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Human brain dynamics and functional connectivity fluctuate over a range of temporal scales in coordination with internal states and environmental demands. However, the neurobiological significance and consequences of functional connectivity dynamics during rest have not yet been established. We show that the coarse-grained clustering of whole-brain dynamic connectivity measured with magnetic resonance imaging reveals discrete patterns (dynamic connectivity states) associated with wakefulness and sleep. We validate this using EEG in healthy subjects and patients with narcolepsy and by matching our results with previous findings in a large collaborative database. We also show that drowsiness may account for previous reports of metastable connectivity states associated with different levels of functional integration. This implies that future studies of transient functional connectivity must independently monitor wakefulness. We conclude that a possible neurobiological significance of dynamic connectivity states, computed at a sufficiently coarse temporal scale, is that of fluctuations in wakefulness.
NEK family kinases are serine/threonine kinases that have been functionally implicated in the regulation of the disjunction of the centrosome, the assembly of the mitotic spindle, the function of the primary cilium and the DNA damage response. NEK1 shows pleiotropic functions and has been found to be mutated in cancer cells, ciliopathies such as the polycystic kidney disease, as well as in the genetic diseases short-rib thoracic dysplasia, Mohr-syndrome and amyotrophic lateral sclerosis. NEK1 is essential for the ionizing radiation DNA damage response and priming of the ATR kinase and of Rad54 through phosphorylation. Here we report on the structure of the kinase domain of human NEK1 in its apo- and ATP-mimetic inhibitor bound forms. The inhibitor bound structure may allow the design of NEK specific chemo-sensitizing agents to act in conjunction with chemo- or radiation therapy of cancer cells. Furthermore, we characterized the dynamic protein interactome of NEK1 after DNA damage challenge with cisplatin. Our data suggest that NEK1 and its interaction partners trigger the DNA damage pathways responsible for correcting DNA crosslinks.
CryoEM structures of membrane pore and prepore complex reveal cytolytic mechanism of Pneumolysin
(2017)
Many pathogenic bacteria produce pore-forming toxins to attack and kill human cells. We have determined the 4.5 Å structure of the ~2.2 MDa pore complex of pneumolysin, the main virulence factor of Streptococcus pneumoniae, by cryoEM. The pneumolysin pore is a 400 Å ring of 42 membrane-inserted monomers. Domain 3 of the soluble toxin refolds into two ~85 Å β-hairpins that traverse the lipid bilayer and assemble into a 168-strand β-barrel. The pore complex is stabilized by salt bridges between β-hairpins of adjacent subunits and an internal α-barrel. The apolar outer barrel surface with large sidechains is immersed in the lipid bilayer, while the inner barrel surface is highly charged. Comparison of the cryoEM pore complex to the prepore structure obtained by electron cryo-tomography and the x-ray structure of the soluble form reveals the detailed mechanisms by which the toxin monomers insert into the lipid bilayer to perforate the target membrane.
Membrane proteins frequently assemble into higher order homo- or hetero-oligomers within their natural lipid environment. This complex formation can modulate their folding, activity as well as substrate selectivity. Non-disruptive methods avoiding critical steps, such as membrane disintegration, transfer into artificial environments or chemical modifications are therefore essential to analyze molecular mechanisms of native membrane protein assemblies. The combination of cell-free synthetic biology, nanodisc-technology and non-covalent mass spectrometry provides excellent synergies for the analysis of membrane protein oligomerization within defined membranes. We exemplify our strategy by oligomeric state characterization of various membrane proteins including ion channels, transporters and membrane-integrated enzymes assembling up to hexameric complexes. We further indicate a lipid-dependent dimer formation of MraY translocase correlating with the enzymatic activity. The detergent-free synthesis of membrane protein/nanodisc samples and the analysis by LILBID mass spectrometry provide a versatile platform for the analysis of membrane proteins in a native environment.
Summary: Persistence with osteoporosis therapy is vital for fracture prevention. This non-interventional study of postmenopausal women receiving denosumab in Germany, Austria, Greece, and Belgium found that persistence with denosumab remains consistently high after 24 months in patients at high risk of fracture.
Purpose: Continued persistence with osteoporosis therapy is vital for fracture prevention. This non-interventional study of clinical practice evaluated medication-taking behavior of postmenopausal women receiving denosumab in Germany, Austria, Greece, and Belgium and factors influencing persistence.
Methods: Subcutaneous denosumab (60 mg every 6 months) was assigned according to prescribing information and local guidelines before and independently of enrollment; outcomes were recorded during routine practice for up to 24 months. Persistence was defined as receiving the subsequent injection within 6 months + 8 weeks of the previous injection and adherence as administration of subsequent injections within 6 months ± 4 weeks of the previous injection. Medication coverage ratio (MCR) was calculated as the proportion of time a patient was covered by denosumab. Associations between pre-specified baseline covariates and 24-month persistence were assessed using multivariable logistic regression.
Results: The 24-month analyses included 1479 women (mean age 66.3–72.5 years) from 140 sites; persistence with denosumab was 75.1–86.0%, adherence 62.9–70.1%, and mean MCR 87.4–92.4%. No covariate had a significant effect on persistence across all four countries. For three countries, a recent fall decreased persistence; patients were generally older with chronic medical conditions. In some countries, other covariates (e.g., older age, comorbidity, immobility, and prescribing reasons) decreased persistence. Adverse drug reactions were reported in 2.3–6.9% patients.
Conclusions: Twenty-four-month persistence with denosumab is consistently high among postmenopausal women in Europe and may be influenced by patient characteristics. Further studies are needed to identify determinants of low persistence.
Gleichstellungs-Monitor 2016
(2017)
Der Kaiserschnitt ist wahrscheinlich eine der am häufigsten durchgeführten operativen Eingriffe weltweit. Noch vor einem Jahrhundert galt er als Notoperation, um das Leben des Kindes und der Mutter zu retten, heute hat er zu einer gängigen Geburtspraxis etabliert, fast jedes dritte Kind kommt mittlerweile per Sectio zu Welt. Dieser signifikante Anstieg trat in den letzten Jahren viele polarisierende Diskussionen los, die nach den Ursachen dieses Wandels forschen. Die Weltgesundheitsorganisation kritisiert, dass der unnötige Anstieg in Lateinamerika und Asien bereits epidemische Ausmaße erreicht habe. Im Mittelpunkt der Forschung stehen die diversen Indikationen, die maternalen und neonatalen Kurz- und Langzeitfolgen sowie die Vor- und Nachteile verschiedener anästhetischer Verfahren während des Eingriffs.
Ziel dieser Arbeit war es, das Forschungsaufkommen zum Thema Sectio zwischen 1900 und 2013 sowohl nach quantitativen als auch nach qualitativen Aspekten zu beleuchten, wobei auf die Daten im Web of Science zurückgegriffen wurde. Nach Festlegung eines Suchterminus mit maximaler Trefferanzahl wurde ein Datenpool von 12.608 Publikationen gewonnen, dessen bibliographische Daten im Rahmen von unterschiedlichen Fragestellungen untersucht und ausgewertet wurden. Um die Ergebnisse anschaulich zu repräsentieren, wurden diverse Diagrammarten gewählt, für globale Sachverhalte wurde Kartenanamorphoten verwendet.
Für das ausgewählte Datenkontingent ist die Sprache Englisch dominierend, es wurden 92,8 % aller identifizierten Publikationen (≙ 11.706 von 12.608) in dieser Sprache abgefasst. Hierbei stellt der Article die am häufigsten gewählte Erscheinungsform (57,4 %) dar.
Die Publikationsanzahl hat im Laufe des betrachteten Jahrhunderts stetig zugenommen. Dieser Zuwachs erfolgte vor allem in den letzten drei Dekaden, was zum einen am gestiegenen Forschungsinteresse am Thema Kaiserschnitt und zum anderen an der gestiegenen Publikationsanzahl liegt. Zudem wurde im Jahre 1991 bei der Datenbankabfrage die Topics-Suche eingeführt. Einzelne Publikationsmaxima können darauf zurückgeführt werden, dass die
Wissenschaft gesteigertes Interesse an wegweisenden Entwicklungen rund um das Thema Kaiserschnitt zeigte.
Das Land, das am meisten Publikationen (29 %) hervorbrachte, ist die USA – dort befinden sich auch die meisten Institutionen (1.517), die zum Thema Kaiserschnitt Forschung betreiben und es ist das Land mit dem höchsten h-Index (84). Resultierend aus diesen Daten kann den USA eine herausragende Position bezüglich der behandelnden Thematik zugeschrieben werden. Doch auch in europäischen Ländern wie Großbritannien und Deutschland kann eine hohe Forschungsaktivität nachgewiesen werden. Bei Betrachtung der Zitationsrate der Länder lag Schweden vorne (20,4), obwohl dort deutlich weniger publiziert wurde. Neben der renommierten Harvard University war auch die Partners Healthcare, Boston an der Forschung maßgeblich beteiligt.
Bei der Zeitschriftenanalyse ist das American Journal of Obstetrics and Gynecology mit 1.432 Publikationen das meistpublizierende Fachjournal, mit 16.446 Zitierungen ist es auch gleichzeitig das meistzitierte. Die höchste Zitationsrate von 19,97 wurde der Zeitschrift Obstetrics&Gynecology zuteil, gefolgt von Anesthesia&Analgesia.
Es konnte eine signifikante Korrelation festgestellt werden zwischen der Publikationsanzahl und dem Zeitraum, in denen diese veröffentlicht wurden
Bei den Autorenanalysen wurde die Leistung anhand von Publikationsvolumen, Zitationsrate und h-Index beurteilt. Als produktivster Autor wurde Prof. Aaron Caughey identifiziert, er publizierte 70mal zum Thema Kaiserschnitt, zum Großteil jedoch als Letztautor. Den höchsten h-Index erreicht der Wissenschaftler Kenneth Leveno mit einem Wert von 23, die höchste Zitationsrate Baha Sibai mit 42,26.
Es konnte ebenfalls aufgezeigt werden, dass die Kooperationsbeziehungen in den letzten Jahren an Bedeutung gewonnen haben und vor allem ab Beginn des 21. Jahrhunderts signifikant angestiegen sind. Zurückzuführen ist diese Entwicklung auf die vereinfachte und schnelle Kommunikation aufgrund der weiterentwickelten Technik und die vorangeschrittene Globalisierung. Die USA
ist der bedeutendste Kooperationspartner unter den Ländern, intensive Zusammenarbeit kann für Großbritannien und Kanada festgestellt werden.
NMR spectroscopy is a powerful technique to study ribonucleic acids (RNAs) which are key players in a plethora of cellular processes. Although the NMR toolbox for structural studies of RNAs expanded during the last decades, they often remain challenging. Here, we show that solvent paramagnetic relaxation enhancements (sPRE) induced by the soluble, paramagnetic compound Gd(DTPA-BMA) provide a quantitative measure for RNA solvent accessibility and encode distance-to-surface information that correlates well with RNA structure and improves accuracy and convergence of RNA structure determination. Moreover, we show that sPRE data can be easily obtained for RNAs with any isotope labeling scheme and is advantageous regarding sample preparation, stability and recovery. sPRE data show a large dynamic range and reflect the global fold of the RNA suggesting that they are well suited to identify interaction surfaces, to score structural models and as restraints in RNA structure determination.
Background: Correct species identification of blow flies is a crucial step for understanding their biology, which can be used not only for designing fly control programs, but also to determine the minimum time since death. Identification techniques are usually based on morphological and molecular characters. However, the use of classical morphology requires experienced entomologists for correct identification; while molecular techniques rely on a sound laboratory expertise and remain ambiguous for certain taxa. Landmark-based geometric morphometric analysis of insect wings has been extensively applied in species identification. However, few wing morphometric analyses of blow fly species have been published.
Methods: We applied a landmark-based geometric morphometric analysis of wings for species identification of 12 medically and forensically important blow fly species of Thailand. Nineteen landmarks of each right wing of 372 specimens were digitised. Variation in wing size and wing shape was analysed and evaluated for allometric effects. The latter confirmed the influence of size on the shape differences between species and sexes. Wing shape variation among genera and species were analysed using canonical variates analysis followed by a cross-validation test.
Results: Wing size was not suitable for species discrimination, whereas wing shape can be a useful tool to separate taxa on both, genus and species level depending on the analysed taxa. It appeared to be highly reliable, especially for classifying Chrysomya species, but less robust for a species discrimination in the genera Lucilia and Hemipyrellia. Allometry did not affect species separation but had an impact on sexual shape dimorphism.
Conclusions: A landmark-based geometric morphometric analysis of wings is a useful additional method for species discrimination. It is a simple, reliable and inexpensive method, but it can be time-consuming locating the landmarks for a large scale study and requires non-damaged wings for analysis.
Cardiovascular disease is the leading cause of death worldwide. Aging is among the greatest risk factors for cardiovascular disease. Cardiovascular disease comprises several diseases, for example myocardial infarction, elevated blood pressure and stroke. Many processes are known to promote or worsen cardiovascular disease and in the present study, cellular senescence and inflammatory activation were of special interest, as they have a strong association to aging and can be seen as hallmarks of cellular aging.
Long noncoding RNAs (lncRNAs) are noncoding RNAs with a length of more than 200 nucleotides. In recent years, numerous regulatory functions were shown for these transcripts and lncRNAs were shown to directly interact with DNA, RNA and proteins. The long noncoding RNA H19 was among the first described noncoding RNAs and was initially shown to act as a tumor suppressor. More recently, several studies showed oncogenic roles for H19. In regards to the cardiovascular system, H19 was not analyzed before.
We show that H19 is the most profoundly downregulated lncRNA in endothelial cells of aged mice compared to young littermates. Microarray analysis of human primary endothelial cells upon pharmacological H19 depletion revealed an involvement of H19 in cell cycle regulation. Loss of H19 in human endothelial cells in vitro led to reduced proliferation and to increased senescence. H19 depletion was shown to counteract proliferation before, but none of the described mechanisms applied to endothelial cells. We show that the reduction in proliferative capacity and the pro-senescent function of H19 is most probably mediated by an upregulation of p16ink4A and p21 upon H19 depletion.
When we compared the angiogenic capacity of aortic endothelial cells from young and aged mice in an aortic ring assay, rings from aged mice showed a reduced cumulative sprout length. Interestingly, pharmacological inhibition of H19 in aortic rings of young animals, where H19 is highly expressed, was sufficient to reduce the cumulative sprout length to levels we observed from aged animals. Furthermore, overexpression of human H19 in aortic rings of aged mice, where H19 is poorly expressed, rescued the impaired angiogenic capacity of aged endothelial cells.
We generated inducible endothelial-specific H19 knockout mice (H19iEC-KO) and subjected these animals to hind limb ischemia surgery followed by perfusion analysis in the hind limbs by laser-doppler velocimetry and histological analysis. Perfusion in the operated hind limb was increased in H19iEC-KO compared to Ctrl littermates, which was in contrast to a reduction in capillary density in the operated hind limbs of H19iEC-KO animals compared to Ctrl littermates and to our previous results. Analysis of arteriogenesis revealed an increase in collateral growth upon EC-specific H19 depletion in the ischemic hind limbs, which explains the increase in perfusion despite the reduction in capillary density. Further characterization of the animals revealed an increase in leukocyte infiltration into the tissue in the ischemic hind limbs upon endothelial-specific H19 depletion, indicating a potential role of H19 in inflammatory tissue activation.
Reanalysis of the microarray data from human primary endothelial cells upon H19 depletion revealed an association of H19 with inflammatory signaling and more specifically with IL-6/JAK2/STAT3 signaling. Analysis of cell surface adhesion molecule expression revealed an upregulation of ICAM-1 and VCAM-1 on mRNA level and an increase of the abundance of the two proteins on the cell surface of human primary endothelial cells. Consequently, adhesion of isolated human monocytes to human primary endothelial cells was increased upon H19 depletion in vitro. Interestingly, TNF-α mediated inflammatory activation of primary human endothelial cells repressed H19 expression. H19 did not function via previously described mechanisms. We excluded a competitive endogenous RNA (ceRNA) function for H19 in endothelial cells and showed that miR-675, which is processed from H19, does not play a role in the endothelium. Furthermore, H19 did not regulate previously described genes or pathways.
Analysis of transcription factor activity upon H19 depletion and overexpression revealed a differential activity of STAT3. STAT3 phosphorylation at TYR705 and thus activation was increased upon H19 depletion. Inhibition of STAT3 activation using a small compound inhibitor abolished the effects of H19 depletion on mRNA expression of p21, ICAM-1 and VCAM-1 and on proliferation, indicating that the effects of H19 are at least partially mediated via STAT3. STAT3 was shown to have positive effects on the cardiovascular system before, most likely due to upregulation of VEGF in a STAT3-dependent manner. We were not able to confirm previously described mechanisms for STAT3 in the present study and propose a new mechanism of action for the H19-dependent regulation of STAT3. Taken together, these results identify the long noncoding RNA H19 as a pivotal regulator of endothelial cell function. Figure 38 summarizes the described functions of H19 in endothelial cells.
Measuring information processing in neural data: The application of transfer entropy in neuroscience
(2017)
It is a common notion in neuroscience research that the brain and neural systems in general "perform computations" to generate their complex, everyday behavior (Schnitzer, 2002). Understanding these computations is thus an important step in understanding neural systems as a whole (Carandini, 2012;Clark, 2013; Schnitzer, 2002; de-Wit, 2016). It has been proposed that one way to analyze these computations is by quantifying basic information processing operations necessary for computation, namely the transfer, storage, and modification of information (Langton, 1990; Mitchell, 2011; Mitchell, 1993;Wibral, 2015). A framework for the analysis of these operations has been emerging (Lizier2010thesis), using measures from information theory (Shannon, 1948) to analyze computation in arbitrary information processing systems (e.g., Lizier, 2012b). Of these measures transfer entropy (TE) (Schreiber2000), a measure of information transfer, is the most widely used in neuroscience today (e.g., Vicente, 2011; Wibral, 2011; Gourevitch, 2007; Vakorin, 2010; Besserve, 2010; Lizier, 2011; Richter, 2016; Huang, 2015; Rivolta, 2015; Roux, 2013). Yet, despite this popularity, open theoretical and practical problems in the application of TE remain (e.g., Vicente, 2011; Wibral, 2014a). The present work addresses some of the most prominent of these methodological problems in three studies.
The first study presents an efficient implementation for the estimation of TE from non-stationary data. The statistical properties of non-stationary data are not invariant over time such that TE can not be easily estimated from these observations. Instead, necessary observations can be collected over an ensemble of data, i.e., observations of physical or temporal replications of the same process (Gomez-Herrero, 2010). The latter approach is computationally more demanding than the estimation from observations over time. The present study demonstrates how to handles this increased computational demand by presenting a highly-parallel implementation of the estimator using graphics processing units.
The second study addresses the problem of estimating bivariate TE from multivariate data. Neuroscience research often investigates interactions between more than two (sub-)systems. It is common to analyze these interactions by iteratively estimating TE between pairs of variables, because a fully multivariate approach to TE-estimation is computationally intractable (Lizier, 2012a; Das, 2008; Welch, 1982). Yet, the estimation of bivariate TE from multivariate data may yield spurious, false-positive results (Lizier, 2012a;Kaminski, 2001; Blinowska, 2004). The present study proposes that such spurious links can be identified by characteristic coupling-motifs and the timings of their information transfer delays in networks of bivariate TE-estimates. The study presents a graph-algorithm that detects these coupling motifs and marks potentially spurious links. The algorithm thus partially corrects for spurious results due to multivariate effects and yields a more conservative approximation of the true network of multivariate information transfer.
The third study investigates the TE between pre-frontal and primary visual cortical areas of two ferrets under different levels of anesthesia. Additionally, the study investigates local information processing in source and target of the TE by estimating information storage (Lizier, 2012) and signal entropy. Results of this study indicate an alternative explanation for the commonly observed reduction in TE under anesthesia (Imas, 2005; Ku, 2011; Lee, 2013; Jordan, 2013; Untergehrer, 2014), which is often explained by changes in the underlying coupling between areas. Instead, the present study proposes that reduced TE may be due to a reduction in information generation measured by signal entropy in the source of TE. The study thus demonstrates how interpreting changes in TE as evidence for changes in causal coupling may lead to erroneous conclusions. The study further discusses current bast-practice in the estimation of TE, namely the use of state-of-the-art estimators over approximative methods and the use of optimization procedures for estimation parameters over the use of ad-hoc choices. It is demonstrated how not following this best-practice may lead to over- or under-estimation of TE or failure to detect TE altogether.
In summary, the present work proposes an implementation for the efficient estimation of TE from non-stationary data, it presents a correction for spurious effects in bivariate TE-estimation from multivariate data, and it presents current best-practice in the estimation and interpretation of TE. Taken together, the work presents solutions to some of the most pressing problems of the estimation of TE in neuroscience, improving the robust estimation of TE as a measure of information transfer in neural systems.
Der digitale Wandel wirkt sich auf das alltägliche Leben in der modernen Lebenswelt im 21. Jahrhundert aus. Ob im Berufs- oder Privatleben, digitale Medien sind nicht mehr aus dem alltäglichen Leben wegzudenken und sie erleichtern das Leben maßgeblich.
