Noinenclatorial acts proposed in this paper include: 1, taxa of new Status - Bembidion subgenus Sloanephila Netolitzky, 1931, valid subgenus, not consubgeneric with subgenus Philochtus Stephens, 1828; B. (Notaphocampa) riverinae Sloane, 1894 valid species, not subspecies of B. opulentum Nietner, 1858; 2, new synonyms B. (Notaphominis Netolitzky, 1931) = B. (Notaphocampa Netolitzky, 1914): 3, New subgenera - Australoemphanes, and Gondwanabembidion, 4, New species - B. (Ananotaphus) daccordii (South Australia, Mound Springs); 5, new subspecies - B. (Zeactedium) orbiferum giachinoi (New ZeaIand, North Island); 6, species transferred to Australoemphanes - B . (Ananotaphus) blackburni Csiki, 1928; 7, Species transferred to Gondwanabembidion - B . (Ananotaphus) proprium Blackburn, 1888. Conclusions of an informal phylogeographic study are: 1, the Auslralian continent was probably populated by the Bembidiina with relatively recent (Late Tertiary-Quaternary) invasions from the north by tropical lineages, while other lineages showing systematic relationships with African and South American taxa probably have an older, Gondwanian origin; and 2, some lineagas of predominantly Nearctic and Palaearctic taxa were also Gondwanian in origin.
New distribution records for two species of Cryptolestes Ganglbauer (Coleoptera: Laemophloeidae)
(2005)
Theories of cognition that are based on information processing and representation are reactive (Rosen, 1985) or backwards looking, not anticipatory. In a previous article (Thibault, 2005a), I looked at the reasons why humans and bonobos do not need an innate language faculty in order to be minded, languaging beings. The present article takes up some of the questions explored there, but, it asks, on the other hand, what sort of a minded agent has language and what kind of account of language and more broadly meaning do we need to explain minded, languaged agents and the activities they participate in? Following Rosen (1985), I also take up and further develop a point first raised in Thibault (2004a: 187) on language as an anticipatory system, rather than a reactively ‘representational’ one (see also Bickhard, 2005).
Plenarvortrag Weltkongress der Rechtsphilosophie und Sozialphilosophie, 24.-29. Mai, Granada 2005. S.a. die deutsche Fassung: "Die anonyme Matrix: Menschenrechtsverletzungen durch "private" transnationale Akteure". Spanische Fassung: Sociedad global, justicia fragmentada: sobre la violatión de los derechos humanos por actores transnacionales 'privados'. In: Manuel Escamilla and Modesto Saavedra (eds.), Law and Justice in a global society, International Association for philosophy of law and social philosophy, Granada 2005, S. 547-562 und in "Anales de öa Catedra Francisco Suarez 2005". S.a. Teubner, Gunther: Globalized Justice - Fragmented Justice. Human Rights Violations by "Private" Transnational Actors
Dt. Fassung: Der Umgang mit Rechtsparadoxien: Derrida, Luhmann, Wiethölter. In: Christian Joerges und Gunther Teubner (Hg.) Rechtsverfassungsrecht: Recht-Fertigungen zwischen Sozialtheorie und Privatrechtsdogmatik. Nomos, Baden-Baden 2003, 249-272.
Globalized justice - fragmented justice. Human rights violations by "private" transnational actors
(2005)
Plenarvortrag Weltkongress der Rechtsphilosophie und Sozialphilosophie, 24.-29. Mai, Granada 2005. S.a. die deutsche Fassung: "Die anonyme Matrix: Menschenrechtsverletzungen durch "private" transnationale Akteure". Spanische Fassung: Sociedad global, justicia fragmentada: sobre la violatión de los derechos humanos por actores transnacionales 'privados'. In: Manuel Escamilla and Modesto Saavedra (eds.), Law and Justice in a global society, International Association for philosophy of law and social philosophy, Granada 2005, S. 529-546.
DCD – a novel plant specific domain in proteins involved in development and programmed cell death
(2005)
Background: Recognition of microbial pathogens by plants triggers the hypersensitive reaction, a common form of programmed cell death in plants. These dying cells generate signals that activate the plant immune system and alarm the neighboring cells as well as the whole plant to activate defense responses to limit the spread of the pathogen. The molecular mechanisms behind the hypersensitive reaction are largely unknown except for the recognition process of pathogens. We delineate the NRP-gene in soybean, which is specifically induced during this programmed cell death and contains a novel protein domain, which is commonly found in different plant proteins.
Results: The sequence analysis of the protein, encoded by the NRP-gene from soybean, led to the identification of a novel domain, which we named DCD, because it is found in plant proteins involved in d evelopment and c ell d eath. The domain is shared by several proteins in the Arabidopsis and the rice genomes, which otherwise show a different protein architecture. Biological studies indicate a role of these proteins in phytohormone response, embryo development and programmed cell by pathogens or ozone.
Conclusion: It is tempting to speculate, that the DCD domain mediates signaling in plant development and programmed cell death and could thus be used to identify interacting proteins to gain further molecular insights into these processes.
We present a system for the linguistic exploration and analysis of lexical cohesion in English texts. Using an electronic thesaurus-like resource, Princeton WordNet, and the Brown Corpus of English, we have implemented a process of annotating text with lexical chains and a graphical user interface for inspection of the annotated text. We describe the system and report on some sample linguistic analyses carried out using the combined thesaurus-corpus resource.
