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Schülerlabor Künstliche Intelligenz – Verhaltensforschung im Biologieunterricht mit neuen Methoden
(2023)
Die Verhaltensbiologie ist ein wichtiger Inhalt im Biologieunterricht. Das zielgerichtete, forschende Beobachten bereitet den Schüler/-innen jedoch häufg Schwierigkeiten und sollte vor allem praktisch eingeübt werden. Das Schülerlabor KILab bietet dafür eine innovative Möglichkeit.
Terpene bilden mit mehr als 81.000 Verbindungen die größte Klasse der Naturstoffe. Nichtsdestotrotz wird ihre strukturelle Vielfalt durch die Isoprenregel begrenzt. Diese besagt, dass alle primären Terpensynthaseprodukte aus Bausteinen mit fünf Kohlenstoffatomen hervorgehen. Ihre Produkte sind somit kanonisch, da sie durch ein Vielfaches von fünf Kohlenstoffatomen dargestellt sind. In dieser kumulativen Arbeit wird die mikrobielle Produktion einer Vielzahl neuartiger nicht-kanonischer Terpene beschrieben und somit der chemische Strukturraum von Terpenoiden über die Grenzen der Isoprenregel hinaus erweitert. Um dies zu erreichen, wurden in verschiedenen Ansätzen die Gene des Mevalonatwege, einschließlich einer IPP-Isomerase gemeinsam mit verschiedenen Prenylpyrosphosphat-Methyltransferasen und Terpensynthasen in E. coli exprimiert und die Produktspektren der Biosynthesewege detailliert untersucht.
Ein breites Spektrum neuer C11-Terpene wurde als Nebenprodukt der bakteriellen 2-Methylisoborneol- oder 2-Methylenbornansynthasen entdeckt. Neben elf bekannten konnten 24 neuartige C11-Terpene nachgewiesen werden, die bisher noch nicht als Terpensynthase-Produkte beschrieben wurden. Vier davon, 3,4-Dimethylcumol, 2-Methylborneol und die beiden Diastereomere von 2-Methylcitronellol, konnten identifiziert werden. Außerdem wurde das C16-Terpen 6-Methylfarnesol als Produkt identifiziert.
Die Produktselektivität einer C11-Terpensynthasen, die 2 Methylenbornansynthase aus Pseudomonas fluorescens, wurde durch einen semirationalen Protein-Engineering-Ansatz verändert. Aminosäuren des aktiven Zentrums mit Einfluss auf die Produktselektivität wurden identifiziert. Entsprechende Varianten des Enzyms führen zu gänzlich veränderten Produktspektren. So wurden neue Einblicke in die Struktur-Funktions-Beziehung für C11-Terpensynthasen gewonnen und bisher unzugängliche nicht-kanonische Terpene produziert.
Eine IPP-Methyltranferase wurde identifiziert und charakterisiert, die den C5-Baustein der Terpenbiosynthese in eine Vielzahl von C6- und C7-Prenylpyrophosphate umwandelt. Die heterologe Expression in E. coli gemeinsam mit anderen Genen der Terpenbiosynthese erweitert das potenzielle Terpensynthase-Substratspektrum außerdem um C11-, C12-, C16- und C17 Prenylpyrosphopshate. Darüber hinaus konnten polymethylierte C41-, C42-und C43-Carotinoide synthetisiert werden. So wurde die Terpenbiosynthese durch die Modifikation ihrer Bausteine erweitert und neue ungewöhnliche Terpene produziert.
We can see an increasing consumption of meat together with the corresponding behavioral adaptations in early hominins, such as Homo erectus. This new development was driven by one or more behavioral adaptations, such as a shift to a higher-quality diet, increased social interactions and/or changes in the life history strategies. The methods by which these hominins obtained meat—through scavenging the carcasses of large herbivores or hunting themselves—remain a topic of debate. They seem to have thrived in expanding grasslands, which offered few resources except for herds of large, gregarious mammals. In our study, we developed an agent-based model that simulates the behavior of a group of hunter-gatherers foraging in a reconstructed tropical grassland environment. The environmental parameters, including plant availability and prey population densities, are derived from the Serengeti National Park. In this model, agents gather or hunt various species either alone or as a group, using strategies early hominins may already have access to. The basic behavior and the implemented hunting strategies are based on data from recent hunter-gatherer societies living in tropical grasslands. Our model demonstrates how foragers may have thrived in tropical grasslands by either adopting fast hunting strategies, which often require access to sophisticated hunting tools, or by cooperating extensively, which would rely on an enhanced social structure to promote cooperative behavior. Our model can be used to study other scenarios by offering the option to change the environmental conditions and aspects of the agent behavior.