E-Learning wird insbesondere in der Erwachsenenbildung benutzt und diese Branche "boomt". Umstritten ist dennoch, ob digitale Medien und E-Learning in Schulen eingesetzt werden sollten und ob ein Lernen und Lehren mit neuen Medien sinnvoll ist. Derzeitig ist keine bundesweite einheitliche Lehrerausbildung bezüglich des Umgangs mit digitalen Medien im Kontext Lehren und Lernen und den damit verbundenen Herausforderungen vorhanden.
Es stellt sich die Frage, wie neue Medien im Unterricht verwendet werden und welche Aspekte beim Lehren zu beachten sind.
A balanced sphingolipid rheostat is indispensable for dendritic cell function and survival and thus initiation of an immune response. Sphingolipid levels are dynamically maintained by the action of sphingolipid enzymes of which sphingosine kinases, S1P phosphatases (SGPP-1/2) and S1P lyase (SGPL-1), are pivotal in the balance of S1P and sphingosine levels. In this study, we present that SGPP-1 and SGPL-1 are regulated in inflammatory dendritic cells and contribute to S1P fate. TLR-dependent activation caused SGPL-1 protein downregulation with subsequent decrease of enzymatic activity by two-thirds. In parallel, confocal fluorescence microscopy revealed that endogenous SGPP-1 was expressed in nuclei of naive dendritic cells and was translocated into the cytoplasmatic compartment upon inflammatory stimulation resulting in dephosphorylation of S1P. Mass spectrometric determination showed that a part of the resulting sphingosine was released from the cell, increasing extracellular levels. Another route of diminishing intracellular S1P was possibly taken by its export via ATP-binding cassette transporter C1 which was upregulated in array analysis, while the S1P transporter, spinster homolog 2, was not relevant in dendritic cells. These investigations newly describe the sequential expression and localization of the endogenous S1P regulators SGPP-1 and SGPL-1 and highlight their contribution to the sphingolipid rheostat in inflammation.
Flightless-I governs cell fate by recruiting the SUMO isopeptidase SENP3 to distinct HOX genes
(2017)
Background: Despite recent studies on the role of ubiquitin-related SUMO modifier in cell fate decisions, our understanding on precise molecular mechanisms of these processes is limited. Previously, we established that the SUMO isopeptidase SENP3 regulates chromatin assembly of the MLL1/2 histone methyltransferase complex at distinct HOX genes, including the osteogenic master regulator DLX3. A comprehensive mechanism that regulates SENP3 transcriptional function was not understood.
Results: Here, we identified flightless-I homolog (FLII), a member of the gelsolin family of actin-remodeling proteins, as a novel regulator of SENP3. We demonstrate that FLII is associated with SENP3 and the MLL1/2 complex. We further show that FLII determines SENP3 recruitment and MLL1/2 complex assembly on the DLX3 gene. Consequently, FLII is indispensible for H3K4 methylation and proper loading of active RNA polymerase II at this gene locus. Most importantly, FLII-mediated SENP3 regulation governs osteogenic differentiation of human mesenchymal stem cells.
Conclusion: Altogether, these data reveal a crucial functional interconnection of FLII with the sumoylation machinery that converges on epigenetic regulation and cell fate determination.
Background: Aside from the fully licensed herbal medicines there are products on the European pharmaceutical market which are registered by virtue of their longstanding traditional use. The normal registration procedure does not apply to them because presently they do not meet the legal requirements for a full license as set out in the relevant European Union Directive. One of these requirements, “proof of tradition”, has so far been dealt with in different ways and fails to meet the criteria of good practice.
Method: This analysis is based on a selective literature search in PubMed and in databases of medical and pharmaceutical history, interviews with licensing experts, a consensus meeting attended by researchers with a background in general medicine, phytotherapy, medical and pharmaceutical history, biometry, ethnopharmacology, pharmacognosy and the pharmaceutical industry.
Results and discussion: The 2004 EU Directive, which governs the registration of Traditional Herbal Medicinal Products and demands proof of tradition, is a regulatory construct and, above all, the outcome of a political process that has ended in a pragmatic compromise. The concept of tradition applied in the Directive does not sufficiently reflect the semantic breadth of the term. The only condition defined is that a specific commercial preparation needs to have been on the market for 30 years (15 of them inside the EU). Such an approach does not make full scientific use of the evidence available because the information excerpted from historical sources, if adequately processed, may yield valuable insights. This applies to indications, modes of application, efficacy and product safety (innocuousness). Such criteria should enter in full into the benefit-risk-analysis of applied preparations, in the registration process as well as in the therapeutic practice.
Conclusion: When registering Traditional Herbal Medicinal Products the criterion of evidence-based medicine will only be met if all the facts available are assessed and evaluated, over and above the formally stipulated regulatory provisions (30 years, product reference). To this end, the scientific methods (from among the natural, life or cultural sciences), which are recognized as authoritative in each case, must be applied.
The comprehensive assessment of pain-related human phenotypes requires combinations of nociceptive measures that produce complex high-dimensional data, posing challenges to bioinformatic analysis. In this study, we assessed established experimental models of heat hyperalgesia of the skin, consisting of local ultraviolet-B (UV-B) irradiation or capsaicin application, in 82 healthy subjects using a variety of noxious stimuli. We extended the original heat stimulation by applying cold and mechanical stimuli and assessing the hypersensitization effects with a clinically established quantitative sensory testing (QST) battery (German Research Network on Neuropathic Pain). This study provided a 246 × 10-sized data matrix (82 subjects assessed at baseline, following UV-B application, and following capsaicin application) with respect to 10 QST parameters, which we analyzed using machine-learning techniques. We observed statistically significant effects of the hypersensitization treatments in 9 different QST parameters. Supervised machine-learned analysis implemented as random forests followed by ABC analysis pointed to heat pain thresholds as the most relevantly affected QST parameter. However, decision tree analysis indicated that UV-B additionally modulated sensitivity to cold. Unsupervised machine-learning techniques, implemented as emergent self-organizing maps, hinted at subgroups responding to topical application of capsaicin. The distinction among subgroups was based on sensitivity to pressure pain, which could be attributed to sex differences, with women being more sensitive than men. Thus, while UV-B and capsaicin share a major component of heat pain sensitization, they differ in their effects on QST parameter patterns in healthy subjects, suggesting a lack of redundancy between these models.
Zwei der meist zitierten Aussagen zum Thema Bibliotheken liegen zeitlich und räumlich ganz nahe beieinander: Nur wenige Jahre nach dem Tod Goethes wurde in seiner Heimatstadt Frankfurt zu seinen Ehren ein Denkmal aufgestellt, welches der Philosoph Arthur Schopenhauer sehr bewunderte. Vielleicht ist es kein Zufall, dass es ausgerechnet in der Stadtbibliothek stand, die der berühmte Eigenbrötler bei seinen Spaziergängen am Mainufer fast täglich besuchte. Aus ihr wurde später eine der sieben Bibliotheken in Hessen, die heute "regionalbibliothekarische Aufgaben" wahrnehmen. Warum gerade sieben, und warum gerade diese und nicht andere? Und worin genau bestehen diese Aufgaben?
Gilt Schopenhauers Satz über die Bibliothek als Gedächtnis denn auch heute noch, in Zeiten von Digitalisierung und Internet? Eine Bibliothek speichert tatsächlich Mengen an Information, die das menschliche Gedächtnisvolumen weit übersteigen. Ihre Funktion als Wissensspeicher kann sie aber (anders als zu Schopenhauers Zeiten) nur dann behaupten, wenn sie nicht einfach sammelt und bewahrt – das kann heutzutage jede Serverfarm – sondern darüber hinaus auswählt, ordnet und vor allem auch verständlich nach außen vermittelt. Zu Schopenhauers Zeiten noch ziemlich elitäre Büchertempel, stehen wissenschaftliche Bibliotheken und ihre Dienstleistungen heute jedermann offen, ob direkt vor Ort oder online.
Dazu kommt aber bei den Regionalbibliotheken noch eine andere, politische Dimension, die sie von wissenschaftlichen Gebrauchsbibliotheken abhebt: Sie sind Gedächtnisorte. Regionalbibliotheken haben eine identitätsbildende Funktion: Wir - in diesem Fall heißt das: wir Hessen - sind das, woran wir uns gemeinsam erinnern. Die sieben hier vorgestellten Bibliotheken sammeln deshalb arbeitsteilig alle Publikationen aus Hessen wie auch alle über das heutige Bundesland und seine Vorgängerstaaten – Millionen von Einzelstücken. Zusammen mit den Objekten der Museen und den Dokumenten der Archive liefern sie den Rohstoff für das kollektive Gedächtnis der Hessen.
Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinase
(2017)
The two isoforms of the Bcr-Abl tyrosine kinase, p210 and p190, are associated with different leukemias and have a dramatically different signaling network, despite similar kinase activity. To provide a molecular rationale for these observations, we study the Dbl-homology (DH) and Pleckstrin-homology (PH) domains of Bcr-Abl p210, which constitute the only structural differences to p190. Here we report high-resolution structures of the DH and PH domains and characterize conformations of the DH–PH unit in solution. Our structural and functional analyses show no evidence that the DH domain acts as a guanine nucleotide exchange factor, whereas the PH domain binds to various phosphatidylinositol-phosphates. PH-domain mutants alter subcellular localization and result in decreased interactions with p210-selective interaction partners. Hence, the PH domain, but not the DH domain, plays an important role in the formation of the differential p210 and p190 Bcr-Abl signaling networks.
β-barrel proteins mediate nutrient uptake in bacteria and serve vital functions in cell signaling and adhesion. For the 14-strand outer membrane protein G of Escherichia coli, opening and closing is pH-dependent. Different roles of the extracellular loops in this process were proposed, and X-ray and solution NMR studies were divergent. Here, we report the structure of outer membrane protein G investigated in bilayers of E. coli lipid extracts by magic-angle-spinning NMR. In total, 1847 inter-residue 1H–1H and 13C–13C distance restraints, 256 torsion angles, but no hydrogen bond restraints are used to calculate the structure. The length of β-strands is found to vary beyond the membrane boundary, with strands 6–8 being the longest and the extracellular loops 3 and 4 well ordered. The site of barrel closure at strands 1 and 14 is more disordered than most remaining strands, with the flexibility decreasing toward loops 3 and 4. Loop 4 presents a well-defined helix.
Midkine is a pleiotropic factor, which is involved in angiogenesis. However, its mode of action in this process is still ill defined. The function of midkine in arteriogenesis, the growth of natural bypasses from pre-existing collateral arteries, compensating for the loss of an occluded artery has never been investigated. Arteriogenesis is an inflammatory process, which relies on the proliferation of endothelial cells and smooth muscle cells. We show that midkine deficiency strikingly interferes with the proliferation of endothelial cells in arteriogenesis, thereby interfering with the process of collateral artery growth. We identified midkine to be responsible for increased plasma levels of vascular endothelial growth factor A (VEGFA), necessary and sufficient to promote endothelial cell proliferation in growing collaterals. Mechanistically, we demonstrate that leukocyte domiciled midkine mediates increased plasma levels of VEGFA relevant for upregulation of endothelial nitric oxide synthase 1 and 3, necessary for proper endothelial cell proliferation, and that non-leukocyte domiciled midkine additionally improves vasodilation.
The data provided on the role of midkine in endothelial proliferation are likely to be relevant for both, the process of arteriogenesis and angiogenesis. Moreover, our data might help to estimate the therapeutic effect of clinically applied VEGFA in patients with vascular occlusive diseases.
Dysregulation of lysophosphatidic acids in multiple sclerosis and autoimmune encephalomyelitis
(2017)
Bioactive lipids contribute to the pathophysiology of multiple sclerosis. Here, we show that lysophosphatidic acids (LPAs) are dysregulated in multiple sclerosis (MS) and are functionally relevant in this disease. LPAs and autotaxin, the major enzyme producing extracellular LPAs, were analyzed in serum and cerebrospinal fluid in a cross-sectional population of MS patients and were compared with respective data from mice in the experimental autoimmune encephalomyelitis (EAE) model, spontaneous EAE in TCR1640 mice, and EAE in Lpar2 -/- mice. Serum LPAs were reduced in MS and EAE whereas spinal cord LPAs in TCR1640 mice increased during the ‘symptom-free’ intervals, i.e. on resolution of inflammation during recovery hence possibly pointing to positive effects of brain LPAs during remyelination as suggested in previous studies. Peripheral LPAs mildly re-raised during relapses but further dropped in refractory relapses. The peripheral loss led to a redistribution of immune cells from the spleen to the spinal cord, suggesting defects of lymphocyte homing. In support, LPAR2 positive T-cells were reduced in EAE and the disease was intensified in Lpar2 deficient mice. Further, treatment with an LPAR2 agonist reduced clinical signs of relapsing-remitting EAE suggesting that the LPAR2 agonist partially compensated the endogenous loss of LPAs and implicating LPA signaling as a novel treatment approach.
The composition of cellular membranes is extremely complex and the mechanisms underlying their homeostasis are poorly understood. Organelles within a eukaryotic cell require a non-random distribution of membrane lipids and a tight regulation of the membrane lipid composition is a prerequisite for the maintenance of specific organellar functions. Physical membrane properties such as bilayer thickness, lipid packing density and surface charge are governed by the lipid composition and change gradually from the early to the late secretory pathway. As the endoplasmic reticulum (ER) is situated at the beginning of the cells secretory pathway, it has to accept and accommodate a great variety and quantity of secretory and transmembrane proteins, which enter the ER on their way to their final cellular destination. Secretory proteins can be translocated into the lumen of the ER co- or posttanslationally and membrane proteins are being inserted and released into the ER membrane. In the oxidative milieu of the ER-lumen, supported by a variety of chaperones, proteins can fold into their native form.
If the folding capacity of the ER-lumen is exceeded, an accumulation of mis- or unfolded proteins in the lumen of the ER occurs, consequently triggering the unfolded protein response (UPR). This highly conserved program activates a wide-spread transcriptional response to restore protein folding homeostasis. In fact, 7 – 8% of all genes in the yeast Saccharomyces cerevisiae (S. cerevisiae) are regulated by the UPR. The mechanism underlying the activation of the UPR by protein folding stress has been investigated thoroughly in the last decades and many of its mechanistic details have been elucidated. Recently, it became evident that aberrant lipid compositions of the ER membrane, collectively referred to as lipid bilayer stress, are equally potent in activating the UPR. The underlying molecular mechanism of this membrane-activated UPR, however, remained unclear.
This study focuses on the UPR in S. cerevisiae and characterizes the inositol requiring enzyme 1 (Ire1) as the sole UPR sensor in S. cerevisiae. Active Ire1 forms oligomers and, collaboratively with the tRNA ligase Rlg1, splices immature mRNA of the transcription factor HAC1, which results in the synthesis of mature HAC1 mRNA and the production of the active Hac1 protein, which binds to UPR-elements in the nucleus and activates the expression of UPR target genes. Here, the combination of in vivo and in vitro experiments is being used, which is supplemented by molecular dynamics (MD) simulations performed by Roberto Covino and Gerhard Hummer (MPI for Biophysics, Frankfurt), aiming to identify the molecular mechanism of Ire1 activation by lipid bilayer stress. This study focuses on the analysis of the juxta- and transmembrane region of Ire1. Bioinformatic analyses revealed a putative ER-lumenal amphipathic helix (AH) N-terminally of and partially overlapping with the transmembrane helix (TMH). This predicted AH contains a large hydrophobic face, which inserts into the ER membrane, forcing the TMH into a tilted orientation within the membrane. The resulting unusual architecture of Ire1’s AH and TMH constitutes a unique structural element required for the activation of Ire1 by lipid bilayer stress.
To investigate the function of the AH in the physiological context, different variants of Ire1 were produced under the control of their endogenous promoter and from their endogenous locus. The functional role of the AH was tested, by disrupting its amphipathic character by the introduction of charged residues into the hydrophobic face of the AH. The role of a conserved negative residue between the TMH and the AH (E540 in S. cerevisiae) was tested by substituting it by a unipolar, polar, or positively charged residue. These variants were intensively characterized using a series of assays:
This thesis provides evidence that the AH is crucial for the function of Ire1: Mutant variants with a disrupted (F531R, V535R) or otherwise modified AH (E540A) exhibited a lower degree of oligomerization and failed to catalyze the splicing of the HAC1 mRNA as the Wildtype control. Likewise, the induction of PDI1, a target gene of the UPR, was greatly reduced in mutants with a disrupted or defective AH. These data revealed an important functional role of the AH for normal Ire1 function.
An in vitro system was established to analyze the membrane-mediated oligomerization of Ire1. This system enabled the isolated functional analysis of the AH and TMH during Ire1 activation by lipid bilayer stress. A fusion construct, coding for the maltose binding protein (MBP) from Escherichia coli (E. coli), N-terminally to the AH and TMH of Ire1 was produced. The heterologous production in E. coli, the purification and reconstitution of this minimal sensor of Ire1 in liposomes was established as part of this study. To analyze the oligomeric status of the minimal sensor in different lipid environments, continuous wave electron paramagnetic resonance (cwEPR) spectroscopic experiments were performed. These experiments revealed that the molecular packing density of the lipids had a significant influence of the oligomerization of the spin-labeled membrane sensor: increasing packing densities resulted in sensor oligomerization. The AH-disruptive F531R mutant, in which the amphipathic character of the AH was destroyed, showed no membrane-sensitive changes in its oligomerization status.
Thus, the activation of Ire1 by lipid bilayer stress is achieved by a membrane-based mechanism. According to the current model, the AH induces a local membrane compression by inserting its large hydrophobic face into the membrane. As membrane thickness and acyl chain order are interconnected, this compression simultaneously results in an increased local disordering of lipid acyl chains. Supporting MD simulations performed by Roberto Covino and Gerhard Hummer revealed that the bilayer compression is significantly more pronounced in a densely packed lipid environment, than in a lipid environment of lower lipid packing density. Hence, the energetic cost of the local compression increases with the packing density of the membrane, but is compensated for by the oligomerization of Ire1. This minimization of energetic cost induced by the membrane deformation of Ire1 forms the basis for the activation of Ire1 by lipid bilayer stress.
I analyze the real effects of the quality of the judicial enforcement by showing that an increase in the average duration of civil proceedings reduces firms' employment. I exploit a reorganization of court districts in Italy as an exogenous shock to court productivity and, using an instrumental variable approach, estimate an elasticity of employment to average trial length between -0.24 and -0.29. These results are very different from OLS estimates which do not control for endogeneity, and suggest that stronger law enforcement eases financing constraints. The effects are more pronounced in highly levered and more financially dependent firms, and appear to affect mainly firms in less financially developed areas. Revenues respond more slowly than employment to the reform, and wages fall as the judiciary improves. There is no evidence of effects on capital structure and profitability. These results offer a more complete picture of the interplay between legal institutions and real economic outcomes.
Regulation of α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptor trafficking in response to neuronal activity is critical for synaptic function and plasticity. Here, we show that neuronal activity induces the binding of ephrinB2 and ApoER2 receptors at the postsynapse to regulate de novo insertion of AMPA receptors. Mechanistically, the multi-PDZ adaptor glutamate-receptor-interacting protein 1 (GRIP1) binds ApoER2 and bridges a complex including ApoER2, ephrinB2, and AMPA receptors. Phosphorylation of ephrinB2 in a serine residue (Ser-9) is essential for the stability of such a complex. In vivo, a mutation on ephrinB2 Ser-9 in mice results in a complete disruption of the complex, absence of ApoER2 downstream signaling, and impaired activity-induced and ApoER2-mediated AMPA receptor insertion. Using compound genetics, we show the requirement of this complex for long-term potentiation (LTP). Together, our findings uncover a cooperative ephrinB2 and ApoER2 signaling at the synapse, which serves to modulate activity-dependent AMPA receptor dynamic changes during synaptic plasticity.
This paper aims to analyze the effects of financial constraints and the financial crisis on the financing and investment policies of newly founded firms. Thereby, the analysis adds important new insights on a crucial segment of the economy. We make use of a large and comprehensive data set of French firms founded in the years 2004-2006, i.e. well before the financial crisis. Our panel data analysis shows that the global financial crisis imposed a shock (mostly demand-driven) on the financing as well as on the investments of these firms. Moreover, we find that financially constrained firms use less external debt financing and invest smaller amounts. They also rely on less trade credit. With regard to bank financing, newly founded firms which are more financially constrained accumulate less bank debt and repay initial bank debt slower than their non-financially constraint counterparts. Finally, we find that financially constrained firms are affected to a smaller degree by the financial crisis than their less financially constrained counterparts.
Checkpoint kinase inhibitor AZD7762 strongly sensitises urothelial carcinoma cells to gemcitabine
(2017)
Background: More effective chemotherapies are urgently needed for bladder cancer, a major cause of morbidity and mortality worldwide. We therefore explored the efficacy of the combination of gemcitabine and AZD7762, a checkpoint kinase 1/2 (CHK1/2) inhibitor, for bladder cancer.
Methods: Viability, clonogenicity, cell cycle distribution and apoptosis were assessed in urothelial cancer cell lines and various non-malignant urothelial cells treated with gemcitabine and AZD7762. DNA damage was assessed by γH2A.X and 53-BP1 staining and checkpoint activation was followed by Western blotting. Pharmacological inhibition of CHK1 and CHK2 was compared to downregulation of either CHK1 or CHK2 using siRNAs.