Experimente zum radiativen Elektroneneinfang (REC, Radiative Electron Capture), der Zeitumkehrung der Photoionisation, wie er in Stößen hochgeladener, relativistischer Schwerionen mit leichten Gasatomen auftritt, ermöglicht einen einzigartigen Zugang zum Studium der Photonen-Materie-Wechselwirkung im Bereich extrem starker Coulombfeldern. So ist die REC-Strahlung im relativistischen Bereich zum einen geprägt durch das Auftreten von höheren elektrischen und magnetischen Multipolordnungen und zum anderen durch starke Retardierungseffekte. In Folge dessen wurde der REC-Prozeß in den vergangen Jahren sehr detailliert untersucht, wobei sich die experimentelle und theoretische Forschung auf die Emissionscharakteristik der REC-Photonen konzentrierte, wie z.B. auf Untersuchungen von Winkelverteilungen und Linienprofilen. Mittlerweile kann der REC-Prozeß als ein - selbst für die schwersten Ionen - wohlverstandener Effekt angesehen werden. Allerdings entzog sich den Experimenten bislang eine zur Beschreibung der Photonenmission wesentlich Größe, näamlich die Polarisation der Strahlung. Die lineare Polarisation der REC-Strahlung, wie sie in Stößen zwischen leichten Atomen und den schwersten, hochgeladenen Ionen vorhergesagt wird, war der Gegenstand der vorliegende Arbeit, in der es erstmals gelang, die diese für den konkreten Fall des Einfangs in die K-Schale von nackten Uranionen nachzuweisen und im Detail zu untersuchen. Die hierzu notwendigen experimentellen Untersuchungen erfolgten am Speicherring ESR der GSI-Darmstadt für das Stoßsystem U92+ -> N2 und für Projektilenergien, die im Bereich zwischen 98 und 400 MeV/u lagen. Besonders hervorzuheben ist der Einsatz eines segmentierten Germaniumdetektors, der speziell für den Nachweis linear polarisierter Strahlung im Energiebereich oberhalb 100 keV entwickelte wurde. Die lineare Polarisation der Strahlung wurde hierbei durch eine Analyse der Comptonstreuung innerhalb des Detektors gewonnen. Die durch eine präzise Analyse der Comptonstreuverteilungen gewonnenen Daten zeigen eine ausgeprägte lineare Polarisierung der REC-Strahlung in der Streuebene, die zudem eine starke Abhängigkeit als Funktion der Stoßenergie und des Beobachtungwinkels aufweist. Der detaillierte Vergleich mit nicht-relativistischen und relativistischen Vorhersagen ermöglichte darüberhinaus den Nachweis für das Auftreten starker relativistischer Effekte, die sich allerdings depolarisierend auswirken. Das Experiment wurde am internen Target des ESR-Speicherrings durchgeführt, wobei der Photonennachweis mittels mehrerer Ge(i)-Detektoren erfolgte, die die Ionen-Target-Wechselwirkungszone unter Beobachtungswinkeln zwischen nahe Null und 150 Grad einsahen. Alle Photonendetektoren wurden in Koinizidenz mit einem Teilchendetektor betrieben, um so die volle Charakteristik des REC-Prozesses zu erfassen, also den Einfang eines Targetelektrons in die nackten Uranionen (U92+) unter Emission eines Photons. Für den Polarisationsnachweis entscheidend war der Einsatz eines Germanium-Pixel-Detektors, der abwechselnd unter den Winkeln von 60 und 90 Grad betrieben wurde. Dieser Detektor verfügt über eine 4x4 Pixelmatrix (Pixelgröße: 7x7 mm), wobei die elektronische Information jedes Pixels (Energiesignale und schnelle Zeitsignale) separat registriert und aufgezeichnet wurde. Hierdurch war es möglich Ereignisse, die koinzident in zwei Pixeln erfolgten, zu detektieren und zu analysieren. Dies ist die eigentliche Voraussetzung für den Nachweis der linearen Polarisation bei hohen Photonenenergien, bei dem die Abhängigkeit des differenziellen Wirkungsquerschnitts für Comptonstreuung von der linearen Polarisation der einfallenden Photonen ausgenutzt wird (siehe Klein-Nishina Formel Eq. 2.7). Der Nachweis der Comptonstreuung erfolgt hierbei durch die Detektion des Compton-Rückstoßelektrons (deltaE) und des gestreuten Comptonphotons (hw'), die jeweils separat, aber koinzident in zwei unterschiedlichen Segmenten des Detektors nachgewiesen werden. Hier sei betont, dass für Germanium bereits ab Photonenenergien von ca. 160 keV die Absorption der Strahlung durch den Compton-Effekt über die Photoabsorption dominiert und somit das Ausnutzen des Compton-Effekts prinzipiell eine sehr effektive Technik ist. Der Auswertung der Datenfkam wesentlich zugute, dass der Germanium-Detektor über eine im Vergleich zu Szintillations- oder Gaszählern gute Energieauflösung von ca. 1.8 keV bei 122 keV verfügt. Somit kann durch Bilden der Summenenergie hw = hw' + deltaE für koinzidente Ereignisse die Energie des einfallenden Photons (hw) rekonstruieren werden und als zwingende Bedingung dafür herangezogen werden, dass es sich bei dem Ereignis im Detektor um ein Compton-Event gehandelt hat. Für den Fall linearer Polarisation ist eine wesentliche Aussage der Klein-Nishina-Formel, dass die maximale Intensität für die Compton gestreuten Photonen senkrecht zur Polarisationsebene zu erwarten ist. Tatsächlich zeigen bereits die während des Experiments aufgenommenen Rohdaten für den Fall der untersuchten REC-Strahlung, die durch den Einfang in die K-Schale des Projektils entsteht, dass es sich hierbei um eine stark polarisierte Strahlung handelt, wobei eine erhöhte Intensität für Comptonstreuung senkrecht zur Stoßebene (für den REC-Prozeß definiert durch die Ionenstrahlachse und den Impuls des REC-Photons) festgestellt wurde (vgl. Fig. 7.3). Zur genauen qualitativen Analyse der Meßdaten wurden alle möglichen Pixelkombinationen der (4x4) Detektorgeometrie ausgewertet, wobei jedoch koinzidente Ereignisse benachbarter Segmente ausgeschlossen wurden, um den hier vorhandenenen Einfluß elektronischer Übersprecher zu eliminieren. Zudem erfolgte die Analyse der Daten unter Berücksichtigung verschiedenster Effekte, die einen Einfluß auf die Nachweiseffizienzen für die Compton gestreuten Photonen haben könnten. An prominenter Stelle ist hier die Korrektur zu nennen, die durch die Detektordicke von 1,5 cm und der Pixelgröße von 7x7 cm2 hervorgerufen wird. Zu betonen ist hier, dass für die Auswertung nur relative Effizienzen eine Rolle spielen und so der Einfluß systematischer Fehler, hervorgerufen durch Effizienzkorrekturen, stark reduziert werden konnte (für eine so gewonnene, vollständige Compton-Streuverteilung sei auf Abbildung 9.1 verwiesen, in der die Intensitätsverteilung für Compton-Streuung dargestellt ist). Es sei auch hervorgehoben, dass der Nachweis der Polarisation durch Messungen von vollständigen Compton-Intensitätverteilung im Detektor erfolgte, was das hier diskutierte Experiment wesentlich von konventionellen Polarisationsexperimenten für harte Röntgen- und gamma-Strahlung unterscheidet. Üblicherweise wird in