racoon_clip – a complete pipeline for single-nucleotide analyses of iCLIP and eCLIP data
- Here, we introduce racoon_clip, a sustainable and fully automated pipeline for the complete processing of iCLIP and eCLIP data to extract RNA binding signal at single-nucleotide resolution. racoon_clip is easy to install and execute, with multiple pre-settings and fully customizable parameters, and outputs a conclusive summary report with visualizations and statistics for all analysis steps.
Author: | Melina KlostermannORCiDGND, Katharina ZarnackORCiDGND |
---|---|
URN: | urn:nbn:de:hebis:30:3-830766 |
URL: | https://www.biorxiv.org/content/10.1101/2024.02.27.582237v1 |
DOI: | https://doi.org/10.1101/2024.02.27.582237 |
Parent Title (English): | bioRxiv |
Publisher: | bioRxiv |
Document Type: | Preprint |
Language: | English |
Date of Publication (online): | 2024/03/01 |
Date of first Publication: | 2024/03/01 |
Publishing Institution: | Universitätsbibliothek Johann Christian Senckenberg |
Release Date: | 2024/03/04 |
Issue: | 2024.02.27.582237 Version 1 |
Edition: | Version 1 |
Page Number: | 12 |
HeBIS-PPN: | 516988921 |
Institutes: | Fachübergreifende Einrichtungen / Buchmann Institut für Molekulare Lebenswissenschaften (BMLS) |
Dewey Decimal Classification: | 5 Naturwissenschaften und Mathematik / 57 Biowissenschaften; Biologie / 570 Biowissenschaften; Biologie |
Sammlungen: | Universitätspublikationen |
Licence (German): | Creative Commons - CC BY-NC - Namensnennung - Nicht kommerziell 4.0 International |