Results: Combined use of gemcitabine and AZD7762 synergistically reduced urothelial carcinoma cell viability and colony formation relative to either single treatment. Non-malignant urothelial cells were substantially less sensitive to this drug combination. Gemcitabine plus AZD7762 inhibited cell cycle progression causing cell accumulation in S-phase. Moreover, the combination induced pronounced levels of apoptosis as indicated by an increase in the fraction of sub-G1 cells, in the levels of cleaved PARP, and in caspase 3/7 activity. Mechanistic investigations showed that AZD7762 treatment inhibited the repair of gemcitabine-induced double strand breaks by interference with CHK1, since siRNA-mediated depletion of CHK1 but not of CHK2 mimicked the effects of AZD7762.
Conclusions: AZD7762 enhanced sensitivity of urothelial carcinoma cells to gemcitabine by inhibiting DNA repair and disturbing checkpoints. Combining gemcitabine with CHK1 inhibition holds promise for urothelial cancer therapy.
Species of Mortoniella are revised for the northern and Andean part of the South American continent, including the countries of Bolivia, Peru, Ecuador, Colombia, Venezuela, and Guyana. All previously described species from the region are reillustrated and redescribed, except for Mortoniella santiaga Sykora, 1999 and M. quinuas Harper and Turcotte, 1985, whose types could not be located, and M. tranquilla Martynov, 1912, whose type is based on a female specimen and thus is currently unidentifiable. Included in the revision are 35 described species and 59 new species. Mortoniella similis Sykora, 1999 is considered a junior synonym of M. roldani Flint, 1991, and M. macuta (Botosaneanu, 1998) is considered a junior synonym of M. limona (Flint, 1981). A new subgenus, Nanotrichia, is recognized to accommodate species previously referred to as members of the ormina and velasquezi groups. Mexitrichia pacuara Flint, 1974 is designated the type species for the subgenus. Species previously referred to as members of the bilineata and leroda species groups are retained in the nominate subgenus, along with additional taxa not previously placed to species group, and treated within a number of subgroups. Previously described species of M. (Mortoniella) which are redescribed and reillustrated include: M. angulata Flint, 1963; M. apiculata Flint, 1963; M. atenuata (Flint, 1963); M. bifurcata Sykora, 1999; M. bilineata Ulmer, 1906; M. bolivica (Schmid, 1958); M. chicana Sykora, 1999; M. denticulata Sykora, 1999; M. elongata (Flint, 1963); M. enchrysa Flint, 1991; M. flinti Sykora, 1999; M. foersteri (Schmid, 1964); M. hodgesi Flint, 1963; M. iridescens Flint, 1991; M. leei (Flint, 1974); M. limona (Flint, 1981); M. marini (Rueda Martín and Gibon, 2008); M. paralineata Sykora, 1999; M. paraenchrysa Sykora, 1999; M. pocita (Flint, 1983); M. punensis (Flint, 1983); M. roldani Flint, 1991; M. simla (Flint, 1974); M. spinulata (Flint, 1991); M. squamata Sykora, 1999; M. unilineata Sykora, 1999; and M. wygodzinskii (Schmid, 1958). New species described in M. (Mortoniella), followed by their respective areas of distribution, include: M. acutiterga (Ecuador); M. adamsae (Peru); M. akrogeneios (Ecuador); M. applanata (Peru); M. auricularis (Colombia); M. barinasi (Venezuela); M. biramosa (Venezuela); M. bothrops (Peru); M. brevis (Ecuador, Venezuela); M. bulbosa (Peru); M. catherinae (Peru); M. chalalan (Peru); M. cornuta (Peru); M. cressae (Venezuela); M. croca (Peru); M. curtispina (Venezuela); M. curvistylus (Ecuador); M. dentiterga (Ecuador); M. dinotes (Peru); M. draconis (Ecuador); M. emarginata (Ecuador, Colombia); M. esrossi (Colombia); M. flexuosa (Colombia); M. furcula (Ecuador); M. gilli (Ecuador); M. gracilis (Venezuela); M. grandiloba (Venezuela); M. guyanensis (Guyana); M. hamata (Colombia); M. langleyae (Ecuador); M. longiterga (Ecuador); M. membranacea (Bolivia); M. monopodis (Colombia, Ecuador); M. parameralda (Ecuador); M. pica (Ecuador); M. proakantha (Ecuador); M. prolata (Peru); M. quadrispina (Ecuador); M. rectiflexa (Ecuador); M. ruedae (Bolivia); M. schlingeri (Colombia); M. silacea (Colombia, Ecuador); M. sinuosa (Bolivia, Peru); M. spatulata (Venezuela); M. tanyrhabdos (Venezuela); M. tridens (Peru); M. triramosa (Bolivia); M. tusci (Venezuela); and M. variabilis (Venezuela, Colombia). Species assigned to the subgenus M. (Nanotrichia) which are redescribed and reillustrated include: M. aequalis (Flint, 1963); M. aries (Flint, 1963); M. collegarum (Rueda Martín and Gibon, 2008); M. eduardoi (Rueda Martín and Gibon, 2008); M. macarenica (Flint, 1974); M. pacuara (Flint, 1974); M. usseglioi (Rueda Martín and Gibon, 2008); and M. velasquezi (Flint, 1991). Previously described species of Mortoniella, outside the area of coverage, that are transferred to the subgenus M. (Nanotrichia) include: M. alicula Blahnik and Holzenthal, 2011; M. bocaina Blahnik and Holzenthal, 2011; M. catarinensis (Flint, 1974); M. froehlichi Blahnik and Holzenthal, 2011; M. ormina (Mosely, 1939); M. rodmani Blahnik and Holzenthal, 2008; and M. tripuiensis Blahnik and Holzenthal, 2011. New species in the subgenus M. (Nanotrichia), followed by their respective areas of distribution, include: Mortoniella cognata (Ecuador, Venezuela); M. coheni (Ecuador); M. licina (Ecuador); M. paucispina (Peru); M. quadridactyla (Venezuela); M. simplicis (Venezuela); M. spangleri (Ecuador); M. triangularis (Ecuador); M. venezuelensis (Venezuela); and M. zamora (Ecuador). A key to the males of species from the region is also provided, as well as a key to females for the major subgroups and a species key to females of the velasquezi group. Finally, a partially resolved phylogeny of the species is presented, along with a discussion of evolutionary trends within the genus.
Distributional records of the 177 tiger beetle species and subspecies known for Vietnam are given together with a key and habitus photos (Coleoptera: Carabidae: Cicindelinae). Tricondyla (Tricondyla) macrodera abruptesculpta Horn, 1925, Protocollyris festiva Naviaux, 2008, Neocollyris (Brachycollyris) purpureomaculata borea Naviaux, 1994, Neocollyris (Brachycollyris) torosa Naviaux, 2010, Neocollyris (Leptocollyris) rogeri Shook and Wu, 2006, Neocollyris (Leptocollyris) laosensis Naviaux, 1999, Neocollyris (Stenocollyris) rubens (Bates, 1878), Neocollyris (Pachycollyris) tricolor Naviaux, 1991, Neocollyris (Pachycollyris) panfi lovi Naviaux and Matalin, 2002, Therates rugulosus Horn, 1900, Therates bannapecolus Sawada and Wiesner, 1999, Calochroa interruptofasciata fl avolineata (Chaudoir, 1865), Cylindera (Ifasina) cyclobregma Acciavatti and Pearson, 1989, Cylindera (Ifasina) decolorata (Horn, 1907), Cylindera (Ifasina) humillima (Gestro, 1893) and Cylindera (Eugrapha) elisae elisae (Motschulsky, 1859) are reported for the fi rst time in the fauna of Vietnam. Neocollyris (Isocollyris) septentrionalis Naviaux, 1999, Neocollyris (Leptocollyris) linearis tenuicornis (Chaudoir, 1864), Neocollyris (Pachycollyris) aptera apicalis (Chaudoir, 1864), Neocollyris (Pachycollyris) contracta (Horn, 1905), Therates dimidiatus wallacei Thomson, 1857, Cylindera (Cylindera) pseudocylindriformis Horn, 1913, Cylindera (Ifasina) viridilabris (Chaudoir, 1852), Cylindera (Ifasina) psilica psilica (Bates, 1866), Cylindera (Eugrapha) venosa (Kollar, 1836) and Myriochila (Myriochila) undulata (Dejean, 1825) are excluded from the fauna of Vietnam
Species of Mortoniella are revised for the northern and Andean part of the South American continent, including the countries of Bolivia, Peru, Ecuador, Colombia, Venezuela, and Guyana. All previously described species from the region are reillustrated and redescribed, except for Mortoniella santiaga Sykora, 1999 and M. quinuas Harper and Turcotte, 1985, whose types could not be located, and M. tranquilla Martynov, 1912, whose type is based on a female specimen and thus is currently unidentifiable. Included in the revision are 35 described species and 59 new species. Mortoniella similis Sykora, 1999 is considered a junior synonym of M. roldani Flint, 1991, and M. macuta (Botosaneanu, 1998) is considered a junior synonym of M. limona (Flint, 1981). A new subgenus, Nanotrichia, is recognized to accommodate species previously referred to as members of the ormina and velasquezi groups. Mexitrichia pacuara Flint, 1974 is designated the type species for the subgenus. Species previously referred to as members of the bilineata and leroda species groups are retained in the nominate subgenus, along with additional taxa not previously placed to species group, and treated within a number of subgroups. Previously described species of M. (Mortoniella) which are redescribed and reillustrated include: M. angulata Flint, 1963; M. apiculata Flint, 1963; M. atenuata (Flint, 1963); M. bifurcata Sykora, 1999; M. bilineata Ulmer, 1906; M. bolivica (Schmid, 1958); M. chicana Sykora, 1999; M. denticulata Sykora, 1999; M. elongata (Flint, 1963); M. enchrysa Flint, 1991; M. flinti Sykora, 1999; M. foersteri (Schmid, 1964); M. hodgesi Flint, 1963; M. iridescens Flint, 1991; M. leei (Flint, 1974); M. limona (Flint, 1981); M. marini (Rueda Martín and Gibon, 2008); M. paralineata Sykora, 1999; M. paraenchrysa Sykora, 1999; M. pocita (Flint, 1983); M. punensis (Flint, 1983); M. roldani Flint, 1991; M. simla (Flint, 1974); M. spinulata (Flint, 1991); M. squamata Sykora, 1999; M. unilineata Sykora, 1999; and M. wygodzinskii (Schmid, 1958). New species described in M. (Mortoniella), followed by their respective areas of distribution, include: M. acutiterga (Ecuador); M. adamsae (Peru); M. akrogeneios (Ecuador); M. applanata (Peru); M. auricularis (Colombia); M. barinasi (Venezuela); M. biramosa (Venezuela); M. bothrops (Peru); M. brevis (Ecuador, Venezuela); M. bulbosa (Peru); M. catherinae (Peru); M. chalalan (Peru); M. cornuta (Peru); M. cressae (Venezuela); M. croca (Peru); M. curtispina (Venezuela); M. curvistylus (Ecuador); M. dentiterga (Ecuador); M. dinotes (Peru); M. draconis (Ecuador); M. emarginata (Ecuador, Colombia); M. esrossi (Colombia); M. flexuosa (Colombia); M. furcula (Ecuador); M. gilli (Ecuador); M. gracilis (Venezuela); M. grandiloba (Venezuela); M. guyanensis (Guyana); M. hamata (Colombia); M. langleyae (Ecuador); M. longiterga (Ecuador); M. membranacea (Bolivia); M. monopodis (Colombia, Ecuador); M. parameralda (Ecuador); M. pica (Ecuador); M. proakantha (Ecuador); M. prolata (Peru); M. quadrispina (Ecuador); M. rectiflexa (Ecuador); M. ruedae (Bolivia); M. schlingeri (Colombia); M. silacea (Colombia, Ecuador); M. sinuosa (Bolivia, Peru); M. spatulata (Venezuela); M. tanyrhabdos (Venezuela); M. tridens (Peru); M. triramosa (Bolivia); M. tusci (Venezuela); and M. variabilis (Venezuela, Colombia). Species assigned to the subgenus M. (Nanotrichia) which are redescribed and reillustrated include: M. aequalis (Flint, 1963); M. aries (Flint, 1963); M. collegarum (Rueda Martín and Gibon, 2008); M. eduardoi (Rueda Martín and Gibon, 2008); M. macarenica (Flint, 1974); M. pacuara (Flint, 1974); M. usseglioi (Rueda Martín and Gibon, 2008); and M. velasquezi (Flint, 1991). Previously described species of Mortoniella, outside the area of coverage, that are transferred to the subgenus M. (Nanotrichia) include: M. alicula Blahnik and Holzenthal, 2011; M. bocaina Blahnik and Holzenthal, 2011; M. catarinensis (Flint, 1974); M. froehlichi Blahnik and Holzenthal, 2011; M. ormina (Mosely, 1939); M. rodmani Blahnik and Holzenthal, 2008; and M. tripuiensis Blahnik and Holzenthal, 2011. New species in the subgenus M. (Nanotrichia), followed by their respective areas of distribution, include: Mortoniella cognata (Ecuador, Venezuela); M. coheni (Ecuador); M. licina (Ecuador); M. paucispina (Peru); M. quadridactyla (Venezuela); M. simplicis (Venezuela); M. spangleri (Ecuador); M. triangularis (Ecuador); M. venezuelensis (Venezuela); and M. zamora (Ecuador). A key to the males of species from the region is also provided, as well as a key to females for the major subgroups and a species key to females of the velasquezi group. Finally, a partially resolved phylogeny of the species is presented, along with a discussion of evolutionary trends within the genus.
Genera of Cephaloscymnini (Coleoptera: Coccinellidae: Coccidulinae) are discussed and a key to all recognized genera and species is provided. Succinctonotum, new genus, is proposed. Scymnus laboulbenii Mulsant and Prodilis maculata Weise are transferred to Neaporia as new combinations. Prodiloides bipunctata Weise, and Neaporia compta are transferred to Prodilis as new combinations. Neaporia cuprea Gorham is considered a junior synonym of Neaporia viridiscens Gorham and Cephaloscymnus bruchi Weise a junior synonym of Prodilis volgus Mulsant. New species described in Cephaloscymnus are C. beulah, C. candice, C. juanita. New species described in Neaporia are N. becky, N. bobbie, N. brandy, N. carole, N. cassandra, N. christy, N. daisy, N. deanna, N. dianne, N. felicia, N. gwendolyn, N. hilda, N. irma, N. jennie, N. jenny, N. kay, N. kayla, N. kristine, N. leah, N. lena, N. leona, N. longifrons, N. mabel, N. mae, N. margie, N. marsha, N. miriam, N. misty, N. myrtle, N. naomi, N. nina, N. nora, N. olga, N. opal, N. patsy, N. penny, N. priscilla, N. shelley, N. sonia, N. tracey, and N. violet. New species described in Succinctonotum is S. frosti. New species described in Prodilis are P. ada, P. alberta, P. alison, P. amelia, P. angie, P. araguaensis, P. bartletti, P. belinda, P. blanche, P. brandi, P. cecilia, P. claire, P. cora, P. dubitalis, P. erika, P. eunice, P. fannie, P. faye, P. flora, P. geneva, P. guadalupe, P. harriet, P. hattie, P. inez, P. iris, P. isabel, P. jan, P. janie, P. joanna, P. jodi, P. katrina, P. kristi, P. kristy, P. lindsey, P. lola, P. lula, P. lynda, P. madeline, P. maggie, P. mamie, P. margarita, P. maryann, P. melody, P. molly, P. monique, P. natasha, P. olivia, P. pecki, P. ramona, P. rosie, P. sabrina, P. sandy, P. shelley, P. sherri, P. sheryl, P. sonya, P. susie, and P. yvette. Ponaria, new genus of Coccidulini is proposed. Neaporia caerulea Gorham is transferred to Ponaria as a new combination. New species described in Ponaria are P. daviesi, P. hurtadoi, and P. paprzyckii. Lectotypes are here designated for Neaporia arrowi, N. coelestis, N. metallica, N. guatemalana, N. indagator, and Prodilis pallidifrons.
A new cryptic species, Aleochara (Xenochara) castaneimarmotae Klimaszewski, Webster, and Brunke, new species (Coleoptera: Staphylinidae: Aleocharinae), associated with Marmota monax (Linnaeus) burrows and caves in eastern North America, is described and illustrated. A key to Canadian species of subgenus Xenochara Mulsant and Rey and revised distributions of the taxonomically difficult fumata species group are provided. Aleochara quadrata Sharp is recorded from Washington and Oregon for the first time.
El pulgón Sarucallis kahawaluokalani (Kirkaldy) conocido comúnmente como pulgón del árbol de júpiter, se reporta por primera vez para Guatemala. Esta especie de la familia Aphididae (Hemiptera) fue encontrada en Lagerstroemia indica (Lythraceae). También se presenta la información básica de la especie así como una diagnosis para identificarla.
Se redescribe el género Ogyges Kaup, 1871 (Coleoptera: Passalidae), incluyendo su historia taxonó- mica. Se presentan las imágenes, los datos registrados en las etiquetas, las coordenadas geográficas, mediciones, comentarios taxonómicos y las instituciones depositarias de 19 tipos primarios que fueron descritos o que están incluidos dentro del género Ogyges Kaup. El nombre infrasubespecífico Ogyges laevior ab. vinculotaenia Kuwert, 1897, está indisponible, de acuerdo al artículo 45.6.2 del ICZN.
Many nomenclatural changes are implemented in the beetle families Georissidae, Histeridae, Hydraenidae, Hydrochidae, Hydrophilidae, Ptiliidae, Leiodidae and especially Staphylinidae, of the beetle series Staphyliniformia (Coleoptera), in preparation for making a world catalog of this group available online. Limited taxonomic changes are also made in the staphylinid subfamilies Osoriinae and Staphylininae.
At the level of family-group taxa, Article 29.4 of the current (1999) Zoological Code is reviewed and the original spellings of two tribal names, Nymphisterini Tishechkin (Histeridae) and Cryptonotopsisini Pace (Staphylinidae), are resurrected. The tribal name Stictocraniini Jakobson (Staphylinidae) is also resurrected as the valid name for its new synonym Fenderiini Scheerpeltz.
Changes at the genus-group level in Histeridae include placing Contipus Marseul as a new synonym of Hister Linnaeus due to the current placement of its validly designated type species C. subquadratus Marseul; proposal of Contipides Newton gen. nov. (type species Contipus digitatus Marseul) for the 10 species that had remained in Contipus of authors; and new designation of Idolia laevigata Lewis as type species of Idolia Lewis. In Ptiliidae, Rodwayia ovata Lea is newly designated as type species of Rodwayia Lea, and Throscidium germainii Matthews is newly designated as type species of Throscidium Matthews. In Staphylinidae, Paramichrotus Naomi is resurrected as a valid subgenus of Hesperosoma Scheerpeltz with Hemihesperosoma Hayashi placed as a new synonym of it; Sonoma corticina Casey is reaffi rmed as the type species of Sonoma Casey in place of Faronus tolulae LeConte; Stanosthetus Dejean is recognized as an available name and junior synonym of Euplectus Kirby; Taplandria Pace (type species T. guyanensis Pace) is recognized as a junior homonym and new synonym of Taplandria Pace (type species T. fl ava Pace); and Termitobiella Wasmann is resurrected as the valid name for the genus Felda Blackwelder. Replacement names for preoccupied generic or subgeneric names include in Histeridae Bellatricides Newton nom. nov. for Pachylister (Bellatrix) Mazur, junior homonym of Bellatrix Boie; and in Staphylinidae Foxiides Newton nom. nov. for Foxia Pace, junior homonym of Foxia Ashmead, and Xenasterides Newton nom. nov. for Xenaster Bierig, junior homonym of Xenaster Simonwitsch. Taxonomic changes at the generic level in Staphylinidae include proposal of Prolibia Newton gen. nov. (type species Lispinus californicus LeConte) for four Nearctic species recently placed in Clavilispinus Bernhauer; placement of Heterotrochinus Coiffait and its synonym Heterotrochus Coiffait as new synonyms of Eulibia Cameron; placement of the generic or subgeneric names Chapmaniella Bernhauer, Glenothorax Bierig, Euryolinus Bernhauer and Plesiolinus Bernhauer as new synonyms of Platydracus Thomson; and transfer of the subgenus Poikilodracus Scheerpeltz from Staphylinus Linnaeus to Platydracus. First reviser actions are used to select Georissites Ponomarenko (Georissidae) as the correct original spelling over the alternate original spelling Georyssites, and Kyrtusa Pace (Staphylinidae) as correct original spelling over Kirtusa.