diesen Experimenten die Comptonstreuung ausschließlich in der Reaktionsebene und senkrecht dazu nachgewiesen. Generell weisen die in der vorliegenden Arbeit gewonnen Compton-Streuverteilungen für den K-REC-Prozeß ein ausgeprägtes Maxium senkrecht zur Reaktionsebene auf und bestätigen somit den bereits aus den Rohdaten abgeleiteten Befund, dass die Polarisationsebene der KREC Strahlung in der Reaktionsebene des Stosses liegt. In der Tat kann dieser Befund für alle Energien und Beobachtungswinkel bestätigt werden, die in dem hier diskutierten Experiment verwendet wurden. Hier sei zudem darauf hingewiesen, dass es durch die Erfassung der vollständigen Compton-Streuverteilung möglich war, die Orientierung der Polarisationsebene in Bezug auf die Stoßebene mit hoher Präzision zu erfassen. So konnte z.B. bei der Stossenergie von 400 MeV/u und dem Winkel von 90 Grad, die Orientierung der Comptonstreuverteilung in Bezug auf die Stoßebene zu ph=90 Grad bestimmt werden. Dieser Befund könnte für die Planung zukünftiger Experimente zum Nachweis polarisierter Ionenstrahlen entscheidend sein, da eine Abweichung von der ph = 90 Grad Symmetrie nur durch das Vorhandensein polarisierter Teilchen erklärt werden kann. Dieser Effekt, der in neuesten theoretischen Behandlungen im Detail untersucht wurde, stellt gleichsam einen neuen Zugang zur Bestimmung des Polarisationsgrads der Projektile dar. Hierdurch wird die Stärke der hier angewandten Technik verdeutlicht, die auf dem Einsatz eines ortsempfindlichen Germanium-Pixel- Detektors beruht. Die Bestimmung des genauen Polarisationsgrades für die K-REC-Strahlung erfolgte durch eine X2-Anpassung der Klein-Nishina-Formel an die experimentellen Daten. Die hieraus resultierenden Daten zeigen für alle Strahlenergien und Beobachtungsgwinkel eine starke Polarisation von etwa 80%, wobei die experimentelle Unsicherheit im 10% Bereich liegt. Letztere ist im wesentlichen auf die statistische Genauigkeit zurückzuführen. Die Daten wurden zudem eingehend mit theoretischen Vorhersagen verglichen. Die Theorie stützt sich auf eine vollständige relativistische Beschreibung des REC-Prozesses unter Verwendung exakter Wellenfunktionen für das Kontinuum und den 1s Zustand in wasserstoffartigem Uran. Typischer weise mußten bei den Rechnungen sowohl elektrische wie auch magnetische Multipolterme bis hin zu L=20 verwendet werden, um Konvergenz zu erreichen. Der Vergleich zeigt eine hervorragende Übereinstimmung zwischen Experiment und Theorie. Zudem verdeutlicht der Vergleich mit der ebenfalls diskutierten Vorhersage der nicht-relativistischen Dipolnäherung die Bedeutung relativistischer Effekte (vor allem das Auftreten höherer elektrischer und magnetischer Multipole), die für die Emission der REC-Strahlung bei hohen, relativistischen Energien und hohem Z charakteristisch sind. Offensichtlich wirken sich diese Effekte stark depolarisierend aus. Dass in der Tat eine Zunahme der depolarisierenden Effekte mit einer Zunahme der Strahlenergie verbunden ist, wird auch durch die Daten dokumentiert, die für den Beobachtungswinkel von 60 Grad als Funktion des Projektilenergie untersucht wurden. Die in der vorliegenden Arbeit gewonnenen Resultate für die Polarisation der REC-Strahlung ebenso wie die neuartige Experimenttechnik, die hierbei zum Einsatz kam, lassen für die nahe Zukunft eine Serie von weiteren Polarisations-Experimenten erwarten. Hierbei könnte der REC-Strahlung und deren Polarisation als Mittel zur Diagnostik und zum Nachweis des Polarisationsgrades gespeicherter Ionenstrahlen eine Schlüsselrolle zukommen. Als Detektorsysteme werden hierzu zwei-dimensionale Germanium- und Silizium-Streifen-Detektoren zum Einsatz kommen bzw. Kombinationen aus zweidimensionalen Silizium- und Germanium-Detektoren, sogenannte Compton-Teleskope. Diese Compton-Polarimeter, die gegenwärtig für neue Experimentvorhaben am ESR-Speicherring entwickelt werden, verfügen über eine wesentlich verbesserte Ortsauflösung (z.B. 1x1 mm2) und somit über eine wesentlich gesteigerte Nachweiseffizienz für die Comptonstreuung (ein bis zwei Größenordnungen). Hierdurch sollte es möglich sein, den für Polarisationexerperimente zugänglichen Energiebereich wesentlich auszudehnen, sodass selbst die charakteristische Strahlung der Schwerionen (ca. 50 bis 100 keV) für solche Experimente zugänglich wird.
Group III presynaptic metabotropic glutamate receptors (mGluRs) play a central role in regulating presynaptic activity through G-protein effects on ion channels and signal transducing enzymes. Like all Class C G-protein coupled receptors, mGluR8 has an extended intracellular C-terminal domain (CTD) presumed to allow for modulation of downstream signaling. To elucidate the function and modulation of mGluR8, yeast two-hybrid screens of an adult rat brain cDNA library were performed with the CTDs of mGluR8a and 8b (mGluR8-C) as baits. Different components of the sumoylation cascade (ube2a, sumo-1, Pias1, Pias gamma and Pias xbeta) and some other proteins were identified as mGluR8 interacting proteins. Binding assays using recombinant GST-fusion proteins confirmed that Pias1 interacts not only with mGluR8-C, but all group III mGluR CTDs. Pias1 binding to mGluR8-C required a region N-terminally to a consensus sumoylation motif and was not affected by arginine substitution of the conserved lysine K882 within this motif. Co-transfection of fluorescently tagged mGluR8a-C, sumo-1 and enzymes of the sumoylation cascade into HEK 293 cells showed that mGluR8a-C can be sumoylated in cells. Arginine substitution of lysine K882 within the consensus sumoylation motif, but not of other conserved lysines within the CTD, abolished in vivo sumoylation. The results are consistent with post-translational sumoylation providing a novel mechanism of group III mGluR regulation.
In the year 2004 the ASFV celebrated its 50th anniversary holding a conference in Sulczyno, Kartuzy. This event offered the possibility to give an actual overview of forest resources and forest functions in Poland. The excursions of the meeting focused on the fascinating, diversified forest landscape formed by the Pomeranian phase of the Baltic glaciation. The Kartuzy Forest District is situated in the heart of the Kashubian Lakeland and the moraine hills. The landscape is not only characterized by the natural occurrence of Baltic beech forests but also by high diversity of soils and meso- and microclimatic de-viations providing habitats for rare plant species, including some plants typical of mountain regions. The tree species combination of the District is formed by pine, spruce, and beech. The oldest parts of the forests are legally protected as nature reserves.