Diurnal and nocturnal behaviour of cheetahs (Acinonyx jubatus) and lions (Panthera leo) in zoos
(2022)
Mammals are constantly exposed to exogenous and endogenous influences that affect their behaviour and daily activity. Light and temperature, as well as anthropogenic factors such as husbandry routines, visitors, and feeding schedules are potential influences on animals in zoological gardens. In order to investigate the effects of some of these factors on animal behaviour, observational studies based on the analyses of activity budgets can be used. In this study, the daily and nightly activity budgets of six lions (Panthera leo) and five cheetahs (Acinonyx jubatus) from four EAZA institutions were investigated. Focused on the influencing factor light and feeding, we analysed these activity budgets descriptively. Behaviour was recorded and analysed during the winter months over an observation period of 14 days and 14 nights using infrared-sensitive cameras. Our results show that lions and cheetahs exhibit activity peaks at crepuscular and feeding times, regardless of husbandry. Thus, lions in captivity shift nocturnal behaviour familiar from the wild to crepuscular and diurnal times. In cheetahs, in contrast, captive and wild individuals show similar 24 h behavioural rhythms. The resting behaviour of both species is more pronounced at night, with cheetahs having a shorter overall sleep duration than lions. This study describes the results of the examined animals and is not predictive. Nevertheless, the results of this study make an important contribution to gaining knowledge about possible factors influencing the behaviour of lions and cheetahs in zoos and offer implications that could be useful for improving husbandry and management.
The success of the increasing use of technology in education is highly dependent on learner acceptance. Although the Technology Acceptance Model (TAM) is dominant in research for surveying acceptance of technology, it does not allow the prediction of a successful first time use of technology. The successful first time use can be determined with the survey of technology affinity, as it corresponds to the expression of certain personality traits of users and is thus detached from the specific technology. Since there are no measurement instruments for the educational sector so far and existing instruments for measuring technology affinity do not meet the specific requirements for use in the educational context (e.g., limited time for questioning), we present the single item Inclusion of Technology Affinity in Self-Scale (ITAS). In study 1 we provide evidence of convergent and discriminant validity within the general population so that a generalization of its applicability is possible. In study 2 we subsequently tested ITAS in the actual target group, the educational sector. The high correlations of the ITAS with the ATI and the control instrument TA-EG (ranging from rs = 0.679 to rs = 0.440) show that ITAS is suitable for use in research. Furthermore, the newly developed instrument convinces with its low complexity, the graphical component, which requires little text understanding and the high time saving. This research thus can contribute to the investigation of technology affinity in the educational sector helping educators to conduct technical activities with their learning group, to predict possible difficulties and adjust their planning accordingly.
Protection against pathogens is a major function of the gut microbiota. Although bacterial natural products have emerged as crucial components of host-microbiota interactions, their exact role in microbiota-mediated protection is largely unexplored. We addressed this knowledge gap with the nematode Caenorhabditis elegans and its microbiota isolate Pseudomonas fluorescens MYb115 that is known to protect against Bacillus thuringiensis (Bt) infection. We find that MYb115-mediated protection depends on sphingolipids that are derived from an iterative type I polyketide synthase (PKS), thereby describing a noncanonical pathway of bacterial sphingolipid production. We provide evidence that MYb115-derived sphingolipids affect C. elegans tolerance to Bt infection by altering host sphingolipid metabolism. This work establishes sphingolipids as structural outputs of bacterial PKS and highlights the role of microbiota-derived sphingolipids in host protection against pathogens.
Microplastics are small plastic fragments that are widely distributed in marine and terrestrial environments. While the soil ecosystem represents a large reservoir for plastic, research so far has focused mainly on the impact on aquatic ecosystems and there is a lack of information on the potentially adverse effects of microplastics on soil biota. Earthworms are key organisms of the soil ecosystem and are due to their crucial role in soil quality and fertility a suitable and popular model organism in soil ecotoxicology.