Several hundred nomenclatural and taxonomic changes at the species group level are briefl y summarized here but are too numerous to list completely. Replacement names for preoccupied species or subspecies names in current use are proposed in Histeridae (3), Hydrochidae (1), Hydrophilidae (1), Leiodidae (2), Ptiliidae (3) and Staphylinidae (180); an additional staphylinid replacement name, Phloeopora nilgiriensis, is newly proposed by G. Paśnik. New or resurrected combinations are proposed for either nomenclatural or taxonomic reasons in the following genera (with indication of how many names in each genus): in Histeridae, Contipides Newton (10); in Staphylinidae, Abemus Mulsant and Rey (4), Allotrochus Fagel (6), Atheta Thomson (1), Cheilocolpus Solier (4), Eulibia Cameron (4), Foxiides Newton (1), Lispinus Erichson (3), Loncovilius Germain (2), Nacaeus Blackwelder (119), Naddia Fauvel (1), Neohypnus Coiffait and Sáiz (8), Neolosus Blackwelder (1), Ocypus Leach (2), Ontholestes Ganglbauer (1), Platydracus Thomson (59), Prolibia Newton (4) Termitobiella Wasmann (10), Thyreocephalus Guérin-Méneville (4), Xenasterides Newton (1), and Zeoleusis Steel (3). First reviser actions are used to resolve the correct original spellings (of two or more original spellings) of two species of Hydraena Kugelann (Hydraenidae) and 21 species of Staphylinidae. Changes in priority or availability of names are cited to establish the following names as valid over one or more new synonyms each: Acrotrichis rotundata (Haldeman) and Acrotrichis glabricollides Newton sp. nov. in Ptiliidae, Nemadiopsis franki Perreau in Leiodidae, and Gyrophaena nigra Kraatz, Heterothops fumigatus LeConte, Loncovilius germaini (Scheerpeltz), Philonthus upotovus Newton, sp. nov., Stenus fulviventris Rougemont, and nine species of Homalota Mannerheim in Staphylinidae. Finally, the species Eleusis lata Coiffait and Eleusis microlestiformis Coiffait are noted as not belonging to the genus Eleusis Laporte de Castelnau or to Staphylinidae, and are transferred without generic assignment to the subfamily Inopeplinae of the family Salpingidae.
The tribe Zolini (Carabidae: Trechinae) is revised for New Zealand. Two subtribes, fi ve genera, and fortyeight species are recognized. The presence of the subtribe Merizodina is confi rmed for New Zealand; it includes three genera (Maungazolus n. gen., Pseudoopterus Csiki, 1928, and Synteratus Broun, 1909). The subtribe Zolina contains two genera (Oopterus Guérin-Méneville, 1841 and Zolus Sharp, 1886).
One genus and twenty-fi ve species are described as new: Maungazolus n. gen.; Maungazolus acutus n. sp., Maungazolus priestleyensisn. sp., Maungazolus ranatungaen. sp., Maungazolus septempunctatus n. sp., Maungazolus tararuaensisn. sp., Oopterus anglemensisn. sp., Oopterus arthurensisn. sp., Oopterus corvinki n. sp., Oopterus discoideus n. sp., Oopterus garnerae n. sp., Oopterus marrisin. sp., Oopterus mohiensis n. sp., Oopterus monticola n. sp., Oopterus nanus n. sp., Oopterus nunni n. sp., Oopterus palmai n. sp., Oopterus punctatus n. sp., Oopterus quadripunctatus n. sp., Oopterus taieriensis n. sp., Oopterus trechoides n. sp., Pseudoopterus fi ordlandensis n. sp., Pseudoopterus otiraensis n. sp., Zolus kauriensis n. sp., Zolus unisetosus n. sp., Zolus wongi n. sp.
Lectotypes are designated for Zolus helmsi Sharp, 1886 and Oopterus parvulus Broun, 1903.
Seven taxa are reinstated as valid genera and previous combinations: Zolus Sharp, 1886 and Pseudoopterus Csiki, 1928 (previously synonymized with Oopterus Guérin-Méneville,1841); Oopterus carinatus Broun, 1882 = Zolus carinatus (Broun, 1882); Oopterus helmsi (Sharp, 1886) = Zolus helmsi Sharp, 1886; Oopterus latipennis Broun, 1903 = Pseudoopterus latipennis (Broun, 1903); Oopterus plicaticollis Blanchard, 1843 = Pseudoopterus plicaticollis (Blanchard, 1843); Oopterus subopacus (Broun, 1915) = Zolus subopacus Broun, 1915.
Three new combinations are established: Oopterus pallidipes Broun, 1893 = Maungazolus pallidipes (Broun, 1893); Oopterus parvulus Broun, 1903 = Maungazolus parvulus (Broun, 1903); Oopterus pygmeatus Broun, 1907 = Maungazolus pygmeatus (Broun, 1907).
Eleven new synonymies are established: Oopterus basalis Broun, 1915 and Oopterus minor Broun, 1917 = Maungazolus pygmeatus (Broun, 1907); Oopterus nigritulus Broun, 1908 and Oopterus laevigatus Broun, 1912 = Oopterus sobrinus Broun, 1886; Oopterus sculpturatus ovinotatus Broun, 1908 = Oopterus sculpturatus Broun, 1908; Oopterus probus Broun, 1903 and Oopterus latifossus Broun, 1917 = Pseudoopterus latipennis (Broun, 1903); Oopterus puncticeps Broun, 1893 = Oopterus laevicollis Bates, 1871; Zolus atratus Broun, 1893 and Zolus femoralis Broun, 1894 = Zolus carinatus (Broun, 1882); Zolus labralis Broun, 1921 = Zolus helmsi Sharp, 1886.
A revision of all taxa is provided. Descriptions, identifi cation keys, illustrations of male genitalia, habitus photos, distributional data and maps are given. Extensive information on ecology, biology, dispersal power, and collecting techniques is included for each species.
Species of Hydrosmecta C. G. Thomson, occurring in eastern Canada, are studied and reviewed. Six species are recognized, and two of them are described as new to science. The new species are: Hydrosmecta canadensis Webster and Klimaszewski, new species, and Hydrosmecta minutissimoides Webster and Klimaszewski, new species. Two species described in the USA are recorded from Canada and New Brunswick for the first time: Hydrosmecta caduca Casey and Hydrosmecta dulcis Casey. New distribution and collection data, diagnoses, a key for species identification, and images of habitus and genital structures are provided. Hydrosmecta newfoundlandica Klimaszewski and Langor, 2011, is transferred to the genus Atheta Thomson based on morphology of genital structures.
This paper revises the genus Ganelius Benesh, which is endemic to Madagascar, in the stag beetle tribe Figulini Burmeister (Coleoptera: Lucanidae: Lucaninae). Species in the genus are striking in their highly sexually dimorphic mandibles, a character that rarely occurs in the tribe. The genus was previously comprised of four species, but three of these names were problematic or questionably applied. A lectotype is designated for G. madagascariensis Laporte, a neotype is designated for Ganelius oberndorferi Nonfried, and Nigidius passaliformis Benesh is newly synonymized with G. oberndorferi. Two new species, G. gnamptus Paulsen and G. zombi Paulsen, are described from western Madagascar. The identity of the overlooked Ganelius nageli (Kriesche) is fixed through a neotype designation, and the species is moved to the new genus Agnelius, which is distinguished from Ganelius by a lack of sexual dimorphism, serrate protibiae, and a more flattened body.
New genera and species of mimetic Cleridae from Mexico and Central America (Coleoptera: Cleroidea)
(2017)
New genera and species of putatively mimetic Cleridae (Coleoptera: Cleroidea) are described from Mexico and Central America: Namba testacea, new genus and species from Nuevo León, Mexico; Aulicoides leavengoodi, new genus and species from Jalisco, Mexico; and Quadrophenia, new genus, which includes Q. townshendi, new species, from Mexico, Nicaragua, Costa Rica and Panama, Q. mooni, new species, from Costa Rica, Q. entwistlei, new species, from Guatemala and Honduras, Q. daltreyi, new species, from Costa Rica, and Q. sumidero new species, from Chiapas, Mexico. A key to the species of Quadrophenia is provided. All of the newly described species are hypothesized to be Batesian mimics of aposematically colored coleopteran models, some of which are known to be chemically protected.
A systematic redefinition of the species belonging to the genus Geomyphilus Gordon and Skelley, 2007 (Coleoptera: Scarabaeidae: Aphodiinae) of Mexico and neighboring countries is presented. The new species G. tuzincola of Mexico is described and figured. The new combination Coelotrachelus macgregori (Islas, 1955) is proposed.
Adesmus martinsi (Coleoptera, Cerambycidae, Lamiinae, Hemilophini), a new species from Bolivia, is described, illustrated, and included in a previous key. The new species displays gender dimorphism in the pubescent pattern and in anatomical structure. Thus, Adesmus becomes the second genus recorded in the Hemilophini to have visual chromatic dimorphism.
A preliminary catalogue of the moths (Lepidoptera except Papilionoidea) of Tobago, West Indies
(2017)
This catalogue comprises records of 355 species of moths (non-papilionoid Lepidoptera) from Tobago, of which 15 are partially identified. Of this total, all except 17 (5%) are known from Trinidad, although not all these records from Trinidad are published yet. Of these 17, eleven are expected to occur in Trinidad as they also occur on the mainland of South America and two are only known from Tobago but will probably also occur in Trinidad. This leaves just four species (1% of the total) that are known from the Lesser Antilles and are currently not known from further south than Tobago. The families represented by the most species are Erebidae, Crambidae, Geometridae, Noctuidae and Sphingidae, which between them account for 73% of records. Taxonomic changes are made as follows. Podalia farmbri (Kaye, 1925) sp. rev. (Megalopygidae) is removed from the synonymy of P. nigrescens Schaus, 1905. Podalia walkeri Hopp, 1935 and P. dimidiata (Walker, 1865) are syn. nov. of P. farmbri Kaye, 1925. Renia bipunctata (Kaye, 1901) (Erebidae) is a comb. nov. for Zanclognatha bipunctata. Aristaria trinitalis Schaus, 1906 (Erebidae) is a syn. nov. of Renia bipunctata Kaye, 1901. Aglaonice deldonalis Walker, 1859 sp. rev. (Erebidae) is removed from the synonymy of A. hirtipalpis Walker, [1859]. Plusiodonta cupristria Kaye, 1923 (Erebidae) is a syn. nov. of Oraesia excitans Walker [1858]. Oroscopa abluta (Schaus, 1912) (Erebidae) is a comb. nov. for Freilla abluta Schaus, 1912, which is a new combination in common use, but not previously published. Ptichodis dorsalis (Fabricius, 1797) (Erebidae) is a comb. nov. for Noctua auct. dorsalis Fabricius, a new combination already in use, but not formally published. I endorse the unpublished conclusion of I.W.B. Nye that Ptichodis basilans (Guenée, 1852) is a syn. nov. of Ptichodis dorsalis (Fabricius, 1797). Ptichodis agrapta Hampson, 1913 is also a syn. nov. of Ptichodis dorsalis (Fabricius, 1797).
Se describe con medidas, dibujos e imágenes obtenidas con microscopio compuesto, una nueva especie de mosca blanca, Tetraleurodes dorsibandas Sánchez y Carapia sp. nov. (Hemiptera: Aleyrodidae) que se encontró alimentándose de Casimiroa edulis (Rutaceae) y Ehretia tinifolia (Boraginaceae) en Morelos y Oaxaca (México), respectivamente. La especie se diferencia de Tetraleurodes perileuca (Cockerell) por tener el raquis en forma de bandas, presentar estructuras en forma de mosaico irregular en la parte media de los segmentos abdominales y la presencia de setas cefálicas. Se proporciona una clave de las especies de México y se enlistan las especies del nuevo mundo.
Thirty-one species of mealybugs (Hemiptera: Pseudococcidae) are reported from South Korea based upon monitoring surveys conducted from 2010 to 2016, along with a dichotomous key to separate them. Six species, Nipaecoccus nipae (Maskell), Palmicultor lumpurensis (Takahashi), Planococcus citri (Risso), Pseudococcus dendrobiorum Williams, Pseudococcus longispinus (Targioni-Tozzetti), and Pseudococcus orchidicola Takahashi, known only to occur in greenhouses, are considered as adventive mealybug species to South Korea; of these, P. citri has already established in the exterior environment in South Korea.
New state records for 49 species of Eucnemidae (Coleoptera) are reported throughout the United States and a single species is newly reported from Utah. Diagnostic remarks are offered for Xylophilus crassicornis Muona and distributional observations are discussed for Dirrhagofarsus lewisi. The importance of retaining by-catch from statewide, regional, and national surveys for future studies is also discussed.
A statewide survey of Wisconsin’s Nemonychidae and Anthribidae (Coleoptera: Curculionoidea) was conducted over one full (2012) and two partial (2011, 2013) fi eld seasons. Specimens were collected using a variety of techniques. Two species of the nemonychid genus Cimberis and 22 species of Anthribidae in 13 genera are now confi rmed. Generic and species-level keys for Wisconsin species are provided along with generic and species diagnoses. Species treatments also include a synonymy, a description, and information on natural history, phenology, distribution and collecting methods. Dorsal and lateral habitus images are also provided for most of the species.
Tragosoma soror (Coleoptera: Cerambycidae: Prioninae), a new Nearctic species, is described and compared to its North American congeners. Tragosoma harrisii LeConte, revised status, and Tragosoma spiculum Casey, revised status are both resurrected from synonymy and considered valid species distinct from T. depsarium (Linnaeus). The Mexican T. nigripenne Bates is confi rmed as a valid species. Tragosoma chiricahuae Linsley, new synonym, is placed in synonymy under T. spiculum Casey, and T. sodale Casey, new synonym, T. parvicolle Casey, new synonym, and T. repens Casey new synonym are placed in synonymy under T. harrisii. Tragosoma repens is a junior objective synonym of T. parvicolle. A lectotype is designated for T. sodale. An updated synonymical and distributional checklist of Tragosoma of the world is provided.
We propose a model for measuring the runtime of concurrent programs by the minimal number of evaluation steps. The focus of this paper are improvements, which are program transformations that improve this number in every context, where we distinguish between sequential and parallel improvements, for one or more processors, respectively. We apply the methods to CHF, a model of Concurrent Haskell extended by futures. The language CHF is a typed higher-order functional language with concurrent threads, monadic IO and MVars as synchronizing variables. We show that all deterministic reduction rules and 15 further program transformations are sequential and parallel improvements. We also show that introduction of deterministic parallelism is a parallel improvement, and its inverse a sequential improvement, provided it is applicable. This is a step towards more automated precomputation of concurrent programs during compile time, which is also formally proven to be correctly optimizing.
Der viersemestrige Master-Studiengang Biochemie leitet sich aus der langjährigen Tradition in biomolekularer Forschung und Lehre in der Frankfurter Forschungslandschaft her und ist stark forschungsorientiert.
Ziel des Studienganges ist es, fachliche Kenntnisse, Fähigkeiten und Methodenkompetenzen zu vermitteln, mit denen die Absolventen in die Lage versetzt werden, in einem forschungsbezogenem Kontext selbstständig zu arbeiten.
Inhaltlich erstreckt sich der Studiengang von zellulärer Biochemie über Strukturbiologie bis hin zur Biophysik/Biophysikalischen Chemie und ermöglicht den Studierenden die Setzung individueller Schwerpunkte. Für eine forschungsnahe Ausbildung auf hohem Niveau ist der Studiengang integral mit dem lokalen Forschungsumfeld verknüpft, was neben dem Heimatfachbereich Biochemie / Chemie / Pharmazie auch die Fachbereiche Physik, Biowissenschaften, Medizin als auch außeruniversitäre Institutionen wie das Max-Planck-Institut für Biophysik und das Paul-Ehrlich-Institut involviert. Den besonderen Frankfurter Schwerpunkten Strukturbiologie und Membranproteinforschung wird im Studiengang Rechnung getragen.
Das Masterstudium am hochmodernen Life-Science Campus der Goethe-Universität bietet in einer einzigartigen Mischung aus Theorie und Praxis in Biochemie und Biophysikalischer Chemie das Rüstzeug für eine Karriere in der universitären sowie industriellen Umgebung. Die Beteiligung diverser Forschungsinstitute am Masterprogramm ermöglicht eine Spezialisierung in Immunologie, Tumorbiologie oder in Membranbiochemie. Die starke Vernetzung der Universität in nationale sowie internationale Forschungsverbünde gewährleistet den Studierenden einen engen Kontakt mit international führenden Wissenschaftlern und die Möglichkeit zu weltweiten Forschungsaufenthalten. ...
Catecholaminergic polymorphic ventricular tachycardia (CPVT) is a condition of abnormal heart rhythm (arrhythmia), induced by physical activity or stress. Mutations in ryanodine receptor 2 (RyR2), a Ca2+ release channel located in the sarcoplasmic reticulum (SR), or calsequestrin 2 (CASQ2), a SR Ca2+ binding protein, are linked to CPVT. For specific drug development and to study distinct arrhythmias, simple models are required to implement and analyze such mutations. Here, we introduced CPVT inducing mutations into the pharynx of Caenorhabditis elegans, which we previously established as an optogenetically paced heart model. By electrophysiology and video-microscopy, we characterized mutations in csq-1 (CASQ2 homologue) and unc-68 (RyR2 homologue). csq-1 deletion impaired pharynx function and caused missed pumps during 3.7 Hz pacing. Deletion mutants of unc-68, and in particular the point mutant UNC-68(R4743C), analogous to the established human CPVT mutant RyR2(R4497C), were unable to follow 3.7 Hz pacing, with progressive defects during long stimulus trains. The pharynx either locked in pumping at half the pacing frequency or stopped pumping altogether, possibly due to UNC-68 leakiness and/or malfunctional SR Ca2+ homeostasis. Last, we could reverse this ‘worm arrhythmia’ by the benzothiazepine S107, establishing the nematode pharynx for studying specific CPVT mutations and for drug screening.
Background: Malaria remains one of the most serious infections for travellers to tropical countries. Due to the lack of harmonized guidelines a large variety of treatment regimens is used in Europe to treat severe malaria.
Methods: The European Network for Tropical Medicine and Travel Health (TropNet) conducted an 8-year, multicentre, observational study to analyse epidemiology, treatment practices and outcomes of severe malaria in its member sites across Europe. Physicians at participating TropNet centres were asked to report pseudonymized retrospective data from all patients treated at their centre for microscopically confirmed severe Plasmodium falciparum malaria according to the 2006 WHO criteria.
Results: From 2006 to 2014 a total of 185 patients with severe malaria treated in 12 European countries were included. Three patients died, resulting in a 28-day survival rate of 98.4%. The majority of infections were acquired in West Africa (109/185, 59%). The proportion of patients treated with intravenous artesunate increased from 27% in 2006 to 60% in 2013. Altogether, 56 different combinations of intravenous and oral drugs were used across 28 study centres. The risk of acute renal failure (36 vs 17% p = 0.04) or cerebral malaria (54 vs 20%, p = 0.001) was significantly higher in patients ≥60 years than in younger patients. Respiratory distress with the need for mechanical ventilation was significantly associated with the risk of death in the study population (13 vs 0%, p = 0.001). Post-artemisinin delayed haemolysis was reported in 19/70 (27%) patients treated with intravenous artesunate.
Conclusion: The majority of patients with severe malaria in this study were tourists or migrants acquiring the infection in West Africa. Intravenous artesunate is increasingly used for treatment of severe malaria in many European treatment centres and can be given safely to European patients with severe malaria. Patients treated with intravenous artesunate should be followed up to detect and manage late haemolytic events.
Progressive neurodegenerative diseases plague millions of individuals both in the United States and across the world. The current pathology of progressive neurodegenerative tauopathies, such as Alzheimer’s disease (AD), Pick’s disease, frontotemporal dementia (FTD), and progressive supranuclear palsy, primarily revolves around phosphorylation and hyperphosphorylation of the tau protein. However, more recent evidence suggests acetylation of tau protein at lysine 280 may be a critical step in molecular pathology of these neurodegenerative diseases prior to the tau hyperphosphorylation. Secondary injury cascades such as oxidative stress, endoplasmic reticulum stress, and neuroinflammation contribute to lasting damage within the brain and can be induced by a number of different risk factors. These injury cascades funnel into a common pathway of early tau acetylation, which may serve as the catalyst for progressive degeneration. The post translational modification of tau can result in production of toxic oligomers, contributing to reduced solubility as well as aggregation and formation of neurofibrillary tangles, the hallmark of AD pathology. Chronic Traumatic Encephalopathy (CTE), caused by repetitive brain trauma is also associated with a hyperphosphorylation of tau. We postulated acetylation of tau at lysine 280 in CTE disease could be present prior to the hyperphosphorylation and tested this hypothesis in CTE pathologic specimens. We also tested for ac-tau 280 in early stage Alzheimer’s disease (Braak stage 1). Histopathological examination using the ac tau 280 antibody was performed in three Alzheimer's cases and three CTE patients. Presence of ac-tau 280 was confirmed in all cases at early sites of disease manifestation. These findings suggest that tau acetylation may precede tau phosphorylation and could be the first "triggering" event leading to neuronal loss. To the best of our knowledge, this is the first study to identify acetylation of the tau protein in CTE. Prevention of tau acetylation could possibly serve as a novel target for stopping neurodegeneration before it fully begins. In this study, we highlight what is known about tau acetylation and neurodegeneration.
Online reading behavior can be regarded as a "new" form of cultural capital in today’s digital world. However, it is unclear whether "traditional" mechanisms of cultural and social reproduction are also found in this domain, and whether they manifest uniformly across countries at different stages of development. This article analyzes whether the early home literacy environment has an impact on informational online reading behavior among adolescents and whether this association varies between countries with different levels of digitalization and educational expansion. Data from the 2009 Programme for International Student Assessment (PISA) were used for the empirical analyses. The results of regression models with country-fixed effects indicate a positive association between literacy activities in early childhood and informational online reading at age 15. This association was quite stable across countries. These findings are discussed in light of cultural and social reproduction theory and digital divide research.