In the classical Dirac equation with strong potentials, called overcritical, a bound state reaches the negative continuum. In QED the presence of a static overcritical external electric field leads to a charged vacuum and indicates spontaneous particle creation when the overcritical field is switched on. The goal of this work is to clarify whether this effect exists, i.e. if it can be uniquely defined and proved, in time-dependent physical processes. Starting from a fundamental level of the theory we check all mathematical and interpretational steps from the algebra of fields to the very effect. In the first, theoretical part of this thesis we introduce the mathematical formulation of the classical and quantized Dirac theory with their most important results. Using this language we define rigorously the notion of spontaneous particle creation in overcritical fields. First, we give a rigorous definition of resonances as poles of the resolvent or the Green's function and show how eigenvalues become resonances under Hamiltonian perturbations. In particular, we consider essential for overcritical potentials perturbation of eigenvalues at the edge of the continuous spectrum. Next, we gather various adiabatic theorems and discuss well-posedness of the scattering in the adiabatic limit. Then, we construct Fock space representations of the field algebra, study their equivalence and give a unitary implementer of all Bogoliubov transformations induced by unitary transformations of the one-particle Hilbert space as well as by the projector (or vacuum vector) changes as long as they lead to unitarily equivalent Fock representations. We implement in Fock space self-adjoint and unitary operators from the one-particle space, discussing the charge, energy, evolution and scattering operators. Then we introduce the notion of particles and several particle interpretations for time-dependent processes with a different Fock space at every instant of time. We study how the charge, energy and number of particles change in consequence of a change of representation or in implemented evolution or scattering processes, what is especially interesting in presence of overcritical potentials. Using this language we define rigorously the notion of spontaneous particle creation. Then we look for physical processes which show the effect of vacuum decay and spontaneous particle creation exclusively due to the overcriticality of the potential. We consider several processes with static as well as suddenly switched on (and off) static overcritical potentials and conclude that they are unsatisfactory for observation of the spontaneous particle creation. Next, we consider properties of general time-dependent scattering processes with continuous switch on (and off) of an overcritical potential and show that they also fail to produce stable signatures of the particle creation due to overcriticality. Further, we study and successfully define the spontaneous particle creation in adiabatic processes, where the spontaneous antiparticle is created as a result of a resonance (wave packet) decay in the negative continuum. Unfortunately, they lead to physically questionable pair production as the adiabatic limit is approached. Finally, we consider extension of these ideas to non-adiabatic processes involving overcritical potentials and argue that they are the best candidate for showing the spontaneous pair creation in physical processes. Demanding creation of the spontaneous antiparticle in the state corresponding to the overcritical resonance rather quick than slow processes should be considered, with a possibly long frozen overcritical period. In the second part of this thesis we concentrate on a class of spherically symmetric square well potentials with a time-dependent depth. First, we solve the Dirac equation and analyze the structure and behaviour of bound states and appearance of overcriticality. Then, by analytic continuation we find and discuss the behaviour of resonances in overcritical potentials. Next, we derive and solve numerically (introducing a non-uniform continuum discretization for a consistent treatment of narrow peaks) a system of differential equations (coupled channel equations) to calculate particle and antiparticle production spectra for various time-dependent processes including sudden, quick, slow switch on and off of a sub- and overcritical potentials. We discuss in detail how and under which conditions an overcritical resonance decays during the evolution giving rise to the spontaneous production of an antiparticle. We compare the antiparticle production spectrum with the shape of the resonance in the overcritical potential. We study processes, where the overcritical potentials are switched on at different speed and are possibly frozen in the overcritical phase. We prove, in agreement with conclusions of the theoretical part, that the peak (wave packet) in the negative continuum representing a dived bound state partially follows the moving resonance and partially decays at every stage of its evolution. This continuous decay is more intensive in slow processes, while in quick processes the wave packet more precisely follows the resonance. In the adiabatic limit, the whole decay occurs already at the edge of the continuum, resulting in production of antiparticles with vanishing momentum. In contrast, in quick switch on processes with delay in the overcritical phase, the spectrum of the created antiparticles agrees best with the shape of the resonance. Finally, we address the question how much information about the time-dependent potential can be reconstructed from the scattering data, represented by the particle production spectrum. We propose a simple approximation method (master equation) basing on an exponential, decoherent decay of time-dependent resonances for prediction of particle creation spectra and obtain a good agreement with the results of full numerical calculations. Additionally, we discuss various sources of errors introduced by the numerical discretization, find estimations for them and prove convergence of the numerical schemes.
A total of 73 species of tephritid flies has been recorded from Florida since the early 1800s. Of these, 7 species are considered to represent occasional waifs or accidental introductions from surrounding regions that are not known to have established populations in Florida; 6 are exotic pests which failed to colonize or were extirpated; and 7 species are represented only by early literature records and are considered dubious for the state. Thus, the tephritid fauna of Florida currently comprises a total of 53 species of which 1 species is precinctive to the state and considered to be endangered.
Results from various theoretical approaches and ideas presented at this exciting meeting (summary talk at the 5th International Conference on Physics and Astrophysics of Quark Gluon Plasma (ICPAQGP - 2005)) are reviewed. I also point towards future directions, in particular hydrodynamic behaviour induced by jets traveling through the quark-gluon plasma, which might be worth looking at in more detail.
In the last years, much effort went into the design of robust anaphor resolution algorithms. Many algorithms are based on antecedent filtering and preference strategies that are manually designed. Along a different line of research, corpus-based approaches have been investigated that employ machine-learning techniques for deriving strategies automatically. Since the knowledge-engineering effort for designing and optimizing the strategies is reduced, the latter approaches are considered particularly attractive. Since, however, the hand-coding of robust antecedent filtering strategies such as syntactic disjoint reference and agreement in person, number, and gender constitutes a once-for-all effort, the question arises whether at all they should be derived automatically. In this paper, it is investigated what might be gained by combining the best of two worlds: designing the universally valid antecedent filtering strategies manually, in a once-for-all fashion, and deriving the (potentially genre-specific) antecedent selection strategies automatically by applying machine-learning techniques. An anaphor resolution system ROSANA-ML, which follows this paradigm, is designed and implemented. Through a series of formal evaluations, it is shown that, while exhibiting additional advantages, ROSANAML reaches a performance level that compares with the performance of its manually designed ancestor ROSANA.
Specimen records for an adventive darkling beetle, Ceropria induta (Wiedemann) (Coleoptera: Tenebrionidae; Diaperinae) show that this Asian insect has become established in southern Florida, USA. Illustrations and a diagnosis of the beetle are provided, with notes on habitats and possible polyporaceous hosts, and the genus is incorporated into a key to the related North American taxa.
The strigatus group of the New World species of Ataenius Harold is revised. Seventeen species are recognized including two species described as new: Ataenius ecruensis sp. nov. from the United States and A. oaxacaensis sp. nov. from Mexico. Fifteen previously used names are considered valid, three new synonyms are proposed: A. liogaster Bates (= A. edwardsi Chapin syn. nov. = A. hoguei Cartwright and Spangler syn. nov.), A. wenzelii Horn (= A. rudellus Fall, syn. nov.). New state records are presented for A. spretulus (Haldeman) (Washington) and A. cognatus (LeConte) (Indiana, Missouri, and Mississippi). The taxa are diagnosed, keyed and illustrated; available biological information and distribution data are given.