Therefore, the aim of this study was to gain insight into the effects of environmentally relevant concentrations of microplastics on the earthworm Eisenia andrei on multiple levels of biological organization after different exposure periods. Earthworms were exposed to two types of microplastics: (1) polystyrene-HBCD and (2) car tire abrasion in natural soil for 2, 7, 14 and 28 d. Acute and chronic toxicity and all subcellular investigations were conducted for all exposure times, avoidance behavior assessed after 48 h and reproduction after 28 d. Subcellular endpoints included enzymatic biomarker responses, namely, carboxylesterase, glutathione peroxidase, acetylcholinesterase, glutathione reductase, glutathione S-transferase and catalase activities, as well as fluorescence-based measurements of oxidative stress-related markers and multixenobiotic resistance activity. Multiple biomarkers showed significant changes in activity, but a recovery of most enzymatic activities could be observed after 28 d. Overall, only minor effects could be observed on a subcellular level, showing that in this exposure scenario with environmentally relevant concentrations based on German pollution levels the threat to soil biota is minimal. However, in areas with higher concentrations of microplastics in the environment, these results can be interpreted as an early warning signal for more adverse effects. In conclusion, these findings provide new insights regarding the ecotoxicological effects of environmentally relevant concentrations of microplastics on soil organisms.
Holocarpic oomycetes infecting freshwater diatoms are obligate endobiotic parasites reported from a wide range of habitats. So far, the taxonomy of and phylogeny of most species remains unresolved, since most have not been reported throughout the past decades and sequence data are available for only the four species, Aphanomycopsis bacillariacearum, Diatomophthora gillii, Ectrogella bacillariacearum, and the recently-discovered species Miracula moenusica. In the current study, a new freshwater diatom parasite resembling Ectrogella bacillariacearum in the sense of Scherffel was discovered from pennate diatoms (Ulnaria acus, Ulnaria ulna) collected from the small stream Einbúalækur on Víkurskarð, North Iceland and investigated for its life cycle and phylogenetic placement. In contrast to the original description, Scherffel reports an achlya-like spore discharge for Ectrogella bacillariacearum. The phylogenetic reconstruction and morphological characterisation in this study revealed that Scherffel’s E. bacillariacearum is largely unrelated to the epitype of the species and is a member of the early-diverging genus Miracula. Consequently, the new species is described as M. einbuarlaekurica in the present study. This adds a second freshwater member to the genus, demonstrating the high ecological adaptability of the genus, which thrives in both freshwater and marine ecosystems.
Despite islands contributing only 6.7% of land surface area, they harbor ~20% of the Earth's biodiversity, but unfortunately also ~50% of the threatened species and 75% of the known extinctions since the European expansion around the globe. Due to their geological and geographic history and characteristics, islands act simultaneously as cradles of evolutionary diversity and museums of formerly widespread lineages—elements that permit islands to achieve an outstanding endemicity. Nevertheless, the majority of these endemic species are inherently vulnerable due to genetic and demographic factors linked with the way islands are colonized. Here, we stress the great variation of islands in their physical geography (area, isolation, altitude, latitude) and history (age, human colonization, human density). We provide examples of some of the most species rich and iconic insular radiations. Next, we analyze the natural vulnerability of the insular biota, linked to genetic and demographic factors as a result of founder events as well as the typically small population sizes of many island species. We note that, whereas evolution toward island syndromes (including size shifts, derived insular woodiness, altered dispersal ability, loss of defense traits, reduction in clutch size) might have improved the ability of species to thrive under natural conditions on islands, it has simultaneously made island biota disproportionately vulnerable to anthropogenic pressures such as habitat loss, overexploitation, invasive species, and climate change. This has led to the documented extinction of at least 800 insular species in the past 500 years, in addition to the many that had already gone extinct following the arrival of first human colonists on islands in prehistoric times. Finally, we summarize current scientific knowledge on the ongoing biodiversity loss on islands worldwide and express our serious concern that the current trajectory will continue to decimate the unique and irreplaceable natural heritage of the world's islands. We conclude that drastic actions are urgently needed to bend the curve of the alarming rates of island biodiversity loss.