The toolbox for imaging molecules is well-equipped today. Some techniques visualize the geometrical structure, others the electron density or electron orbitals. Molecules are many-body systems for which the correlation between the constituents is decisive and the spatial and the momentum distribution of one electron depends on those of the other electrons and the nuclei. Such correlations have escaped direct observation by imaging techniques so far. Here, we implement an imaging scheme which visualizes correlations between electrons by coincident detection of the reaction fragments after high energy photofragmentation. With this technique, we examine the H2 two-electron wave function in which electron–electron correlation beyond the mean-field level is prominent. We visualize the dependence of the wave function on the internuclear distance. High energy photoelectrons are shown to be a powerful tool for molecular imaging. Our study paves the way for future time resolved correlation imaging at FELs and laser based X-ray sources.
The cardiovascular system (CVS) consists of heart and blood vessels, forming a close circulatory loop. All tissues depend on the nutrients and molecular oxygen (O2) delivered by the blood. Therefore, it is not surprising that the CVS is one of the first working systems and the heart is the first functional organ in the forming embryo (Baldwin 1996). The building blocks of blood vessels are endothelial cells (ECs), which form the endothelium, a specialized epithelium that defines the luminal surface of the vessels (Pugsley and Tabrizchi 2000). The process of blood vessel development comprises several steps. The first events occurring are the formation of new vessels de novo to constitute the primary vascular loop known as vasculogenesis. During vasculogenesis the vascular precursors, known as angioblasts, migrate and coalesce to form the axial vessels. Subsequently, the main vessels undergo a specification step where they acquire either arterial or venous identity. As the embryo increases in size, the main vascular loop needs to increase in complexity. In order to reach all the different parts of the developing organs, new blood vessels are formed from pre-existing ones, a phenomenon known as angiogenesis (Gore et al. 2012).
Mature blood cells have a short lifespan. Therefore, hematopoietic stem cells (HSCs) are required throughout lifetime to constantly form new blood cells in a process called hematopoiesis. Interestingly, endothelial and immune cells development have been shown to converge at different points during their development, one of which is developmental hematopoiesis. During embryogenesis, definitive hematopoiesis occurs in a tissue called hemogenic endothelium (HE), a specialized subset of ECs at the ventral wall of the dorsal aorta (DA). HE acquires hematopoietic potentials and gives rise to HSCs, through a process known as endothelial-to-hematopoietic transition (EHT). During EHT, these specialized ECs extrude from DA and colonize the so-called aorta-gonadmesonephros (AGM) region, forming the native HSCs (Paik and Zon 2010).
As vascular development requires different steps, the molecular pathways involved are many. The Notch signaling pathway has been demonstrated to be one of the main players in vascular development. Among other functions, Notch signaling has been shown to be important during EHT. In the murine model, Runx1, a master regulator of HSC formation, has been shown to be transcriptionally regulated by NOTCH1 through GATA2 activation. This observation was later corroborated by knockdown studies for notch1a and notch1b in zebrafish (Butko, Pouget, and Traver 2016). Another essential pathway for vascular development is the HIF pathway. Hif-1α, Hif-1β and Hif-2α mouse mutants show severe vascular defects that result in early embryonic lethality (Simon and Keith 2008), which hinders a deep analysis of the phenotypes incurring in the mutant embryos. In addition, deletion of Hif-1α specifically in myeloid cells showed abnormalities in the motility, invasiveness, and adhesion of macrophages (Cramer et al. 2003). Intriguingly, Hif-1α deletion in vascular endothelial cadherin-expressing cells led to a significant but partial reduction of HSC number, suggesting that other players may be involved in this pathway (Imanirad et al. 2014).
Zebrafish embryos have been shown to be tolerant to hypoxia at very early stages of development (Padilla and Roth 2001). Also, zebrafish embryos develop externally and this allows to finely manipulate the environment where they grow (Lieschke and Currie 2007). These features make zebrafish an ideal model to investigate how hypoxia and Hif transcription factors affect vertebrate vascular development. In this study, I will examine the impact of hypoxia on zebrafish vascular development. Specifically, I will dissect the role of hif-1α in macrophage-EC interactions during vascular development and repair. Moreover, I show redundant functions for hif-1α and hif-2α in HSC development upstream of Notch signaling.
The ALICE High-Level-Trigger (HLT) is a large scale computing farm designed and constructed for the purpose of the realtime reconstruction of particle interactions (events) inside the ALICE detector. The reconstruction of such events is based on the raw data produced in collisions inside the ALICE at the Large Hadron Collider. The online reconstruction in the HLT allows the triggering on certain event topologies and a significant data reduction by applying compression algorithms. Moreover, it enables a real-time verification of the quality of the data.
To receive the raw data from the various sub-detectors of ALICE, the HLT is equipped with 226 custom built FPGA-based PCI-X cards, the H-RORCs. The H-RORC interfaces the detector readout electronics to the nodes of the HLT farm. In addition to the transfer of raw data, 108 H-RORCs host 216 Fast-Cluster-Finder (FCF) processors for the Time-Projection-Chamber (TPC). The TPC is the main tracking detector of ALICE and contributes with up to 16 GB/s to over 90% of the overall data volume. The FCF processor implements the first of two steps in the data reconstruction of the TPC. It calculates the space points and their properties from charge clouds (clusters) created by charged particles traversing the TPCs gas volume. Those space points are not only the base for the tracking algorithm, but also allow for a Huffman-based data compression, which reduces the data volume by a factor of 4 to 6.
The FCF processor is designed to cope with any incoming data rate up to the maximum bandwidth of the incoming optical link (160 MB/s) without creating back-pressure to the detectors readout electronics. A performance comparison with the software implementation of the algorithm shows a speedup factor of about 20 compared with one AMD Opteron 6172 Core @ 2.1 GHz, the CPU type used in the HLT during the LHC Run1 campaign. Comparison with an Intel E5-2690 Core @ 3.0 GHz, the CPU type used by the HLT for the LHC Run2 campaign, results in a speedup factor of 8.5. In total numbers, the 216 FCF processors provide the computing performance of 4255 AMD Opteron cores or 2203 Intel cores of the previously mentioned type. The performance of the reconstruction with respect to the physics analysis is equivalent or better than the official ALICE Offline clusterizer. Therefore, ALICE data taking was switched in 2011 to FCF cluster recording and compression only, discarding the raw data from the TPC. Due to the capability to compress the clusters, the recorded data volume could be increased by a factor of 4 to 6.
For the LHC Run3 campaign, starting in 2020, the FCF builds the foundation of the ALICE data taking and processing strategy. The raw data volume (before processing) of the upgraded TPC will exceed 3 TB/s. As a consequence, online processing of the raw data and compression of the results before it enters the online computing farms is an essential and crucial part of the computing model.
Within the scope of this thesis, the H-RORC card and the FCF processor were developed and built from scratch. It covers the conceptual design, the optimisation and implementation, as well as the verification. It is completed by performance benchmarks and experiences from real data taking.
Secretins form multimeric channels across the outer membrane of Gram-negative bacteria that mediate the import or export of substrates and/or extrusion of type IV pili. The secretin complex of Thermus thermophilus is an oligomer of the 757-residue PilQ protein, essential for DNA uptake and pilus extrusion. Here, we present the cryo-EM structure of this bifunctional complex at a resolution of ~7 Å using a new reconstruction protocol. Thirteen protomers form a large periplasmic domain of six stacked rings and a secretin domain in the outer membrane. A homology model of the PilQ protein was fitted into the cryo-EM map. A crown-like structure outside the outer membrane capping the secretin was found not to be part of PilQ. Mutations in the secretin domain disrupted the crown and abolished DNA uptake, suggesting a central role of the crown in natural transformation.
Studentische Lehrevaluationsergebnisse sind ein weit verbreitetes Maß, um die Qualität universitärer Lehre zu erfassen. Diese Ergebnisse werden unter anderem dafür genutzt, Entscheidungen für die Modifikation des Lehrangebots zu treffen oder die Vergabe der Leistungsorientieren Mittelvergabe mitzubestimmen. Aufgrund dieser relevanten Folgen wird in dieser Arbeit der Frage nachgegangen, wie ein angemessener Validierungsprozess bezüglich studentischer Lehrevaluationsergebnisse gestaltet werden könnte.
Bisherige Validierungsstudien zu studentischen Lehrevaluationsinventaren fokussierten sich meist auf die Überprüfung verschiedener Validitätsarten (inhaltsbezogene, kriteriumsbezogene oder faktorielle) und die Erfassung der Messfehlerfreiheit.
Allerdings ist zum einen zu hinterfragen, ob diese Ansätze grundsätzlich für alle Inventare geeignet sind. Weiterhin hat sich das Verständnis von dem verändert, was unter Validität verstanden wird: Von der Annahme von Validität als Testeigenschaft, verschiedener Validitätsarten und binärer Aussagen auf Basis von Einzelbefunden hin zu dem Verständnis von Validität bezogen auf die Testwert-Interpretation und Verwendung, zu einem einheitlichen Validitätskonzept und zu einer Validitäts-Argumentation. Diese Veränderungen werden in den neueren argumentationsbasierten Validitätsansätzen berücksichtigt und bieten einen Rahmen, der auf die jeweilige Intention ausgerichtet ist, einen Test oder Fragebogen einzusetzen.
Auf Grundlage dieser argumentationsbasierten Ansätze wird in dieser Arbeit die Interpretation studentischer Lehrevaluationsergebnisse überprüft, die als das Ausmaß an qualitätsbezogener Zufriedenheit der Teilnehmer mit der Durchführung einer Lehrveranstaltung und der Vermittlung von Lehrinhalten angesehen werden. Der Validierungsprozess wird anhand der Lehrevaluationsdaten des Frankfurter Promotionskollegs am Fachbereich Medizin dargestellt. Dieser Prozess bestätigte weitgehend die beabsichtigte Interpretation, zeigte aber auch eine zumindest teilweise Revision des Inventars und eine weitere Überprüfung an. Eine Validierung bezüglich der Verwendung der Lehrevaluationsergebnisse sowie der auf diesen basierenden beabsichtigten Konsequenzen wird in einer Folgestudie überprüft.
Anhand dieser Arbeit wird Anwendern und Entwicklern von Lehrevaluationsinventaren eine Her- und Anleitung für den Validierungsprozess gegeben und die Vorteile argumentationsbasierter Ansätze aufgezeigt.
Einleitung: Die Intention dieser Arbeit war es zu evaluieren, ob das Prüfungsformat eines OSPE (Objective Structured Practical Examination), durchgeführt im Fach Zahnerhaltungskunde (6. Fachsemester), Aussagen über den Studienerfolg im praktischen Teil des Staatsexamens (11. Fachsemester) im selben Fach zu treffen erlaubt. Ferner sollte unter Berücksichtigung allgemeiner Angaben der StudienteilnehmerInnen (Abitursnote, Physikumsnote, Studiendauer, Kohorte und Geschlecht) analysiert werden, ob bezüglich der Gesamt- sowie Teilnoten des OSPE und der Staatsexamensprüfung im Fach Zahnerhaltungskunde Zusammenhänge oder Unterschiede bestehen.
Methoden: Im Rahmen dieser longitudinalen, retrospektiven Studie wurden über einen Zeitraum von 11 Semestern prüfungsbezogene Daten von Studierenden (N = 223) des Fachbereichs Zahnmedizin in Frankfurt am Main erhoben und untersucht. Ferner wurden persönliche Angaben der Studienteilnehmer zu Alter, Geschlecht, Abitursnote, Physikumsnote und Studiendauer evaluiert sowie eine Zuordnung zu Kohorten vorgenommen. Für die statistische Auswertung der Daten wurden Spearman Rangkorrelationen, Partialkorrelationen, Korrelationskoeffizienten nach Pearson, und Multiple Regressionen (SPSS Statistics 21, IBM Corporation, New York) berechnet.
Ergebnisse: Die Ergebnisse zeigen, dass die Durchführung einer OSPE (Cronbachs α = .87) mit dem Erfolg im praktischen Teil des Staatsexamens im Fach Zahnerhaltungskunde korreliert (p = .01, r = .17). Als eine weitere signifikante Korrelation mit der Examensleistung erwies sich die Dauer des Studiums (p = .001, r = .23). Gemeinsam vermögen diese beiden Variablen einen signifikanten Beitrag zur Vorhersage der Examensnote (p = .001, R2 = .076) zu leisten. Das zeigte sich im größeren Umfang bei weiblichen Studierenden. Zudem wurde festgestellt, dass diese bessere Abitursnoten als männliche Studierende aufweisen (F = 6.09, p = .01, η² = .027) und dass es nur bei männlichen Studierenden eine signifikante Korrelation zwischen der Physikumsnote (Zahnärztliche Vorprüfung) und der OSPE-Benotung gab (r = .17, p = .01).
Schlussfolgerung: In der vorliegenden Untersuchung konnte der prädiktive Effekt eines durchgeführten klinischen OSPE auf die Prüfungsleistung im Staatsexamen nachgewiesen werden. Unter Berücksichtigung der Limitation der Studie empfiehlt sich aus unserer Sicht die Durchführung eines solchen Prüfungsformats im Rahmen des klinischen Studienabschnitts im 6. Semester im Fach Zahnmedizin.
Deciphering the ecological functions of fungal root endophytes based on their natural occurrence
(2017)
Plants are colonized by a large diversity of fungi, some residing on the surface and others penetrating the plant tissues, the latter referred to as fungal endophytes (endon Gr., within; phyton, plant; de Bary 1879). Despite the saprotrophic potential of fungal endophytes, they are not found to cause visible disease symptoms to the host. Plants are colonized simultaneously by various fungal species, which form rich and diverse endophytic assemblages. Although it is hypothesized that fungal endophytes contribute to the fitness of their hosts and to the functioning of ecosystems, the ecological function of fungal endophytic assemblages remains cryptic. The aims of this doctoral thesis are to gain insight to the ecological functions of root fungal endophytes, by deciphering their roles in ecosystems based on their natural occurrence and the structure of their assemblages. The thesis focuses on studying the diversity and structure of the endophytic mycobiome within roots of two annual and widespread plant hosts Microthlapsi perfoliatum and M. erraticum (Brassicaceae) in several locations across northern Mediterranean and central Europe. The thesis is composed by six Chapters, with a primary focus on Chapter 1, 2 and 3.
Chapter 1 (Glynou et al., 2016) aimed at characterizing the diversity of fungal endophytes in roots at a continental scale and at assessing the factors affecting the structure of endophytic assemblages with the use of cultivation-based methods. For that, root samples were collected from 52 plant populations, along with a collection of soil, bioclimatic, geographic and host data. Cultivation of surface-sterilized root samples on culture media and isolation of fungal colonies in pure culture generated 1,998 fungal colonies. Grouping of sequences into Operational Taxonomic Units (OTUs), based on the 97% similarity of the isolates’ rDNA Internal Transcribed Spacer (ITS) sequence, generated in total 296 OTUs, representing taxa mostly within the phylum Ascomycota with a minor representation of Basidiomycota. Endophytic assemblages were mostly correlated with variation in bioclimatic conditions. Interestingly, despite the large diversity revealed, the assemblages were dominated by only six OTUs related to the orders Hypocreales, Pleosporales and Helotiales, which had a widespread distribution across populations but with some following patterns of ecological preferences.
Chapter 2 aimed at characterizing the uncultivable fraction of the root fungal endophytic diversity, which was not possible to capture in Chapter 1. High-throughput sequencing via the
Illumina Miseq platform was implemented in 43 of the 52 original populations and mostly in the same root samples. In comparison with the cultivation-based approach, the HTS managed to cover the overall diversity within samples. It revealed a large non-cultivated endophytic diversity but the same cultivable fungi dominated assemblages. Moreover, the endophytic diversity was grouped mostly within fungal orders with demonstrated ability to grow in culture and taxonomically related groups were found to have divergent ecological preferences.
The genetic identity of the most abundant OTUs was further investigated in Chapter 3 (Glynou et al., 2017), aiming to unravel genotypic variability, which was possibly overlooked due to the use of lTS, as a universal genetic marker, and could explain their high abundance and widespread distribution. Multi-locus gene sequencing and AFLP profiling for the five most abundant OTUs suggested a low within-OTU genetic variability and show that these fungi have ubiquitous distribution and are not limited by environmental conditions within the ecological ranges of the study. A selection of endophytes frequently isolated in Chapter 1 was functionally characterized in Chapter 4 (Kia et al., 2017) based on the isolates’ traits and interactions with plants. In Chapter 5 (Cheikh-Ali et al., 2015) fungal cultures of Exophiala sp. with differential colony structure where investigated for their production of secondary metabolites. Moreover, Chapter 6 (Maciá-Vicente et al., 2016) comprises the description of the new species Exophiala radicis based on morphological and molecular characteristics.
Compilation of all results shows that the fungal endophytic diversity in roots of Microthlaspi spp. is high but few widespread OTUs dominate the assemblages, and have unlimited dispersal ability. These fungi seem also to have a wide niche breadth and are not affected by environmental filtering. The findings indicate that the local environment but also processes of competitive exclusion determine the structure of endophytic assemblages. In addition, the fungal endophytes associated with Microthlapsi spp. likely have saprotrophic activity however the interactions with plants are likely context-dependent. Further research is needed to assess the biotic interactions among endophytes and their effect on the structure of fungal endophytic assemblages. Ultimately, the findings of this thesis are useful to shed light on the processes underlying the structure of endophytic assemblages. They also upraise the need to describe diversity by combining genetic, metabolic and physiological data, in order to disentangle the elusive ecological roles of the endophytic mycobiome.
Patients who undergo endovascular repair of aortic aneurysms (EVAR) require life-long surveillance because complications including, in particular, endoleaks, aneurysm rupture, and graft dislocation are diagnosed in a certain share of the patient population and may occur at any time after the original procedure. Radiation exposure in patients undergoing EVAR and post-EVAR surveillance has been investigated by previous authors. Arriving at realistic exposure data is essential because radiation doses resulting from CT were shown to be not irrelevant. Efforts directed at identification of factors impacting the level of radiation exposure in both the course of the EVAR procedure and post-EVAR endovascular interventions and CTAs are warranted as potentially modifiable factors may offer opportunities to reduce the radiation. In the light of the risks found to be associated with radiation exposure and considering the findings above, those involved in EVAR and post-EVAR surveillance should aim at optimal dose management.
We have determined the crystal structures of two decachlorocyclopentasilanes, namely bis(tetra-n-butylammonium) dichloride decachlorocyclopentasilane dichloromethane disolvate, 2C16H36N+·2Cl−·Si5Cl10·2CH2Cl2, (I), and bis(tetraethylammonium) dichloride decachlorocyclopentasilane dichloromethane disolvate, 2C8H20N+·2Cl−·Si5Cl10·2CH2Cl2, (II), both of which crystallize with discrete cations, anions, and solvent molecules. In (I), the complete decachlorocyclopentasilane ring is generated by a crystallographic twofold rotation axis. In (II), one cation is located on a general position and the other two are disordered about centres of inversion. These are the first structures featuring the structural motif of a five-membered cyclopentasilane ring coordinated from both sides by a chloride ion. The extended structures of (I) and (II) feature numerous C—H⋯Cl interactions. In (II), the N atoms are located on centres of inversion and as a result, the ethylene chains are disordered over equally occupied orientations.
Status and restoration potential of heathlands and sand grasslands in the southwest of Luxembourg
(2017)
In Europe, semi-natural nutrient-poor ecosystems such as sand grasslands and heathlands have shown extreme declines in surface area and species richness within the last century. The remaining sites are hence of high conservation value. This study analysed the vascular plant species inventory of established and recently restored heathlands and sand grasslands in the southwest of Luxembourg. Analyses to explain differences in vegetation composition between “old” (remnant sites or sites restored a long time ago) and “new” (recently restored) sites in relation to environmental variables were carried out with DCAs and ANOVA/Mann-Whitney-U tests, respectively. The vegetation of old heathlands had few character species of typical heathland communities (Calluno-Ulicetea, Nardetalia), whereas new heathland sites were preponderantly marked by taxa of meso- or eutrophic grasslands and ruderal communities. New heathland sites mainly differed from old sites by higher soil phosphorus contents. Sand grassland vegetation was species-rich and composed by species of the Sedo-Scleranthetea and Festuco-Brometea. With increasing age of the sites, vegetation composition shifted to grass dominance with species of the Molinio-Arrhenateretea. New sand grasslands differed from old sand grasslands by higher soil pH, higher soil potassium content and lower graminoid cover. The differences between new and old sites of both habitat types could mainly be explained by successional processes or were a result of topsoil removal. In some cases, former anthropogenic impact at or in close proximity of restored sites resulted in unsuitable conditions, such as alkaline soil on former landfill sites or highly eutrophic soil due to intensive agriculture. Future management options for the study sites are discussed.
This study describes the vascular flora and community structure of grasslands occurring on heaps of waste rock left by former Zn-Pb mining in relation to the metal content in the soil and other environmental factors. The study was performed on 65 heaps scattered in agricultural land in southern Poland. The sites were described in terms of plant community characteristics, soil physicochemical properties, distance from woodland, altitude and local climate. The number of plant species and proportion of species of the Festuco-Brometea class decreased with increasing heavy metal (Cd, Pb, Zn) content in the soil, and increased with Ca content and pH of the soil. There was a negative relationship between the proportion of the later successional species and heavy metal content in the soil and a positive relationship between plants connected with the earlier stages of succession and metals. Floristic composition was also affected by distance from woodland and height above sea level. The investigated heaps were primarily colonised by native species dispersed by wind, characterised as competitive stresstolerant, ruderal and competitive strategy species. Three types of Carlino acaulis-Brometum erecti (CB) communities were distinguished: CB typicum – dominated by Brachypodium pinnatum, with the highest proportion of calcareous grassland species, CB festucetosum ovinae subass. nova – loose grassland with abundant facultative metallophytes, and the CB rubietosum caesi subass. nova with nutrientdemanding ruderal and woody plants invading from the nearby forest communities. The three subassociations represent different successional stages of Carlino acaulis-Brometum erecti, strongly dependent on both the substrate and spatial relations. The proportions of species traits, especially a high occurrence of endangered species and a very low proportion of alien species show that the post-mining habitats studied have a similar degree of ‘naturalness’ as valuable xerothermic grasslands on nonmetalliferous habitats. They thus may be considered as valuable objects for the protection of plant diversity.