Soluble guanylyl cyclase (sGC) is a cytosolic enzyme producing the intracellular messenger cyclic guanosine monophosphate (cGMP) on activation with nitric oxide (NO) which leads to the activation of GMP dependent protein kinases and to vasodilation. NO signaling may be affected by altered expression of sGC subunits, as has been shown in different pathological and physiological conditions and developmental stages. The molecular mechanisms underlying altered sGC expression in these and other conditions have not yet been revealed. Gene expression can also be regulated at the level of mRNA through alterations in translational efficiency and in mRNA stability. HuR (Human R) is a ubiquitously expressed member of the embryonic lethal abnormal vision (ELAV) family of RNA-binding proteins. Among other RNAs, there has been recent evidence that the expression of sGC is subject to post-transcriptional regulation by HuR. It has been shown that chronic hypertension induces changes in HuR expression and activity, which account for decreased sGC expression and activity in the aorta of hypertensive rats. This thesis should study was performed in an effort to provide some insight to the transcriptional and post-transcriptional regulation of sGC expression in a mammal, the rat. We investigated rat sGC alpha-1 transcriptional regulation in rat lung fibroblast (RLF-6) cells. The 3000bp 5' upstream region of the alpha-1 sGC gene was isolated and analyzed for promoter activity by using luciferase reporter constructs- Alpha3000 (with -2794 bp), Alpha1100 (-1092 bp), Alpha350 (-346 bp) and Alpha200 (-200 bp). The promoter activity was the highest in the 200bp construct (about 6-fold higher than Alpha3000) suggesting that this fragment contains all the crucial elements necessary to support basal transcription of the alpha-1 sGC gene. Analysis of the 200 bp of the 5’ UTR of the alpha-1 gene was performed using the MATINSPECTOR V2.2 software for putative transcription factors. The constructs containing the deleted sites for NFY and Sp1 showed a significant decrease in constitutive promoter activity by almost 80% and 60% respectively, implying that these transcription factors are crucial elements in the basal expression of the of sGC alpha-1 subunit. Treatment of RLF-6 cells with genistein 50 microM and mithramycinA 100 nM, known to inhibit the NFY and Sp1 binding to DNA respectively, reflected the same effects. Furthermore the cGMP content of the cells was significantly reduced by both inhibitors, almost completely by genistein, and by about 40 % by mithramycinA. Electrophoretic mobility-shift assay (EMSA) clearly showed the formation of multiple complexes with the biotinylated ODN (decoy oligodeoxynucleotide) probes for NFY and Sp1 when incubated with RLF-6 nuclear extract. A “supershift” observed in the presence of antibodies to the individual transcription factors confirmed that these factors were present in the shifted band, indeed. NFY and Sp1 are instrumental in several physiological and pathophysiological effects mediated by several growth factors in smooth muscle cells. Thus the regulation of the promoter, in response to serum, was also analysed. 10% foetal calf serum led to decreased alpha-1 sGC level as shown by western blots performed with rat aorta. Decreased sGC alpha-1 mRNA expression was observed in RLF-6 cells and cultured rat aortic smooth muscle cells incubated with FCS for 24 hours. This decrease was reflected in the promoter activity in RLF-6 cells using both Alpha3000 and Alpha200 constructs confirming that the regulation took place at promoter level. EMSA performed with nuclear extracts from FCS treated RLF-6 cells led to diminished binding to NFY, but to an enhanced binding to Sp1 site. We concluded that the factors Sp1 and NFY (the sites overlapping) compete for binding, and in the presence of FCS, it is Sp1 that binds stronger, and hence results in diminishing promoter activity. In order to delineate the post-transcriptional regulation of sGC alpha-1 subunit, studies were performed to demonstrate the regulation of expression of the mRNA stabilizing protein HuR. It has been observed that exposure of isolated rat aortic segments to the activator of adenylyl cyclase, forskolin, strongly reduced sGC alpha-1/beta-1 and HuR protein and mRNA expression in a time-dependent and actinomycin D-sensitive fashion. Transcription factor decoy approach proved that the cAMP-induced down-regulation of HuR is mediated by the activation of AP-1. It has been established that HuR stabilises the sGC alpha-1 and beta-1 mRNA. However the pathway underlying this regulation remains unknown. In order to identify the mechanism of this regulation, we looked for HuR interacting proteins employing the yeast two hybrid assay. The enzyme of the polyamine catabolic pathway spermidine/spermine N1-acetyltransferase (SSAT) was found to interact with the hinge region of HuR. This interaction was confirmed by performing immunoprecipitation and GST-pulldown experiments. A direct effect of these proteins on each other’s biological activity was not visible as tested through the SSAT activity assay and HuR gel shift. It might be possible that SSAT-mediated modulation of local polyamine concentrations enhances/reduces HuR activity and sGC expression to affect cell proliferation. In summary, this study represents an analysis of the rat sGC alpha-1 promoter regulation in rat fibroblast cells and identifies NFY and Sp1 as important factors in sGC alpha-1 expression. It also gives first evidence of sGC regulation at the transcriptional level in response to an external stimulus, and proposes the possible mechanism. It also identifies SSAT as a HuR interacting protein. These might have implications in the various pathophysiological conditions where sGC plays an important role.
In the present work, the Heidelberg electron beam ion trap (EBIT) at the Max-Planck-Institute für Kernphysik (MPIK) has been used to produce, trap highly charged argon ions and study their magnetic dipole (M1) forbidden transitions. These transitions are of relativistic origin and, hence, provide unique possibilities to perform precise studies of relativistic effects in many electron systems. In this way, the transitions energies of the 1s22s22p for the 2P3/2 - 2P1/2 transition in Ar13+ and the 1s22s2p for the 3P1 - 3P2 transition in Ar14+, for 36Ar and 40Ar isotopes were compared. The observed isotopic effect has confirmed the relativistic nuclear recoil effect corrections due to the finite nuclear mass in a recent calculation made by Tupitsyn [TSC03], in which major inconsistencies of earlier theoretical methods have been corrected for the first time. The finite mass, or recoil effect, composed of the normal mass shift (NMS), and the specific mass shift (SMS) were corrected for relativistic contributions, RNMS and RSMS. The present experimental results have shown that the recoil effects on the Breit level are indeed very important, as well as the effects of the correlated relativistic dynamics in a many electron ion.
Eighteen taxa are proposed as new synonyms in this study. Barbula calycina Schwägr. and Tortula ruraliformis (Besch.) Ingham are reported new for China. The types of Barbula pugionata Müll. Hal. and Streblotrichum gracillimum Herzog could not be located; comments on these two taxa are given. Barbula pugionata is considered as a questionable synonym of Syntrichia gemmascens (P.C. Chen) R.H. Zander. Streblotrichum gracillimum is Bellibarbula recurva (Griff.) R.H. Zander. Fruiting specimens of Didymodon giganteus (Funck) Jur., Didymodon leskeoides K. Saito and Didymodon subandreaeoides (Kindb.) R.H. Zander are reported from the Himalayas. Didymodon subandreaeoides and Bryoerythrophyllum rubrum (Geh.) P.C. Chen are reported new for Mongolia. Didymodon hastatus (Mitt.) R.H. Zander replaces Didymodon maschalogena (Renauld & Cardot) Broth. Barbula subcontorta Broth. is here viewed as Didymodon tectorum (Müll. Hal.) K. Saito: the latter is a distinct species.
This paper discusses the use of XSLT stylesheets as a filtering mechanism for refining the results of user queries on treebanks. The discussion is within the context of the TIGER treebank, the associated search engine and query language, but the general ideas can apply to any search engine for XML-encoded treebanks. It will be shown that important classes of linguistic phenomena can be accessed by applying relatively simple XSLT templates to the output of a query, effectively simulating the universal quantifier for a subset of the query language.
Background: Murine leukemia virus (MLV) vector particles can be pseudotyped with a truncated variant of the human immunodeficiency virus type 1 (HIV-1) envelope protein (Env) and selectively target gene transfer to human cells expressing both CD4 and an appropriate co-receptor. Vector transduction mimics the HIV-1 entry process and is therefore a safe tool to study HIV-1 entry. Results: Using FLY cells, which express the MLV gag and pol genes, we generated stable producer cell lines that express the HIV-1 envelope gene and a retroviral vector genome encoding the green fluorescent protein (GFP). The BH10 or 89.6 P HIV-1 Env was expressed from a bicistronic vector which allowed the rapid selection of stable cell lines. A codon-usage-optimized synthetic env gene permitted high, Rev-independent Env expression. Vectors generated by these producer cells displayed different sensitivity to entry inhibitors. Conclusion: These data illustrate that MLV/HIV-1 vectors are a valuable screening system for entry inhibitors or neutralizing antisera generated by vaccines.
The Land and Water Development Division of the Food and Agriculture Organization of the United Nations and the Johann Wolfgang Goethe University, Frankfurt am Main, Germany, are cooperating in the development of a global irrigation-mapping facility. This report describes an update of the Digital Global Map of Irrigated Areas for the continent of Asia. For this update, an inventory of subnational irrigation statistics for the continent was compiled. The reference year for the statistics is 2000. Adding up the irrigated areas per country as documented in the report gives a total of 188.5 million ha for the entire continent. The total number of subnational units used in the inventory is 4 428. In order to distribute the irrigation statistics per subnational unit, digital spatial data layers and printed maps were used. Irrigation maps were derived from project reports, irrigation subsector studies, and books related to irrigation and drainage. These maps were digitized and compared with satellite images of many regions. In areas without spatial information on irrigated areas, additional information was used to locate areas where irrigation is likely, such as land-cover and land-use maps that indicate agricultural areas or areas with crops that are usually grown under irrigation. Contents 1. Working Report I: Generation of a map of administrative units compatible with statistics used to update the Digital Global Map of Irrigated Areas in Asia 2. Working Report II: The inventory of subnational irrigation statistics for the Asian part of the Digital Global Map of Irrigated Areas 3. Working Report III: Geospatial information used to locate irrigated areas within the subnational units in the Asian part of the Digital Global Map of Irrigated Areas 4. Working Report IV: Update of the Digital Global Map of Irrigated Areas in Asia, Results Maps
A new version of a digital global map of irrigation areas was developed by combining irrigation statistics for 10825 sub-national statistical units and geo-spatial information on the location and extent of irrigation schemes. The map shows the percentage of each 5 arc minute by 5 arc minute cell that was equipped for irrigation around the year 2000. It is thus an important data set for global studies related to water and land use. This paper describes the data set and the mapping methodology and gives, for the first time, an estimate of the map quality at the scale of countries, world regions and the globe. Two indicators of map quality were developed for this purpose, and the map was compared to irrigated areas as derived from two remote sensing based global land cover inventories. We plan to further improve that data set; therefore comments, information and data that might contribute to that effort are highly welcome.
A new version of a digital global map of irrigation areas was developed by combining irrigation statistics for 10 825 sub-national statistical units and geo-spatial information on the location and extent of irrigation schemes. The map shows the percentage of each 5 arc minute by 5 arc minute cell that was equipped for irrigation around the year 2000. It is thus an important data set for global studies related to water and land use. This paper describes the data set and the mapping methodology and gives, for the first time, an estimate of the map quality at the scale of countries, world regions and the globe. Two indicators of map quality were developed for this purpose, and the map was compared to irrigated areas as derived from two remote sensing based global land cover inventories.
This paper provides global terrestrial surface balances of nitrogen (N) at a resolution of 0.5 by 0.5 degree for the years 1961, 1995 and 2050 as simulated by the model WaterGAP-N. The terms livestock N excretion (Nanm), synthetic N fertilizer (Nfert), atmospheric N deposition (Ndep) and biological N fixation (Nfix) are considered as input while N export by plant uptake (Nexp) and ammonia volatilization (Nvol) are taken into account as output terms. The different terms in the balance are compared to results of other global models and uncertainties are described. Total global surface N surplus increased from 161 Tg N yr-1 in 1961 to 230 Tg N yr-1 in 1995. Using assumptions for the scenario A1B of the Special Report on Emission Scenarios (SRES) of the International Panel on Climate Change (IPCC) as quantified by the IMAGE model, total global surface N surplus is estimated to be 229 Tg N yr-1 in 2050. However, the implementation of these scenario assumptions leads to negative surface balances in many agricultural areas on the globe, which indicates that the assumptions about N fertilizer use and crop production changes are not consistent. Recommendations are made on how to change the assumptions about N fertilizer use to receive a more consistent scenario, which would lead to higher N surpluses in 2050 as compared to 1995.
G protein-coupled receptors (GPCRs) play regulatory roles in many different physiological processes and they represent one of the most important class of drug targets. However, due to the lack of three-dimensional structures, structure based drug design has not been possible. The major bottleneck in getting three-dimensional crystal structure of GPCRs is to obtain milligram quantities of pure, homogenous and stable protein. Therefore, during my Ph.D. thesis, I focused on expression, characterization and isolation of three GPCRs namely human bradykinin receptor subtype 2 (B2R), human angiotensin II receptor subtype 1 (AT1aR), and human neuromedin U receptor subtype 2 (NmU2R). These receptors were heterologously produced in three different expression systems (i.e. Pichia pastoris, insect cells and mammalian cells), biochemically characterized and subsequently solubilized and purified for structural studies The human bradykinin receptor subtype 2 (B2R) is constitutively expressed in a variety of cells, including endothelial cells, vascular smooth muscle cells and cardiomyocytes. Activation of B2R is important in pathogenesis of inflammation, pain, tissue injury and cardioprotective mechanisms. During this study, recombinant B2R was produced in methylotrophic yeast Pichia pastoris (3.5 pmol/mg), insect cells (10 pmol/mg) and mammalian cells (60 pmol/mg). The recombinant receptor was characterized in terms of [3H] bradykinin binding, G protein coupling, localization, and glycosylation. Subsequently, it was solubilized and purified using affinity chromatography. Homogeneity and stability of purified B2R was monitored by gel filtration analysis. Milligram amounts of pure and stable receptor were obtained from BHK cells and Sf9 cells, which were used for three-dimensional crystallization attempts. The second receptor, which I worked on, is human angiotensin II receptor subtype 1 (AT1aR). AT1aR is distributed in smooth muscle cells, liver, kidney, heart, lung and testis. Activation of AT1aR is implicated in the regulation of blood pressure, hypertension and cardiovascular diseases. Recombinant AT1aR was produced at high levels in Pichia pastoris (167 pmol/mg), while at moderate levels in insect cells (29 pmol/mg) and mammalian cells (32 pmol/mg). The recombinant receptor was characterized in terms of [3H] angiotensin II binding, localization, and glycosylation. Subsequently, the receptor was solubilized and purified using affinity chromatography. Homogeneity and stability of purified AT1aR was monitored by gel filtration analysis. Milligram amounts of pure and stable receptor were obtained from Pichia pastoris, which were used for threedimensional crystallization attempts. In addition to B2R and AT1aR, I also attempted to produce and isolate the human neuromedin U receptor subtype 2 (NmU2R), which was deorphanized recently. It is found in highest abundance in the central nervous system, particularly the medulla oblongata, spinal cord and thalamus. The distribution of this receptor suggests its regulatory role in sensory transmission and modulation. During this study, recombinant NmU2R was produced in Pichia pastoris (6 pmol/mg) and BHK cells (9 pmol/mg). Recombinant receptor was characterized with regard to [125I] NmU binding, localization and glycosylation. Subsequently, the receptor was solubilized and purified using affinity chromatography. Due to its low expression level, further expression optimization is required in order to obtain milligram amounts for structural studies. The long-term goal of this study was to obtain three-dimensional crystal structure of recombinant GPCRs. However, 3-dimensional crystallization of human recombinant membrane proteins still remains a difficult task. On the other hand, recent advances in the solid-state NMR spectroscopy offer ample opportunities to study receptor-ligand systems, provided milligram quantities of purified receptor are available. Therefore, in parallel to 3-dimensional crystallization trials, purified B2R was also used for solid-state NMR analysis in order to investigate the receptor bound conformation of bradykinin. Preliminary results are promising and indicate significant structural changes in bradykinin upon binding to B2R. Further experiments are ongoing and will hopefully result in the structure of receptor bound bradykinin. One of the challenges in GPCR crystallization is the small hydrophilic surface area that is available to make crystal contacts. One possibility to overcome this problem can be the reconstitution of a GPCR complex with an interacting protein for cocrystallization. For this purpose, I coexpressed B2R and AT1aR, which form a stable heterodimer complex, in BHK cells. I could successfully isolate the heterodimer complex by using two-step affinity purification. Unfortunately, this complex was not stable over time and disassociates within three days of purification. However, during coexpression of B2R and AT1aR in BHK cells, I observed that B2R was localized in the plasma membrane in coexpressing cells while it was retained intracellularly when expressed alone. This coexpression of AT1aR with B2R resulted in a four-fold increase in [3H] bradykinin binding sites on the cell surface. In addition, these two receptors were cointernalized in response to their individual specific ligands. Interestingly, colocalization of B2R and AT1aR was also found in human foreskin fibroblasts (which endogenously express both receptors), in line with the possibility that heterodimerization may be required for surface localization of B2R in native tissues as well. This is the first report where surface localization of a peptide GPCR is triggered by a distantly related peptide GPCR. These data support the hypothesis that heterodimerization may be a prerequisite for cell surface localization of some GPCRs. A second approach that I followed to stabilize the purified B2R was to reconstitute the B2R-β-arrestin complex. β-arrestin is a cytosolic protein that participates in agonist mediated desensitization of GPCRs and therefore dampens the cellular responses initiated by the activation of GPCRs. I tried to reconstitute B2R-β-arrestin complex in vitro by mixing purified B2R and purified β-arrestin. But, no interaction of these two proteins was observed in the pull-down assays. However, a C-terminal mutant of B2R (where a part of the C-terminus of the B2R is exchanged with that of the vasopressin receptor) was found to interact with β-arrestin in vitro as revealed by pull-down assays. In conclusion, this work establishes the production, characterization and isolation of three recombinant human GPCRs. Recombinant receptors were produced in milligram amounts and therefore, pave the way for structural analysis. The heterodimer complex of B2R-AT1aR and B2R-β-arrestin complex can be of great help during crystallization. In addition, it was also found for the first time that the surface localization of a peptide GPCR can be triggered by heterodimerization with a distantly related peptide GPCR.