This paper provides a comprehensive survey of the results of phytocoenological research into Alnus incana forests from the alliance Alnion incanae in the Dinarides. Stands from the south-eastern Dinarides (Alnetum incanae = Oxali-Alnetum incanae) were analyzed and compared with those from the north-western Dinarides (Lamio orvalae-Alnetum incanae). The comparison reveals significant differences in the floristic composition and in the degree of differentiation – and particularly in the presence of the species of the Illyrian floristic geoelement. Focus was placed on the area of western Croatia where a geographic variant of Helleborus dumetorum had previously been defined within the association Lamio orvalae-Alnetum incanae. Two of its subtypes, Salix alba and Alnus glutinosa, were determined in our research. The former subtype thrives on occasionally flooded, moist sites, where the floristic composition is dominated by hygrophytes. The latter subtype grows on elevated and drier terraces and is richer in mesophilous species from the surrounding zonal forests. A floristic-sociological comparison of the Lamio orvalae-Alnetum incanae with the related syntaxa indicates the presence of about fourty diagnostic species which accentuate its independence and the need to assess it at the level of an independent, regional association within the alliance Alnion incanae.
The aim of our study was to reveal the differences in the species composition and soil properties of open sandy grasslands dominated by different Festuca species, Festuca vaginata and F. pseudovaginata. Due to the arid conditions, sandy grasslands are generally covered by xerothermic vegetation in which F. vaginata is a typical dominant species. Festuca pseudovaginata, a species newly described by the authors, can also gain dominance in sandy grasslands. However, species composition and soil properties of grasslands dominated by this recently discovered species are still undiscovered. Based on previous coenological studies, we hypothesised that the grasslands characterised by the endemic F. vaginata are more species-rich than those with F.pseudovaginata.
Coenological sampling was carried out in May 2009 at two study sites using the Braun-Blanquet method in quadrats of 2 m × 2 m. Five relevés were sampled in stands dominated by F. vaginata and F. pseudovaginata respectively at two study sites in Central Hungary, resulting in a total of twenty relevés. Analyses were based on the cover scores of vascular plant species and cryptogam crust and values of seven soil properties (pH [KCl], pH [H2O], humus, total N, Ca, P2O5 and K2O) measured in the 0–15 and 15–30 cm soil layers. Soil properties of the grasslands dominated by F. pseudovaginata and F. vaginata (dependent variables) were compared by linear mixed models, where ‘grassland type’ was the fixed factor and ‘site nested in grassland type’ was considered as random factor. Data were analysed by cluster analysis, fusion algorithm was a combinatorial method (minimising increase of variance), and the correlation was used as comparative function. We compared the cover of subordinate species by Mann-Whitney U test. We found that F. pseudovaginata and F. vaginata samples were well separated, and grasslands dominated by F. pseudovaginata had nearly two times more species than those dominated by F. vaginata. Based on the cluster analyses using plant cover and upper 0–15 cm soil layer data, F. pseudovaginata and F. vaginata groups could be well separated. Linear mixed models revealed that F. vaginata grasslands were typical on soils with higher pH, nitrogen, phosphorous and potassium contents compared to F. pseudovaginata grasslands, which indicates a tight connection between the properties of the upper soil layer and the vegetation in sandy grasslands.
Bromus racemosus L. is a rather rare grass species of moist meadows. It has strongly decreased in the course of the 20th century due to intensification of agricultural grassland management, and is therefore included in Red Lists of several European countries. Its winter annual life-cycle is remarkable for a species of permanent grasslands.
The aim of this study is to determine the habitat preference and optimal management of B. racemosus in the Netherlands and surrounding countries. Vegetation, soil and hydrological data from 28 sites in the Netherlands have been compared with B. racemosus cover, and with vegetation data from surrounding countries. The results indicate that B. racemosus is characteristic of Molinio-Arrhenatheretea meadows with good mineralisation and aftermath grazing. The optimum lies in grasslands of the alliance Alopecurion pratensis (Deschampsion cespitosae), but the species ranges from wetter Calthion palustris meadows to drier Arrhenatherion elatioris and Cynosurion cristati grasslands. It prefers intermediate nutrient levels and hydrological conditions (mesic sites), but within this range the highest cover is found in relatively nutrient rich and dry sites. Because of the absence of a seedbank and a low dispersal capability, B. racemosus is vulnerable to changes in grassland management. A management of mowing after 15 June and aftermath grazing is most suitable, since it enables fruit ripening and the maintenance of an open sward, needed for germination and development. The risk of extinction is likely to be higher in flat polders than in floodplain sites with natural relief, where the species may shift between belts in different years.
Vegetation patterns of floodplain forests are highly variable across different habitats in European regions. Their plant communities have been well described from the phytosociological point of view, but plant species richness and composition patterns and their underlying environmental factors are still insufficiently known. Sixty-one vegetation plots of black alder-dominated floodplain forests were sampled in central Slovakia in order to find main environmental predictors affecting floristic diversity of their vegetation. For each vegetation plot with a constant size (400m2), vascular plant species and a set of topographic, climatic, soil physical and chemical characteristics were recorded. A generalized linear model was applied to explain relevance of environmental factors on changes of species richness, whereas the relationship between species composition and explanatory variables was tested using ordination methods. Main gradients of species compositional variation were soil moisture, light, elevation and soil chemistry-related variables. Vascular species richness of plots varied between 19 and 59 (mean 38). Herb-layer species richness was positively related to the soil pH, stream power index and negatively to the concentration of soil iron. These linear trends were accompanied by a hump-shaped response to sand content and a U-shaped response to elevation.
Bacteria are highly organized organisms which are able to adapt to and propagate under a multitude of environmental conditions. Propagation hereby requires reliable chromosome replication and segregation which has to occur cooperatively with other cellular processes such as transcription, translation or signaling. Several mechanisms were proposed for segregation of the Escherichia coli (E. coli) chromosome, for example a mitotic-like active segregation model or entropy-based passive chromosome segregation. Another segregation model suggests coupled transcription, translation and insertion of membrane proteins (termed "transertion"), which links the replicating chromosome (nucleoid) to the growing cell cylinder.
Fluorescence microscopy was widely used to provide evidence for a distinct segregation model. However, the dynamic nature of bacterial chromosomes, the small bacterial size and the optical resolution limit of ~ 200-300 nm impair unveiling the underlying mechanisms. With the emergence of super-resolution fluorescence microscopy techniques and advanced labeling methods, a new toolbox became available enabling scientists to visualize biomolecules and cellular processes in unprecedented detail. Single-molecule localization microscopy (SMLM) represents a set of super-resolution microscopy techniques which relies on the temporal separation of the fluorescence signal and detection of single fluorophores. Separation can be achieved using photoactivatable or -convertible fluorescent proteins (FPs) in photoactivated localization microscopy (PALM), photoswitchable organic dyes in direct stochastic optical reconstruction microscopy (dSTORM) or dynamically binding fluorescent probes in point accumulation for imaging in nanoscale topography (PAINT). In all these techniques, the fluorescence emission pattern of single fluorophores is spatially localized with nanometer-precision. An artificial image is finally reconstructed from the coordinates of all single fluorophores detected. This provides a spatial resolution of ~ 20 nm, which is perfectly suited to investigate cellular processes in bacteria. In this thesis, different SMLM techniques were applied to study fundamental processes in E. coli. This includes determination of protein copy numbers and distributions as well as the nanoscale organization of nucleic acids and lipids.
A novel labeling approach was applied and used for super-resolution imaging of the E. coli nucleoid. It is based on the incorporation of the modified thymidine analogue 5-ethynyl-2’- deoxyuridine (EdU) into the replicating chromosome. Azide-functionalized organic fluorophores can be covalently attached to the ethynyl group of incorporated EdU bases using a copper-catalyzed "click chemistry" reaction. Under the investigated growth condition, E. coli cells exhibited overlapping replication cycles, which is commonly referred to as multi-fork replication and enables cells to divide faster than they can replicate the entire chromosome. dSTORM imaging of such labeled nucleoids revealed chromosome features with diameters of 50 - 200 nm, representing highly condensed DNA filaments. Sorting single E. coli cells by length allowed visualizing structural changes of the nucleoid throughout the cell cycle. Replicating nucleoids segregated and expanded along the bacterial long axis, while constantly covering the entire width of the cell. Measuring cell and nucleoid length revealed a relative nucleoid expansion rate of 78 ± 6 %. At the same time, nucleoids populated 63 ± 8 % of the cell length, almost exclusively being localized to the cylindrical part of the cell. This value was hence normalized to the cylindrical fraction of the cell, yielding a value of 79 ± 10 % (nucleoid-populated fraction of the cell cylinder), which is in good agreement with the observed relative nucleoid expansion rate. These results therefore support a growth-mediated segregation model, in which the chromosome is anchored to the inner membrane and passively segregated into the prospective daughter cells upon cell growth. 3-dimensional dSTORM imaging of labeled nucleoids confirmed that compacted nucleoids helically wrap along the inner membrane. Similar results were obtained by imaging orthogonally aligned E. coli cells using a holographic optical tweezer approach.
In order to visualize particular proteins together with the nucleoid, several correlative imaging workflows were established, facilitating multi-color SMLM imaging in single E. coli cells. These workflows bypass prior limitations of SMLM, including destruction of FPs by reactive oxygen species in copper-catalyzed click reactions or incompatibility of PALM imaging with dSTORM imaging buffers. A sequential SMLM imaging routine was developed which is based on postlabeling and retrieval of previously imaged cells. Optimal imaging conditions can be maintained for each fluorophore, enabling to extract quantitative information from PALM measurements while correlating the protein distribution to the nucleoid ultrastructure within the highly resolved cell envelope. Applying this workflow to an E. coli strain carrying a chromosomal rpoC - photoactivatable mCherry (PAmCh) fusion, transcribing RNA polymerase (RNAP) was found to be localized on the surface of nucleoids, where active genes are exposed towards the cytosol. During growth in nutrient-rich medium, the majority of RNAP molecules was bound to the chromosome, thus ensuring that the RNAP pool is equally distributed to the daughter cells upon cell division. This work represented the first triple-color SMLM study performed in E. coli cells. ...
The East African Rift System (EARS) was initiated in the Eocene epoch between 50 and 21 Ma probably due to the influence of mantle plumes that caused volcanism, flood basalts and rifting extensions in Ethiopa and the Afar region. As a result of magmatic intrusions and adiabatic decompression melting within the lithosphere caused by the impact of the Kenya plume, there was a southward propagation of the EARS of about 30 – 15 Ma from Ethiopia to Kenya, which coincide with the occurrence of volcanism. The EARS developed towards the south along the margins of the Tanzania Craton between 15 and 8 Ma. Previous findings of low-velocity anomalies within the upper mantle and the mantle transition zone indicate an upwelling of hot mantle material in the vicinity of the Afar region and the East African Rift. This study includes the analysis of P- and S-receiver functions in order to determine further impacts on the lithosphere from below. The aim was to determine the topographic undulations of further boundary layers and to identify their variability owing to the rifting processes and the formation of the EARS. The study area included the Tanzania Craton and the surrounding rift branches of the East African Rift System.
The region of the Rwenzori Mountains can be analysed in detail because of the large dataset of the RiftLink project. The use of the P-receiver function technique and the H-K stacking method enabled to determine different vP /vS ratios depending on the tectonic setting in the Rwenzori region: Rift shoulders (vP /vS =1.74), Albert Rift segment (vP /vS =1.80), Edward Rift segment (vP /vS =1.87) and Rwenzori Mountains (vP /vS =1.86). To determine the topography of the Moho, it is necessary to take into account the thickness of the sedimentary layer, the surface topography, the azimuthal variations in crustal thickness and the impact of local anomalies. After correcting these effects on the Moho depths, significant variations in Moho topography could be determined. The Moho depths range from 29 to 39 km beneath the rift shoulders of the Albertine Rift. Within the rift valley, the crustal thickness varies between 25 – 31 km in the Edward Rift segment and 22 – 30 km in the Albert Rift segment. An averaged crustal thickness of about 26 km within the rift valley indicates the lack of the crustal root beneath the Rwenzoris. Similar variations in crustal thickness were determined by using an automatic procedure for analysing S-receiver functions that was developed in this study.
The S-receiver functions are created by applying a rotation criterion in order to rotate the Z, N and E components into the L, Q and T components. It is necessary to perform trial rotations using different incident and azimuth angles to determine the correct rotation angles. The latter are identified by the use of the rotation criterion, including the amplitude ratio of the converted Moho signal to the direct S/SKS-wave signal. The L component is rotated correctly in the direction of the incident shear wave in the case of the maximum amplitude ratio. After analysing the frequency content of the receiver functions in order to sort out harmonic and long-periodic traces, the individual Moho signals are checked for consistency in order to remove atypic signals. To increase the signal-to-noise ratios on the traces, the S-receiver functions are stacked. For this purpose, the signals of the direct shear waves must originate from similar epicenters. On the basis of similar ray paths, the receiver functions show comparable waveforms and converted signals. To perform the stacking procedure, it is necessary to merge the datasets of the adjacent stations in order to obtain a sufficient number of receiver functions. This analysis is based on the assumption that the incident seismic waves arriving at the adjacent stations penetrate to some extent the same underground structures in the case of similar wave propagation paths. This approach accounts for the fact that the converted signals do not result exclusively from the piercing points at the boundary layers. Further signals originate from the conversions at the boundary layer within the Fresnel Zone. The piercing points are derived from the significant signals in the receiver functions. Depending on the order of arrival of the converted phases on the traces, the signals are attributed to the theoretical discontinuities DIS1, DIS2, DIS3 and DIS4. However, partly due to the low signal-to-noise ratios on the traces, it is difficult to identify the real conversions on the traces and to ensure that the converted signals are attributed to the correct boundary layers. For this reason, it is necessary to check the consistency of the conversion depths among each other. In the case of inconsistent conversion depths, the corresponding signals are either adjusted to another seismic boundary layer or removed from the dataset. To verify the functionality of the automatic procedure and to determine the resolvability with respect to two boundary layers, several models are tested including horizontal and dipping discontinuities. To resolve distinct discontinuities, their depths must differ by at least 60 km, otherwise, due to similar depth ranges of the different boundary layers, the converted signals cannot be separated from each other. As a consequence, the converted signals that originate from different discontinuities are attributed to a single one. Further tests including break-off edges of seismic discontinuities are performed to check the attributions of the converted signals to the discontinuities. Owing to the varying number of boundary layers, the converted signals cannot be attributed to the discontinuities according to the order of their arrivals on the traces. It is necessary to correct their attributions to the seismic discontinuities in order to resolve the boundary layers.
The crust-mantle boundary and further discontinuities within the lithospheric mantle are investigated by applying this automatic procedure. Depending on the tectonic setting, the conversion depths of the Moho range from about 30 – 45 km beneath the western rift shoulder to 20 – 35 km within the rift valley up to 30 – 40 km beneath the eastern rift shoulder. The long wavelengths of the shear waves hamper the correct identification of the converted phases in the S-receiver functions. With respect to the relative differences in conversion depth, the topographic undulations of the crust-mantle boundary are consistent with the Moho depths derived from P-receiver functions. In contrast to the Rwenzori region, it is difficult to resolve completely the trend of the Moho in the remaining area of the East African Rift due to the small dataset provided by IRIS. The results exibit an increase in crustal thickness to up to 45 km in the region of the Cenozoic volcanics such as Virunga, Kivu, Rungwe and Kenya. The greatest Moho depths of more than 50 km are located near Mount Kilimanjaro. In addition to the Moho, the analysis of the S-receiver functions revealed two further boundary layers at depths of 60 – 140 km and 110 – 260 km, which are associated with a mid-lithospheric discontinuity and the lithosphere-asthenosphere boundary, respectively. The shallowest conversion depths of the LAB are focussed to small-scale regions within the rift branches, namely the northern Albertine Rift, the Chyulu Hills and the Mozambique Belt, which are located around the Tanzania Craton. The larger thickness of the lithosphere beneath the cratonic terrain indicates that the Tanzania Craton is not significantly eroded. However, there are indications that the lithosphere beneath the craton and the rift branches is penetrated by ascending asthenospheric melts to depths of up to 140 and 60 km, respectively. The top of the ascending melts is associated with the occurrence of the mid-lithospheric discontinuity. The shallowest conversion depths of this boundary layer (60 – 90 km) are related to the rifted areas of the EARS and the Cenozoic volcanic provinces, which are located along the Albertine Rift, the Kenya Rift and the Rukwa-Malawi rift zones. The deepest conversion depths of up to 140 km are related to the Rwenzori Belt, the Ugandan Basement Complex and the interior of the Tanzania Craton.
Ziel dieser Dissertation war es, die biologische Rolle der Autophagie für die Entwicklung, Alterung und mitochondriale Qualitätskontrolle in dem Ascomyceten Podospora anserina zu untersuchen. Folgende Ergebnisse wurden dabei erzielt:
1. Der Verlust einer funktionalen Autophagie-Maschinerie ist in P. anserina mit einem Defekt der Sporen-Entwicklung bzw. -Keimung charakterisiert.
2. Es konnten drei Methoden zur Untersuchung der Autophagie in P. anserina etabliert werden: 1) Die Verwendung eines Gfp::PaAtg8-Stamms ermöglicht die Fluoreszenzmikroskopische Bestimmung der Autophagosomen-Anzahl; 2) Die phänotypische Charakterisierung des PaAtg1-Deletionsstamms unter verschiedenen Stressbedingungen (z. B. Stickstoffmangel, Rapamycin) liefert Hinweise auf eine mögliche Autophagie-abhängige Stressadaption; 3) Die Verwendung des „GFPcleavage assays“ ermöglicht einen quantitativen Nachweis genereller und selektiver Autophagie (hier: Mitophagie).
3. In zwei voneinander unabhängigen Experimenten wurde ein altersabhängiger Anstieg der Autophagie für P. anserina demonstriert: Das Autophagie-Niveau nimmt in gealterten P. anserina-Kulturen zu. Gleichzeitig resultiert der Verlust der Autophagie in ∆PaAtg1 in eine reduzierte Lebensspanne. Unter Stressbedingungen (hier: Stickstoffmangel) wird dieser positive Einfluss der Autophagie auf die Lebensspanne im Wildtyp sogar noch verstärkt.
4. Der unerwartet „gesunde“ Phänotyp der PaSod3-Deletionsmutante ist abhängig von einer funktionalen Autophagie-Maschinerie. Der Mitophagie wurde eine besondere Rolle als Kompensationsmechanismus für den Verlust von PaSOD3 zugeteilt, da das Mitophagie-Niveau in dieser Mutante erhöht ist. Am Beispiel dieser Mutante, für die ein erhöhter Superoxid-Ausstoß nachgewiesen wurde, konnte eine Dosis-abhängige Wirkung von ROS in P. anserina identifiziert werden. Eine geringe zelluläre ROSMenge verursacht eine mitohormetische Reaktion, die eine Induktion der Mitophagie zur Folge hat und sich positiv auf den Organismus auswirkt. Übersteigt die zelluläre ROS-Dosis einen kritischen Punkt, kommt es zur Induktion des autophagischen Zelltods und damit zum vorzeitigen Tod des Individuums.
5. Der Verlust der PaCLPXP-Protease führt zu Beeinträchtigungen in der Funktion und Zusammensetzung der mitochondrialen Atmungskette. Dieses Defizit im Energiemetabolismus wird über eine Induktion der AOX, vor allem aber über eine ZUSAMMENFASSUNG 127 gesteigerte Autophagie kompensiert. Die deutlich verlängerte Lebensspanne der verschiedenen PaClpXP-Deletionsmutanten (∆PaClpX, ∆PaClpP und ∆PaClpXP) ist abhängig von einer funktionalen Autophagie-Maschinerie. Interessanterweise konnte keine kompensatorische Funktion der Autophagie oder Mitophagie für den Verlust der mitochondrialen i-AAA-Protease PaIAP in P. anserina nachgewiesen werden.
Autophagie/Mitophagie stellt einen übergeordneten Qualitätskontrollmechanismus in P. anserina dar, der den Organismus sehr effektiv vor zellulären Schäden und Dysfunktionen bewahrt und einen positiven Einfluss auf die Alterung, Entwicklung und Energieversorgung einnimmt.
Background: Isolated transient vertigo can be the only symptom of posterior circulation ischemia. Thus, it is important to differentiate isolated vertigo of a cerebrovascular origin from that of more benign origins, as patients with cerebral ischemia have a much higher risk for future stroke than do those with "peripheral" vertigo. The current study aims to identify risk factors for cerebrovascular origin of isolated transient vertigo, and for future cerebrovascular events.