We consider Schwarz maps for triangles whose angles are rather general rational multiples of pi. Under which conditions can they have algebraic values at algebraic arguments? The answer is based mainly on considerations of complex multiplication of certain Prym varieties in Jacobians of hypergeometric curves. The paper can serve as an introduction to transcendence techniques for hypergeometric functions, but contains also new results and examples.
Particle production in central Pb+Pb collisions was studied with the NA49 large acceptance spectrometer at the CERN SPS at beam energies of 20, 30, 40, 80, and 158 GeV per nucleon. A change of the energy dependence is observed around 30A GeV for the yields of pions and strange particles as well as for the shapes of the transverse mass spectra. At present only a reaction scenario with onset of deconfinement is able to reproduce the measurements.
This paper describes the processing of MRI and CT images needed for developing a 3D linear articulatory model of velum. The 3D surface that defines each organ constitutive of the vocal and nasal tracts is extracted from MRI and CT images recorded on a subject uttering a corpus of artificially sustained French vowels and consonants. First, the 2D contours of the organs have been manually extracted from the corresponding images, expanded into 3D contours, and aligned in a common 3D coordinate system. Then, for each organ, a generic mesh has been chosen and fitted by elastic deformation to each of the 46 3D shapes of the corpus. This has finally resulted in a set of organ surfaces sampled with the same number of 3D vertices for each articulation, which is appropriate for Principal Component Analysis or linear decomposition. The analysis of these data has uncovered two main uncorrelated articulatory degrees of freedom for the velum's movement. The associated parameters are used to control the model. We have in particular investigated the question of a possible correlation between jaw / tongue and velum's movement and have not find more correlation than the one found in the corpus.
A fundamental question in the study of speech is about the invariance of the ultimate percepts, or features. The present paper gives an overview of the noninvariance problem and offers some hints towards a solution. Examination of various data on place and voicing perception suggests the following points. Features correspond to natural boundaries between sounds, which are included in the infant's predispositions for speech perception. Adult percepts arise from couplings and contextual interactions between features. Both couplings and interactions contribute to invariance. But this is at the expense of profound qualitative changes in perceptual boundaries implying that features are neither independently nor invariantly perceived. The question then is to understand the principles which guide feature couplings and interactions during perceptual development. The answer might reside in the fact that: (1) adult boundaries converge to a single point of the perceptual space, suggesting a context-free central reference; (2) this point corresponds to the neutral vocoïd, suggesting the reference is related to production; (3) at this point perceptual boundaries correspond to the natural ones, suggesting the reference is anchored in predispositions for feature perception. In sum, perceptual invariance seems to be grounded on a radial representation of the vocal tract around a singular point at which boundaries are context-fee, natural and coincide with the neutral vocoïd.
Despite a lot of re-structuring and many innovations in recent years, the securities transaction industry in the European Union is still a highly inefficient and inconsistently configured system for cross-border transactions. This paper analyzes the functions performed, the institutions involved and the parameters concerned that shape market and ownership structure in the industry. Of particular interest are microeconomic incentives of the main players that can be in contradiction to social welfare. We develop a framework and analyze three consistent systems for the securities transaction industry in the EU that offer superior efficiency than the current, inefficient arrangement. Some policy advice is given to select the 'best' system for the Single European Financial Market.
Academic contributions on the demutualization of stock exchanges so far have been predominantly devoted to social welfare issues, whereas there is scarce empirical literature referring to the impact of a governance change on the exchange itself. While there is consensus that the case for demutualization is predominantly driven by the need to improve the exchange's competitiveness in a changing business environment, it remains unclear how different governance regimes actually affect stock exchange performance. Some authors propose that a public listing is the best suited governance arrangement to improve an exchange's competitiveness. By employing a panel data set of 28 stock exchanges for the years 1999-2003 we seek to shed light on this topic by comparing the efficiency and productivity of exchanges with differing governance arrangements. For this purpose we calculate in a first step individual efficiency and productivity values via DEA. In a second step we regress the derived values against variables that - amongst others - map the institutional arrangement of the exchanges in order to determine efficiency and productivity differences between (1) mutuals (2) demutualized but customer-owned exchanges and (3) publicly listed and thus at least partly outsider-owned exchanges. We find evidence that demutualized exchanges exhibit higher technical efficiency than mutuals. However, they perform relatively poor as far as productivity growth is concerned. Furthermore, we find no evidence that publicly listed exchanges possess higher efficiency and productivity values than demutualized exchanges with a customer-dominated structure. We conclude that the merits of outside ownership lie possibly in other areas such as solving conflicts of interest between too heterogeneous members.
In recent years stock exchanges have been increasingly diversifying their operations into related business areas such as derivatives trading, post-trading services and software sales. This trend can be observed most notably among profit-oriented trading venues. While the pursuit for diversification is likely to be driven by the attractiveness of these investment opportunities, it is yet an open question whether certain integration activities are also efficient, both from a social welfare and from the exchanges' perspective. Academic contributions so far analyzed different business models primarily from the social welfare perspective, whereas there is only little literature considering their impact on the exchange itself. By employing a panel data set of 28 stock exchanges for the years 1999-2003 we seek to shed light on this topic by comparing the factor productivity of exchanges with different business models. Our findings suggest three conclusions: (1) Integration activity comes at the cost of increased operational complexity which in some cases outweigh the potential synergies between related activities and therefore leads to technical inefficiencies and lower productivity growth. (2) We find no evidence that vertical integration is more efficient and productive than other business models. This finding could contribute to the ongoing discussion about the merits of vertical integration from a social welfare perspective. (3) The existence of a strong in-house IT-competence seems to be beneficial to overcome.