Methods: From the files of 339 outpatients with isolated transient vertigo we extracted history, clinical and technical findings, diagnosis, and follow-up information on subsequent stroke or transient ischemic attack (TIA). Risk factors were analyzed using multivariate regression models (logistic or Cox) and reconfirmed in univariate analyses.
Results: On first presentation, 48 (14.2%) patients received the diagnosis "probable or definite cerebrovascular vertigo". During follow-up, 41 patients suffered stroke or TIA (event rate 7.9 per 100 person years, 95% confidence interval (CI) 5.5–10.4), 26 in the posterior circulation (event rate 4.8 per 100 person years, 95% CI 3.0–6.7). The diagnosis was not associated with follow-up cerebrovascular events. In multivariate models testing multiple potential determinants, only the presentation mode was consistently associated with the diagnosis and stroke risk: patients who presented because of vertigo (rather than reporting vertigo when they presented for other reasons) had a significantly higher risk for future stroke or TIA (p = 0.028, event rate 13.4 vs. 5.4 per 100 person years) and for future posterior circulation stroke or TIA (p = 0.044, event rate 7.8 vs. 3.5 per 100 person years).
Conclusions: We here report for the first time follow-up stroke rates in patients with transient isolated vertigo. In such patients, the identification of those with cerebrovascular origin remains difficult, and presentation mode was found to be the only consistent risk factor. Confirmation in an independent prospective sample is needed.
Functional imaging studies using BOLD contrasts have consistently reported activation of the supplementary motor area (SMA) both during motor and internal timing tasks. Opposing findings, however, have been shown for the modulation of beta oscillations in the SMA. While movement suppresses beta oscillations in the SMA, motor and non-motor tasks that rely on internal timing increase the amplitude of beta oscillations in the SMA. These independent observations suggest that the relationship between beta oscillations and BOLD activation is more complex than previously thought. Here we set out to investigate this rapport by examining beta oscillations in the SMA during movement with varying degrees of internal timing demands. In a simultaneous EEG-fMRI experiment, 20 healthy right-handed subjects performed an auditory-paced finger-tapping task. Internal timing was operationalized by including conditions with taps on every fourth auditory beat, which necessitates generation of a slow internal rhythm, while tapping to every auditory beat reflected simple auditory-motor synchronization. In the SMA, BOLD activity increased and power in both the low and the high beta band decreased expectedly during each condition compared to baseline. Internal timing was associated with a reduced desynchronization of low beta oscillations compared to conditions without internal timing demands. In parallel with this relative beta power increase, internal timing activated the SMA more strongly in terms of BOLD. This documents a task-dependent non-linear relationship between BOLD and beta-oscillations in the SMA. We discuss different roles of beta synchronization and desynchronization in active processing within the same cortical region.
Over the last several decades, spinel-structured minerals with the chemical formula AB2O4 (where A and B stand for divalent and trivalent cations, respectively) have attracted more and more attention, particularly with regards to their breakdown at high pressures and temperatures and the nature of the so-called "post-spinel" phases. Spinel-structured phases with different endmember compositions, like magnetite (Fe3O4), hercynite (FeAl2O4) or spinel (MgAl2O4), are known to breakdown differently at high pressure-temperature conditions (e.g., Akaogi et al. 1999; Schollenbruch et al. 2010; Woodland et al. 2012). Such phases are of particular interest when they incorporate ferric (Fe3+) and ferrous (Fe2+) cations as this makes their stability sensitive to redox conditions. Since magnetite and magnesioferrite (MgFe3+ 2O4) have been found as inclusions in diamond (e.g., Stachel et al. 1998; Harte et al. 1999; Wirth et al. 2014; Palot et al. 2016; Jacob et al. 2016), understanding their phase relations is important for setting constraints on the conditions of their formation.
This study aimed to experimentally investigate the phase relations of Fe-Mg spinel-structured phases at conditions of the deep upper mantle and transition zone. Exploring the stability of new post-spinel phases and their characterization were also major goals of this study. Approaching a pyrolitic mantle composition by adding amounts of SiO2 in the system allowed constraints on the relevance of Fe-Mg post-spinel phases coexisting with mantle silicates to be made. ...
Reactive oxygen species are produced transiently in response to cell stimuli, and function as second messengers that oxidize target proteins. Protein-tyrosine phosphatases are important reactive oxygen species targets, whose oxidation results in rapid, reversible, catalytic inactivation. Despite increasing evidence for the importance of protein-tyrosine phosphatase oxidation in signal transduction, the cell biological details of reactive oxygen species-catalyzed protein-tyrosine phosphatase inactivation have remained largely unclear, due to our inability to visualize protein-tyrosine phosphatase oxidation in cells. By combining proximity ligation assay with chemical labeling of cysteine residues in the sulfenic acid state, we visualize oxidized Src homology 2 domain-containing protein-tyrosine phosphatase 2 (SHP2). We find that platelet-derived growth factor evokes transient oxidation on or close to RAB5+/ early endosome antigen 1− endosomes. SHP2 oxidation requires NADPH oxidases (NOXs), and oxidized SHP2 co-localizes with platelet-derived growth factor receptor and NOX1/4. Our data demonstrate spatially and temporally limited protein oxidation within cells, and suggest that platelet-derived growth factor-dependent “redoxosomes,” contribute to proper signal transduction.
A great challenge in life sciences remains the site-specific modification of proteins with minimal perturbation for in vitro as well as in vivo studies. Therefore, different chemoselective reactions and semi-synthetic techniques such as native chemical ligation or intein-mediated protein splicing have been established. They enable a site-specific incorporation of chemical reporters into proteins, such as organic fluorophores or unnatural amino acids. In this PhD Thesis, protein trans-splicing was guided by minimal high-affinity interaction pairs to trace proteins in mammalian cells. In addition, the temporal modulation of cellular processes by photo-cleavable viral immune evasins was achieved.
Protein trans-splicing mediated by split inteins is a powerful technique for site-specific and 'traceless' protein modifications. Despite recent developments there is still an urgent need for ultra-small high-affinity intein tags for in vitro and in vivo approaches. So far, only a very few in-cell applications of protein trans-splicing are reported, all limited to C-terminal protein modifications. Here, a strategy for covalent N-terminal intein-mediated protein labeling at sub-nanomolar probe concentrations was developed. Combined with the minimalistic Ni-trisNTA/His-tag interaction pair, the affinity between the intein fragments was increased 50-fold (KD ~ 10 nM). Site-specific and efficient 'traceless' protein modification by high-affinity trans-splicing is demonstrated at nanomolar concentrations in mammalian cells.
High background originating from non-reacted, 'always-on' fluorescent probes still is a crucial issue in life sciences. Covalent labeling approaches with simultaneous activation of fluorescence are advantageous to increase sensitivity and to reduce background signal. Therefore, high-affinity protein trans-splicing was combined with fluorophore/quencher pairs for online detection of covalent N-terminal protein labeling in cellular environments. Substantial fluorescence enhancement at nanomolar probe concentrations was achieved. This ultra-small fluorogenic high-affinity split intein system is an unprecedented example for real-time monitoring of the trans-splicing reaction in cell-like environments as well as for protein labeling with fluorogenic probes at nanomolar concentrations.
To extend the field of chemical immunology and to address spatiotemporal aspects in adaptive immune response, new tools to control antigen processing are required. Therefore, synthetic photo-conditional viral immune evasins were designed to modulate antigen processing on demand. By using light, the time and dose controlled antigen translocation by the transporter associated with antigen processing (TAP) was triggered with response in the second regime. Peptide delivery and loading by the peptide-loading complex (PLC) was rendered inactive, whereas blocking was abolished in a light-controlled fashion to inactivate the synthetic viral immune evasin ICP47 along with simultaneous activation of the antigen presentation pathway. Lightresponsive peptide translocation by the TAP complex was assayed in vitro by utilizing microsomes isolated from professional antigen presenting B-cell lymphomas (Raji). To extend these studies, suppression and photo-controlled rescue of antigen presentation was examined at single-cell resolution in human primary immune cells.
Native chemical ligation interconnects peptide chemistry with recombinantly expressed proteins. This technique was applied to generate the semi-synthetic full-length ICP47. Although this approach was realized, the low product yield was not sufficient for further functional studies. Therefore, full-length ICP47 was consecutively generated by utilizing a full synthetic four-fragment ligation approach. However, this synthetic viral immune evasin was not able to block peptide translocation in a robust way.
Die vorliegende Arbeit hat das Ziel, Plasmen koaxialer Beschleuniger in Hinblick auf die Erzeugung hoher Elektronendichten sowie als intensive UV/VUV-Backlighterquelle zu untersuchen. Hierzu wurde zunächst die Geometrie eines einzelnen Beschleunigers charakterisiert und optimiert, um die bestmöglichen Voraussetzungen für die anschließend durchgeführten Untersuchungen zur Kollision und Kompression der erzeugten Plasmen zu schaffen.
Das Funktionsprinzip des verwendeten Plasmabeschleunigers basiert auf einer Lorentzkraft, die aus dem Stromfluss zwischen zwei koaxial angeordneten Elektroden und dem damit verbundenen Magnetfeld resultiert. Da weder Stromdichte noch Magnetfeld homogen sind, wirkt auch die Lorentzkraft inhomogen auf die Plasmaschicht. Unter Einbeziehung von Simulationen wurde der Abstand zwischen den Elektroden auf 2,5 mm gesetzt, sodass die Ausprägung dieser Inhomogenität möglichst gering gehalten wird. Um ein Pinchen des Plasmas am Ende der Elektroden zu vermeiden haben die Elektroden im Gegensatz zu Plasma Focus Devices die gleiche Länge. Der mit 130 nH niederinduktive elektrische Aufbau ermöglicht die zur Ausbildung einer Plasmaschicht erforderlichen Stromanstiegsraten in der Größenordnung von 10^11 A/s.
Die Messung der Geschwindigkeit der Plasmaschicht erfolgte mit einem Array aus sechs Dioden, die gleichzeitig die Geschwindigkeitsabnahme im Rezipienten dokumentieren. Zusätzlich wurden die Messungen mit Kameraaufnahmen verglichen. Bei einer Elektrodenlänge von 100 mm konnten mit dem verwendeten Heliumgas Schichtgeschwindigkeiten von bis zu (79,49 ± 7,98) km/s erreicht werden. Die Untersuchung von Elektroden mit 200 mm Länge verfolgte das Ziel, durch die größere Beschleunigungszeit höhere Geschwindigkeiten und kinetische Energien der austretenden Plasmaschicht zu erreichen. Es zeigte sich jedoch, dass es hierbei zur Ausbildung einer zweiten Entladung und einer damit verbundenen Abbremsung des Initialplasmas kommt. Die Untersuchungen ergaben, dass die optimale Elektrodenlänge dadurch gegeben ist, dass der Austritt des Plasmas aus dem Beschleuniger zum Zeitpunkt des ersten Stromnulldurchgangs erfolgt. Für die Berechnung der optimalen Elektrodenlänge wurde ein Skalierungsgesetz gefunden, die auf experimentellen Ergebnissen und Simulationen basiert.
Mit spektroskopische Messungen der Stark-Verbreiterung der Hβ-Linie konnte die Elektronendichte des Plasmas zeit- und ortsintegriert bestimmt werden. Die hierbei erzielte Maximaldichte von (6,83 ± 0,83) · 10^15 cm^-3 wurde bei 9 kV und 70 mbar gemessen. Die nach der Boltzmann-Methode zeit- und ortsintegriert bestimmten Elektronentemperaturen bewegt sich bei etwa 1 eV.
Nach ausreichender Charakterisierung des Einzelbeschleunigers wurde das Experiment um einen zweiten, baugleichen Plasmabeschleuniger erweitert, um die planare Kollision zweier Plasmen zu untersuchen. Die maximal gemessene Elektronendichte von n max e = (1,36 ± 0,21) · 10^16 cm^-3 bei 9 kV und 70 mbar stellt im Vergleich zum Einzelplasma eine Steigerung um einen Faktor von 2,48 dar und ist mit einer Temperaturerhöhung einhergehend. Diese Elektronendichteerhöhung lässt sich nicht durch einfaches Durchdringen der Schichten erklären. Vielmehr muss es in der Kollisionszone zu Wechselwirkungsprozesse in Form von Kompression, zur Erzeugung neuer Ladungsträger oder der Kombination aus beidem kommen.
Das Spektrum im UV/VUV-Bereich weist Linien von ab 85 nm auf. Dies stellt eine Verbesserung gegenüber dem Einzelbeschleuniger dar, bei dem die hochenergetischste Spektrallinie erst bei 97 nm gemessen wurde. In der Kollisionskonfiguration mit einem Beschleunigerabstand von 30 mm steigt die integrierte Gesamtintensität des Spektrums bis 300 nm zudem um einen Faktor von etwa 5,2.
Als Alternative zur Plasmakollision wurde die Kompression des Plasmas des Einzelbeschleunigers durch unterschiedliche Trichtergeometrien untersucht. Die untersuchten Trichter der ersten und zweiten Generation unterscheiden sich im Wesentlichen im Durchmesser der kleineren Öffnung. Dieser wurde basierend auf Simulationen von 5 mm auf 0,5 mm reduziert. Die Dichtediagnostik der ersten Trichtergeneration erfolgte hierbei über Hα-Linie, da die Verbreiterung der Hβ-Linie zu stark und daher nicht mehr anwendbar war. Die Auswertung der Halbwertsbreiten der Hα-Linie führt zu Elektronendichten in der Größenordnung von bis zu 1018 cm−3 bei Spannungen von 9 kV. Diese Steigerung um 1,5 bis 2,5 Größenordnungen im Vergleich zum Einzelbeschleuniger ist deutlich höher als das Verhältnis der Flächen des initialen Plasmas bzw. dem Ende des Trichters von etwa acht.
Der Trichter mit verringerter Öffnung wurde bei 5 kV und 5 mbar vermessen, um die mechanische Belastung durch den hohen Druck gering zu halten. Die Bestimmung der Elektronendichte erfolgte durch die Verbreiterung der Kupferlinie bei 479,4 nm nach den quadratischen Stark-Effekt. Trotz der im Vergleich zur ersten Trichtergeneration reduzierten Entladungsenergie und verringertem Druck sind die gemessenen Elektronendichten ebenfalls bei bis zu 10^18 cm^-3.
Durch die Kompression des Plasmas weist das Spektrum im UV/VUV-Bereich bereits Linien ab Wellenlängen etwa 53 nm auf, wobei es unter Berücksichtigung der Transmissionsgrenze von Helium bei 50 nm denkbar ist, dass das Plasma noch niedrigere Wellenlängen emittiert.
Aufgrund der gesammelten Ergebnisse lässt sich festhalten, dass sich die Elektronendichte sowohl durch die Kollision zweier Plasmen als auch durch die Kompression in Trichtergeometrien steigern lässt. Der Verdichtungseffekt der Trichterkompression ist hierbei um ein vielfaches höher, als bei der Plasmakollision. Dies spiegelt sich auch im UV/VUV-Spektrum wider. Beide Versuchsanordnungen eignen sich als Linienstrahler, allerdings weist das Spektrum der Trichterkompression Linien deutlich höherer Anregungszustände auf.
Indian Ocean came into existence with the breakup of Gondwana in the Mesozoic era. The presence of complex aseismic ridges and plateaus in the Indian Ocean makes it the least-understood of all the oceans. Mascarene Plateau, apart from Central Indian Ridge (CIR) running north-south between 2◦N and 25◦S in the Indian Ocean, is one such complex feature in the Indian Ocean that consists of Seychelles microcontinent in the north and the volcanic islands of Mauritius, La Réunion and Rodrigues in the south.
Most of the previous seismological studies on the islands of Mauritius, Rodrigues and Seychelles are restricted as each of them has only one operational permanent station. In the current study, I present the results obtained from the investigations of the seismological data obtained from the deployment of temporary seismic network on Mauritius (November, 2012–August, 2014) and Seychelles (March, 2013–March, 2015) under Réunion Hotspot and Upper Mantle–Réunions Unterer Mantel (RHUM–RUM) project and later in Rodrigues (September, 2014–June, 2016) under a collaborative project between Goethe-Universität, Frankfurt, Germany and Mauritius Oceanography Institute (MOI), Mauritius. Additional data from the permanent stations were also used in this study. The investigations and results are presented under three themes, namely: (1) crustal structure beneath Mauritius, (2) upper mantle anisotropy below Mauritius, Rodrigues and Seychelles and (3) intraplate seismicity in the Rodrigues–CIR region.
Upper mantle anisotropy in south-west Indian Ocean region are very limited, especially from the islands of Mauritius and Rodrigues. With the new data from the seismic stations deployed in Mauritius and Seychelles, under RHUM–RUM, and permanent stations in Rodrigues, I constrain the upper mantle flow pattern beneath these islands. From the joint-splitting analysis, I obtain fast-polarisation direction (φ) dominant in N80◦E and delay time (δt) of ≈0.85 s for Mauritius and φ tending east–west in Rodrigues with δt of ≈1.1 s. Parabolic asthenospheric flow model explains the orientation of the fast-polarisation direction beneath Mauritius, whereas deep mantle circulation patterns best explain the horizontal alignment of the fast-polarisation direction in Rodrigues. From Seychelles data, the results show φ trending NE and δt ≈0.74 s, even for the island close to Amirante Ridge, suggesting an asthenospheric deformation induced by relative motion between the plate and the deep mantle flow.
It has recently been suggested that the volcanic island of Mauritius may be underlain by a remnant of continental origin termed “Mauritia.” To constrain the crustal thickness beneathMauritius, I analysed data from 11 land stations, 10 of which were deployed recently under the RHUM–RUM project. From the recordings, I obtained 382 P-receiver functions. On the obtained receiver functions, I applied the H–κ stacking technique and derived the crustal thickness of ≈10–15 km. I observe a considerable variation in the VP/VS ratio caused by a lack of clear multiples. Using forward modelling of receiver functions, I show that the lack of clear multiples can be explained by a transitional Moho, where the velocity increases gradually. The modelling further indicates that the thickness of this gradient zone is estimated to be ≈10 km. I argue that my findings suggest oceanic crust thickened by crustal underplating due to the mantle plume currently located beneath La Réunion.
Seismicity around Rodrigues Island is generally associated with events recorded by the global networks along the CIR. Using seismological array techniques on the data collected by the temporary deployment of seismic array on Rodrigues Island for a period of 22 months (September, 2014–June 2016), 62 new events were located, which were not reported by any global network. Determination of backazimuth and apparent velocity were performed by applying array methods in the time-domain instead of the more conventional frequency-domain analysis. Event distances were calculated using a 1-D velocity model and the measured travel-time differences between S- and P-wave arrivals. Local magnitudes of the events were obtained by removing the velocity response from the seismographs and then convolving with Wood–Anderson transfer function to obtain ground motion in nanometers. Most of the newly-detected events are located off the ridge axis and can be classified as intraplate events. Three different seismic clusters were observed around the island. Most of the events were localised in the north-east of Rodrigues at a distance of ≈138 km from the reference station. A distinguishable swarm of earthquakes was observed on the west of the spreading segment from March to April 2015. The local magnitudes (ML) of the events varied between 1.6 and 3.7.
Steilhänge der Mittelgebirge weisen eine kleinräumige standörtliche Vielfalt auf und wurden aufgrund ihrer exponierten Lage bereits frühzeitig durch den Menschen u. a. als Befestigungsanlage genutzt. Daraus resultierte häufig eine hohe floristische und vegetationskundliche Diversität mit hohem Naturschutzwert. Durch Umwelt- und Nutzungsveränderungen hat sich aber auch an diesen Standorten in den letzten Jahrzehnten ein starker Wandel vollzogen. Durch Auswertung alter Florenlisten und Vegetationsaufnahmen und durch aktuelle Erhebungen wollen wir die Vegetationszusammensetzung der Lengder Burg, eines Steilhangs auf Unterem Muschelkalk im südlichen Göttinger Wald (Süd-Niedersachsen, Deutschland), und ihre Veränderung aufzeigen und Rückschlüsse für die zukünftige Behandlung ziehen. Dazu wurden Angaben zur Gefäßpflanzenflora aus dem Zeitraum 1950 bis 1995 mit einer aktuellen floristischen Kartierung des Gesamtgebiets von 2016 verglichen. Die Vegetationszusammensetzung wurde anhand von 37 Vegetationsaufnahmen aus dem früheren Zeitraum harakterisiert. 29 dieser Flächen wurden 2009 bis 2016 erneut aufgenommen. Räumliche und zeitliche Unterschiede in der Diversität und Artenzusammensetzung wurden hinsichtlich verschiedener standörtlicher Parameter und ökologischer Artengruppen analysiert.
Die Vegetation lässt sich zwei Gruppen zuordnen: 1. Das Carici-Fagetum und seine Kontaktgesellschaften an südlich und westlich exponierten Steilhängen. 2. Das Hordelymo-Fagetum mit verschiedenen Ausbildungen auf dem Plateau und an flacheren Süd- und Nordhangbereichen. Im Carici-Fagetum ist ein deutlicher Diversitätsverlust und eine Zunahme in der Dominanzstruktur der Krautschicht zu erkennen, der im Vergleich der Aufnahmezeiträume auf eine zunehmende Homogenisierung der Vegetation hinweist. Zurückgegangen sind dabei besonders die typischen Kenn- und Trennarten dieser Waldgesellschaft bei gleichzeitiger Zunahme der Buche in der Verjüngung. Im Hordelymo-Fagetum bewirkt neben Gehölzen in der Strauch- und Krautschicht vor allem die Zunahme von Allium ursinum eine homogenere Artenzusammensetzung, jedoch ohne Diversitätsverlust. Neben Stickstoffeinträgen, dem Klimawandel sowie einem reduzierten Rehwild-Verbiss bedingt besonders der Nutzungswandel diese Veränderungen. Vor allem im Carici-Fagetum wirkte sich der Übergang zwischen früherer Nieder- und Mittelwald-Nutzung mit Waldweide über eine fast 100jährige Hochwald-Nutzung bis zum jetzigen Schutzwald stark aus. Gleichwohl weisen die steilen Hänge weiterhin einen hohen Anteil an Rote-Liste-Arten auf und tragen wesentlich zur hohen Biodiversität des Gebiets bei. Veränderungen in der Vegetation der Lengder Burg spiegeln die Veränderungen im Göttinger Wald insgesamt wider. Kleinflächige Offenhaltungsmaßnahmen zur Erhaltung wertvoller floristischer Elemente sind teilweise erfolgreich. Kleinwüchsige, lichtbedürftige Magerkeitszeiger verschwinden jedoch zunehmend aus den sich entwickelnden, hochwüchsigen Stauden-Säumen. In den benachbarten, unbewirtschafteten Hangbuchenwäldern sorgt die fehlende Nutzung nach Jahrhunderten der Auflichtung und Aushagerung für eine Sukzession in Richtung mesophilen Kalkbuchenwalds.
In Borstgrasrasen (Nardetalia) des Werra-Meißner-Gebietes (Nordhessen, Südniedersachsen) wurden 2012 nach 25 Jahren auf möglichst gleichen Untersuchungsflächen (quasi-Dauerflächen) Wiederholungsaufnahmen angefertigt, um den gegenwärtigen Zustand bzw. Veränderungen in diesem prioritären FFH-Lebensraumtyp zu erfassen. Es wurden insgesamt 61 Flächen untersucht. Neben der Artenzusammensetzung wurden auch Bodenparameter (pH, C/N-Verhältnis, Mächtigkeit der organischen Auflage) und die Nutzung erfasst.
Bei der Wiederholungsaufnahme 2012 waren, abgesehen von einer Aufforstungsfläche, noch auf allen Flächen Arten der Borstgrasrasen vorhanden. Die Flächen wurden 2012 überwiegend genutzt oder gepflegt, während 1986/87 Brachflächen noch bei weitem dominierten. Eine Düngung der Flächen erfolgte nicht. Trotz dieser generell günstigen Nutzungssituation lässt sich ein genereller Trend zur Eutrophierung feststellen, der sich hinsichtlich Artenzahl und Deckung in einer Zunahme von Arten des Wirtschaftsgrünlandes (Molinio-Arrhenatheretea) bei gleichzeitiger Abnahme der Borstgrasrasen-Kennarten äußert. Auch die Artenzahlen der übrigen Magerkeitszeiger nahmen im Mittel ab, während Verbrachungszeiger im Allgemeinen zunahmen. Eine Veränderung der Gesamtartenzahl war nicht festzustellen. Die mittleren Zeigerwerte spiegeln die Verschiebungen im Arteninventar durch erhöhte mittlere Reaktions- und Stickstoffzahlen wider. Strukturell hat in den vergangenen 25 Jahren vor allem eine generelle Zunahme der Moosschichtdeckung und eine Ausbreitung der Sträucher auf Brachflächen stattgefunden. Bei den Bodenparametern waren 2012 eine signifikante Erhöhung der pH-Werte, eine Einengung der C/N-Verhältnisse und eine Abnahme der Mächtigkeit der organischen Auflage (Of) feststellbar. Regressionsmodelle zeigen, dass dabei die Zunahme von Arten des Wirtschaftsgrünlandes direkt mit den ansteigenden pH-Werten zusammen hing, während die Veränderungen bei den Kennarten eher vom Ausgangs-C/N-Verhältnis, teilweise auch von der Entwicklung der organischen Auflage und der Nutzung abhängig waren. Die vorgefundenen Veränderungen werden vor dem Hintergrund möglicher Gefährdungsszenarien (Brache, Eutrophierung, Bodenversauerung, Klimawandel) diskutiert. Angesichts des unerwarteten Befundes einer Eutrophierung bei gleichzeitig nachlassender Bodenversauerung, wird die Hypothese aufgestellt, dass der seit den 1990er-Jahren erfolgte Rückgang der Schwefeldepositionen mit nachfolgender Erholung der Boden-pH-Werte und nachlassender Stressbelastung, z. B. durch Ammonium-Toxizität, die Veränderungen ausgelöst haben könnte. Außerdem deuten die Ergebnisse auf eine zumindest teilweise zu geringe Nutzungs- bzw. Pflegeintensität bzw. zu späte Nutzungstermine. Möglicherweise führt der erhöhte Eutrophierungsdruck hier auch zu verstärkten Anforderungen an das Management der Flächen. Eindeutige Indizien für klimabedingte Veränderungen im Arteninventar ließen sich nicht finden. Indirekte Effekte über eine erwärmungsbedingte Förderung der Mineralisationsraten oder ein ursächlicher Zusammenhang zwischen höheren Wintertemperaturen und der Zunahme der Moosdeckung lassen sich jedoch nicht ausschließen.
Transitional between the Pannonian Basin and the Eastern Carpathians the Transcarpathian Ukraine (Transcarpathia) has a diverse geology including Quaternary sediments, volcanites, limestones and flysch, and its climate at low altitudes is relatively warm and humid. We conducted a field survey in June 2016 focusing on mesophilous forest vegetation along a transect covering almost the whole lowaltitudinal part of Transcarpathia. We recorded 54 relevés in the field and further digitized 22 relevés from literature. Using classification analysis, we distinguished three clusters of oak-hornbeam forests (alliance Carpinion betuli; 1–3) and three clusters of scree and ravine forests (alliance Tilio platyphylli-Acerion; 4–6): (1) Slightly wet Pannonian oak-hornbeam forests occurring in the lowland part of the region (Circaeo-Carpinetum); (2) Mesophilous oak-hornbeam forests (Carici pilosae-Carpinetum); (3) Xero-mesophilous oak-hornbeam forests (a drier subtype of the Carici pilosae-Carpinetum and the association Primulo veris-Carpinetum); (4) Mesophilous scree forests (Phyllitido-Aceretum); (5) Forests of steep slopes (Aceri-Tilietum) and transitions to mesophilous oak-hornbeam forests (Carici pilosae-Carpinetum); (6) Cool and wet scree and ravine forests (Arunco dioici-Aceretum pseudoplatani). Using indirect ordination analysis, three environmental variables (altitude, heat load index and slope) were identified as factors of significant influence on the species composition. These factors well distinguish oak-hornbeam forests from scree and ravine forests.
Understanding plant-plant interactions is essential in planning and implementing effective grassland management strategies. Positive and negative interactions generally co-occur in plant communities and the net effect of these interactions may depend on the disturbance regime, including grazing. Shrubs can act as biotic refuges by physically protecting neighbouring plants from herbivores. As a result, we would expect that in pastures the diversity and flowering success of plants is higher in the close vicinity of shrubs compared to the open vegetation. Nevertheless, we can also assume a competitive trade-off cost for plants that grow together with shrubs. In this study, we assessed the small-scale effects of dwarf shrubs (30–40 cm in diameter) on species density and flowering success. Specifically, we considered three types of microsites: (i) shrub interior, (ii) edge of shrub, and (iii) open pasture (more than 2 meters away from the shrub). We surveyed these three types of microsites using 10 × 10 cm sized plots both in grazed and ungrazed meadow steppe, in central Hungary. The highest species density was found at the edge of shrubs, both in grazed and ungrazed vegetation. Meanwhile, species density did not differ significantly between shrub interiors and the open pasture. However, in grazed vegetation, species flowering success was significantly higher in shrub interiors and edges than in the open pasture; no significant trend was observed for this measure in ungrazed vegetation. In contrast to previous studies, we did not detect a competitive effect of small-sized shrubs on plants in ungrazed vegetation. Our results indicate that small-sized shrubs protect other plants from herbivores and that the edge effect plays an important role for the maintenance of small-scale species diversity in pastures. Overall, our results underline the beneficial effect of biotic refuges in pastures and we suggest that retaining a sparse population of small-sized native shrubs is advantageous from a conservation point of view.
The influence of the Eastern migration route on the Slovak flora – a comparison after 40 years
(2017)
Transport is an important source of introduction and spread of alien plants into new areas and countries. This study provides comprehensive research of selected railway localities in South-Eastern Slovakia to determine the influence of the Eastern Migration Route on the Slovak flora. Railway transshipment yards in Čierna nad Tisou, Dobrá, Velké Kapušany and Matovce were studied from 1964 to 2013; with historic data sampled 1964–1998 and recent data sampled 2012–2013. These data sets were compared to determine differences in species structure following the decreased use of the transshipment yards.
A total of 657 vascular plant taxa were recorded in all localities (566 taxa in the historic and 431 taxa in the recent data set). Native species prevailed over aliens and archaeophytes over neophytes in both time periods. The most frequent aliens were naturalised taxa, where Asiatic and European species prevailed. The most frequent families were Poaceae, Asteraceae and Brassicaceae, and while many species introduced with Russian wheat were recorded only in the past, several taxa are also recorded only recently. Hemicryptophytes were the most abundant life form. Most recorded species were competitors, reproducing by seed and pollinated by insects. Zoochory and hemerochory were the most frequent dispersal types. The proportion of species traits has not changed over time. We identified 49 threatened taxa (38 in the historic and 27 in the recent data set). The Eastern migration route significantly increases the species number of alien vascular plants in the Slovak flora. Although this route had much greater importance in the past, when the role of the Eastern Slovak trans-shipment railway yards was much higher, the studied yards remain an important gateway to Eastern Central Europe and they continue to support agestochory migration of adventive plants.
Wet grasslands once covered a large area in the lowlands of northern Germany, but have declined since several decades as a result of land use intensification. Permanent plot data from such grasslands in the region that would allow to assess the extent of changes in species composition and richness are still rare. Here, we present a re-visitation study of 52 quasi-permanent plots from the Stedinger Land area in the basin of the river Weser near Bremen, comparing quadrat data between 1948 and 2015. In 1948, the grasslands were characterized by species typical of wet, moderately fertile grasslands belonging to the Bromo-Senecionetum aquatici (Bromion racemosi), including 15 species currently classified as threatened. Until 2015, the vegetation had changed strongly: almost all indicators of wet grasslands had either declined or completely vanished, whereas more nutrient-demanding species of less wet soils had increased, especially grasses. The cumulative number of species had declined by 50%, while mean plot species richness had decreased by 64.6%, mainly resulting from the pronounced loss of many herbs. A comparison of mean Ellenberg indicator values suggested that the plots had become drier, but also more base- and nutrient-rich, most likely triggered by the intensification of land use with drainage and fertilization as well as more frequent and earlier cutting. Our study reflects the dramatic loss of plant species diversity in wet grasslands over the past 60−70 years in areas not preserved and properly managed, and it documents the need for protecting remnants of these grasslands and for restoring wet grassland areas by re-wetting, nutrient removal and the transition to a less intensive land use.
Marginal associations, i.e. floristically impoverished associations at the margin of the distribution area of a higher syntaxon, form a problem in vegetation classification, because true character species are lacking. We propose a new approach for the classification of such marginal associations, making use of the notion of 'chorological tension zones'. In the absence of true character species, the species from other syntaxa of the same formation can be used as such. Our proposal is to use the species group from every formation-true class only once within every marginal alliance, to limit the number of possible marginal associations. This approach is illustrated in a classification of the retamoid thickets in the Netherlands. On the basis of a numerical-subjective classification of the relevant species in the scrub layer and the evaluation of relevant literature, we conclude that the broom and gorse thickets in the Netherlands can be assigned to the Cytisetea scopario-striati Rivas-Mart. 1974, which is represented by four associations, each of which is characterised by the species of other scrub classes. The Ulici europaei-Sarothamnion scoparii Doing ex Weber 1997 is represented by the Rubo plicati-Sarothamnetum scoparii Weber 1987 and the Crataego monogynae-Cytisetum scoparii R. Haveman, I. de Ronde & J.H.J. Schaminée ass. nov., the Ulici europaei-Cytision striati Rivas-Mart., Báscones, Díaz, Fern. Gonz. & Loidi 1991 by the Frangulo alni-Ulicetum europaei De Foucault 1988 and the Rubo ulmifolii-Ulicetum europaei J.-M. Géhu ex R. Haveman, I. de Ronde & J.H.J. Schaminée ass. nov. This classification is based on a restricted dataset though, and a revision, based on a larger dataset from a wider region has to prove the tenability of the classification.
Extensively managed pastures harbour rare and endangered species and have a decisive role in maintaining grassland biodiversity. Traditional herding of local robust cattle breeds is considered as a feasible tool for preserving these habitats. We studied the scale-dependent effects of grazing on the species richness and composition of three dry grassland types in the Great Hungarian Plain: Achilleo setaceae-Festucetum pseudovinae and Artemisio santonici-Festucetum pseudovinae alkaline grasslands, and Potentillo arenariae-Festucetum pseudovinae sand grassland. We asked the following questions: (1) Does extensive grazing have a scale-dependent effect on plant species richness of alkaline and sand grasslands? (2) How does grazing affect the proportion of specialists, generalists and weeds in the three grassland types? We sampled ten sites of each grassland type, including five extensively grazed and five non-grazed sites (altogether we had 30 sites). We used a series of nested plots each consisting of 10 plots from the size of 0.01 m² to 16 m². We revealed that grazing has contrasting effects in the three grassland types, and had a considerable effect on their species richness even at small scales. In both alkaline grassland types, total species richness was overall higher in grazed plots but it increased in a similar manner for both ungrazed and grazed habitats across plot sizes. Small-scale heterogeneity likely due to the uneven distribution of grazing, trampling and defecation together with mitigated rate of competition allowed more species to co-exist even at small scales in grazed alkaline grasslands. Grazing increased the richness of specialists, but likely due to the salt stress, establishment of weeds was hampered. Open gaps formed by trampling likely supported the establishment of several specialist species such as Plantago tenuiflora and Puccinellia limosa which are typical to open alkali grasslands. Contrary, in sand grasslands, we did not detect any effect of grazing on total species richness, likely due to the adverse effect of grazing on the species richness of specialists and weeds. In contrast with the former findings we detected significantly higher species richness in 0.01 m² and 0.0625 m² plots in the grazed sand grasslands, but found no differences at larger scales. Whilst species richness of specialists was significantly decreased, richness of weeds was increased by grazing. Decrease in the specialist species richness was likely due to the lack of their evolutionary adaptation to grazing. Degradation caused by grazing and trampling together with the propagule pressure from the neighbouring anthropogenic habitats resulted in an increased richness of weeds in the grazed sites.
The vast majority of European grasslands strongly depend on the regular removal of aboveground biomass by agricultural land use, mostly grazing or mowing or a combination of both. These specific management schemes have strong influence on plant diversity and vegetation composition, depending on their particular characteristics and their intensity. For example, the presence or absence of fertilization will favour some species over others, changing plant communities accordingly. Additionally, the farmer’s choice of a specific management scheme will also depend on the abiotic site conditions. This leads to a complex set of associated factors potentially affecting the structure and diversity of grasslands.
In this study, we compiled a unique dataset of 169 differently managed grasslands (in total 202 plots), which were sampled in five regions across Germany. For each plot, we documented management characteristics, measured plant diversity and functional group composition, recorded endangered species according to red lists, and calculated Ellenberg indicator values. We assessed patterns in vegetation composition and diversity in relation to the particular management scheme, which was categorized as meadow, meadow with autumn or winter grazing (with mowing as predominant management), mown pasture (where mowing and grazing are used at roughly equal intensity), seasonal pasture (with grazing as predominant management) and year-round pasture.
Our study showed that grasslands of different management schemes significantly differed in diversity, structure and functional composition. However, it also became obvious that vegetation composition was not strictly distinguished by management alone. Local and regional characteristics such as soil conditions, size of the grassland species pool or land-use history, often played a more prominent role than land use alone. Assumingly, the interplay of those local and regional characteristics with the proportion of grazing and mowing at a particular site inhibit clear differences among our predefined management schemes. Nevertheless, species richness was the lowest in year-round pastures, moderate in meadows and highest in seasonal pastures. In contrast, year-round pastures harboured the highest mean numbers of endangered species. The dependency of a certain management scheme on site-specific environmental factors such as soil fertility, further complicated the clear separation of management effects from those of the environmental background. In summary, modern grassland management strongly shaped grassland vegetation, but today’s combination of different management practices complicated the assessment of specific land-use effects on plant diversity. Thus, neither mowing nor grazing turned out to be “the one and only” management for nature conservation. Although our results challenge long-term prognoses for future vegetation development under modern grassland management, we clearly showed that low-intensity management and the absence of fertilization promoted plant diversity, with higher values in pastures compared to meadows and mown pastures.
Die in Amerika heimische Kolumbianische Zwergwasserlinse (Wolffia columbiana) tritt neuerdings in Europa als Neophyt auf und konnte in Niedersachsen zum ersten Mal im Jahr 2016 nachgewiesen werden. Im Hintergrund stehen die für den Naturschutz relevanten Fragen, wie viele vermeintliche Vorkommen von Wolffia arrhiza in Wirklichkeit Wolffia columbiana repräsentieren und ob dieser Neophyt die heimische und gefährdete Art Wolffia arrhiza verdrängen kann.
Die Floristisch-soziologische Arbeitsgemeinschaft wurde am 13. August 1927 in Göttingen gegründet und besteht nun, mit einer Unterbrechung zwischen 1941 und 1948, seit 90 Jahren. In diesem Rückblick wird vor allem die Entwicklung nach dem 2. Weltkrieg näher dargestellt. Hauptkapitel sind Verein, Satzung und Vorstände, Mitgliederentwicklung, Jahrestagungen, Arbeitskurse und Workshops, die Publikation der Mitteilungen und von Tuexenia mit ihren Beiheften sowie der Synopsis der Pflanzengesellschaften Deutschlands. Insgesamt wird eine sehr erfolgreiche Entwicklung mit Konstanz wesentlicher, schon zu Beginn formulierter Ziele und dynamischen Anpassungen an neue Gegebenheiten festgestellt.
GrassVeg.DE – die neue kollaborative Vegetationsdatenbank für alle Offenlandhabitate Deutschlands
(2017)
Der Bericht stellt die neue kollaborative Vegetationsdatenbank GrassVeg.DE (EU-DE-020; http://bit.ly/2qgX208) vor, die Vegetationsaufnahmen von Grasländern und anderen nicht-aquatischen Offenlandhabitaten Deutschlands sammelt, um sie national und international für die vegetationsökologische Forschung zur Verfügung zu stellen. GrassVeg.DE trägt die Daten zum European Vegetation Archive (EVA) und künftig auch zur globalen Vegetationsdatenbank „sPlot“ bei. Datenlieferanten von GrassVeg.DE behalten volle Verfügungsgewalt über ihre Daten und werden Mitglied des GrassVeg.DE-Konsortiums. Dadurch profitieren sie durch Co-Autorenschaften und Zitate von ihren Beiträgen und erlangen zugleich die Möglichkeit, selbst Projekte zu beantragen, die GrassVeg.DE- oder EVA-Daten nutzen. Die schnell wachsende GrassVeg.DE-Datenbank umfasste im Juli 2017 3.181 Vegetationsaufnahmen aus acht deutschen Bundesländern. Perspektivisch kann GrassVeg.DE dazu beitragen, eine konsistente Neuklassifikation der Graslandvegetationstypen Deutschlands im Rahmen der Synopsis der Pflanzengesellschaften Deutschlands zu ermöglichen. Wir schließen den Beitrag mit einem Aufruf, eigene und aus der Literatur digitalisierte Vegetationsaufnahmen zu GrassVeg.DE beizutragen.
Seit 12 Jahren werden von Mitgliedern der Eurasian Dry Grassland Group (EDGG) und deren Vorgängerorganisationen Grasland-Sonderteile in Tuexenia herausgegeben. Der diesjährige Sonderteil enthält fünf Artikel, die das Grasland verschiedener mitteleuropäischer Länder mit unterschiedlichen Zielen untersuchen. Der erste Artikel untersucht Auswirkungen von Weide und Mahd auf die Diversität des Graslands in Deutschland in Abhängigkeit von verschiedenen Umweltfaktoren, der zweite die Auswirkung kleiner Büsche auf den Artenreichtum von Gefäßpflanzen in beweideten Wiesensteppen in Ungarn. Der dritte Artikel fragt, ob sich ungarische Sandtrockenrasen mit Festuca vaginata von solchen mit F. pseudovaginata in ihrer Vegetation und ihren Standortsbedingungen unterscheiden; die letztere war erst kürzlich beschrieben worden. Der vierte Artikel modelliert Auswirkungen des Klimawandels auf geschützte Graslandbestände in Serbien und deren Arten während schließlich der fünfte Artikel die Initiative einer neuen Datenbank des deutschen Graslands (GrassVeg.DE) vorstellt und dazu aufruft, sich daran zu beteiligen. Insgesamt haben zu diesem 12. Grasland-Sonderteil 41 Autoren aus fünf Ländern (Dänemark, Deutschland, Italien, Schweiz, Serbien und Ungarn) beigetragen.