The present study examines native and nonnative perceptual processing of semantic information conveyed by prosodic prominence. Five groups of German learners of English each listened to one of 5 experimental conditions. Three conditions differed in place of focus accent in the sentence and two conditions were with spliced stimuli. The experiment condition was presented first in the learners’ L1 (German) and then in a similar set in the L2 (English). The effect of the accent condition and of the length and position of the target in the sentence was evaluated in a probe recognition task. In both the L1 and L2 tasks there was no significant effect in any of the five focus conditions. Target position and target word length had an effect in the L1 task. Word length did not affect accuracy rates in the L2 task. For probe recognition in the L2, word length and the position of the target interacted with the focus condition.
Sodium proton antiporters are ubiquitous membrane proteins found in the cytoplasmic and organelle membranes of cells of many different origins, including plants, animals and microorganisms. They are involved in cell energetics, and play primary roles in the homeostasis of intracellular pH, cellular Na+ content and cell volume. Adaptation to high salinity and/or extreme pH in plants and bacteria or in human heart muscles requires the action of such Na+/H+ antiporters. NhaA is the essential Na+/H+ antiporter for pH and Na+ homeostasis (at alkaline pH) in Escherichia coli and many other enterobacteria. NhaA is an electrogenic Na+/H+ antiporter that exchanges 2H+ for 1Na+ (or Li+). NhaA shares with many other prokaryotic and eukaryotic antiporters a very strong dependence on pH. In order to achieve three-dimensional structure of NhaA, the previously described NhaA protein preparation was modified: (i) the wild type bacterial strain (TA16) used for homologous over-expression of NhaA was replaced with a delta nhaA strain (RK20). As a result, the purity and homogeneity of the sample was significantly improved; (ii) the previously two-step purification procedure was shortened to a single step affinity chromatography purification; (iii) a wide-range screening of crystallisation conditions, more than 20,000, was performed; (iv) a Seleno-L-methionine (SeMet) NhaA derivative was produced in order to solve the phases during structure determination. In parallel, attempts of production and crystallisation of co-complexes composed of NhaA and antibody fragments have been made. Four different monoclonal antibodies were available against NhaA. Selected antibody fragments were produced and the stability of the complex analysed. Here, the crystal structure of the pH down-regulated secondary transporter NhaA of Escherichia coli is presented at 3.45 Å resolution. A negatively charged ion funnel opens to the cytoplasm and ends in the middle of the membrane at the putative ion-binding site. There, a unique assembly of two pairs of short helices connected by crossed, extended chains creates a balanced electrostatic environment. A possible mechanism is proposed: the binding of charged substrates causes electric imbalance inducing movements, which allow for a rapid alternating access mechanism. This ion exchange machinery is regulated by a conformational change elicited by a pH signal perceived at the cytoplasmic funnel entry. The structure represents a novel fold that provides two major insights: it reveals the structural basis for the mechanism of Na+/H+ exchange and its unique regulation by pH in NhaA and in many other similar antiporters. Furthermore, it is also important for the understanding of the architecture of membrane proteins in general. However, although many aspects of the ion-translocation mechanism and pH regulation are clarified by the NhaA structure, higher resolution structures with Li+ or Na+ bound are required for understanding the ligand binding and the translocation mechanism at the atomic level. The alkaline pH-induced conformation is essential to further understand the pH-control and proton access to the binding site.
The challenging intricacies of strongly correlated electronic systems necessitate the use of a variety of complementary theoretical approaches. In this thesis, we analyze two distinct aspects of strong correlations and develop further or adapt suitable techniques. First, we discuss magnetization transport in insulating one-dimensional spin rings described by a Heisenberg model in an inhomogeneous magnetic field. Due to quantum mechanical interference of magnon wave functions, persistent magnetization currents are shown to exist in such a geometry in analogy to persistent charge currents in mesoscopic normal metal rings. The second, longer part is dedicated to a new aspect of the functional renormalization group technique for fermions. By decoupling the interaction via a Hubbard-Stratonovich transformation, we introduce collective bosonic variables from the beginning and analyze the hierarchy of flow equations for the coupled field theory. The possibility of a cutoff in the momentum transfer of the interaction leads to a new flow scheme, which we will refer to as the interaction cutoff scheme. Within this approach, Ward identities for forward scattering problems are conserved at every instant of the flow leading to an exact solution of a whole hierarchy of flow equations. This way the known exact result for the single-particle Green's function of the Tomonaga-Luttinger model is recovered.
Plural semantics for natural language understanding : a computational proof-theoretic approach
(2005)
The semantics of natural language plurals poses a number of intricate problems – both from a formal and a computational perspective. In this thesis I investigate problems of representing, disambiguating and reasoning with plurals from a computational perspective. The work defines a computationally suitable representation for important plural constructions, proposes a tractable resolution algorithm for semantic plural ambiguities, and integrates an automatic reasoning component for plurals. My solution combines insights from formal semantics, computational linguistics and automated theorem proving and is based on the following main ideas. Whereas many existing approaches to plural semantics work on a model-theoretic basis using higher-order representation languages I propose a proof-theoretic approach to plural semantics based on a flat firstorder semantic representation language thus showing that a trade-off between expressive power and logical tractability can be found. The problem of automatic disambiguation of plurals is tackled by a deliberate decision to drastically reduce recourse to contextual knowledge for disambiguation but rely instead on structurally available and thus computationally manageable information. A further central aspect of the solution lies in carefully drawing the borderline between real ambiguity and mere indeterminacy in the interpretation of plural noun phrases. As a practical result of my computational proof-theoretic approach to plural semantics I can use my methods to perform automated reasoning with plurals by applying advanced firstorder theorem provers and model-generators available off-the shelf. The results are prototypically implemented within the two logic-oriented natural language understanding applications DRoPs and Attempto. DRoPs provides an automatic plural disambiguation component for uncontrolled natural language whereas Attempto works with a constructive disambiguation strategy for controlled natural language. Both systems provide tools for the automated analysis of technical texts allowing users for example to automatically detect inconsistencies, to perform question answering, to check whether a conjecture follows from a text or to find equivalences and redundancies.
Flow velocity in rivers has a major impact on residence time of water and thus on high and low water as well as on water quality. For global scale hydrological modeling only very limited information is available for simulating flow velocity. Based on the Manning-Strickler equation, a simple algorithm to model temporally and spatially variable flow velocity was developed with the objective of improving flow routing in the global hydrological model of Water- GAP. An extensive data set of flow velocity measurements in US rivers was used to test and to validate the algorithm before integrating it into WaterGAP. In this test, flow velocity was calculated based on measured discharge and compared to measured velocity. Results show that flow velocity can be modeled satisfactorily at selected river cross sections. It turned out that it is quite sensitive to river roughness, and the results can be optimized by tuning this parameter. After the validation of the approach, the tested flow velocity algorithm has been implemented into the WaterGAP model. A final validation of its effects on the model results is currently performed.