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Human Transformer2-beta (hTra2-beta) is an important member of the serine/arginine-rich protein family, and contains one RNA recognition motif (RRM). It controls the alternative splicing of several pre-mRNAs, including those of the calcitonin/calcitonin gene-related peptide (CGRP), the survival motor neuron 1 (SMN1) protein and the tau protein. Accordingly, the RRM of hTra2-beta specifically binds to two types of RNA sequences [the CAA and (GAA)2 sequences]. We determined the solution structure of the hTra2-beta RRM (spanning residues Asn110–Thr201), which not only has a canonical RRM fold, but also an unusual alignment of the aromatic amino acids on the beta-sheet surface. We then solved the complex structure of the hTra2-beta RRM with the (GAA)2 sequence, and found that the AGAA tetra-nucleotide was specifically recognized through hydrogen-bond formation with several amino acids on the N- and C-terminal extensions, as well as stacking interactions mediated by the unusually aligned aromatic rings on the beta-sheet surface. Further NMR experiments revealed that the hTra2-beta RRM recognizes the CAA sequence when it is integrated in the stem-loop structure. This study indicates that the hTra2-beta RRM recognizes two types of RNA sequences in different RNA binding modes.
Gradation and intensification can be subject to different linguistic procedures. The present paper focuses on aspects of intensification and gradation by means of word formation in adjectives. The argument is that German and Romanian, as languages belonging to different language families, operate with different means to express high intensity in adjectives. The critical analysis on dictionary items (German-Romanian) aims at disclosing how mental representations are being formally structured at language level. It argues that correct equivalence in translation work can be achieved only if the deep structure level is properly understood by the translator.
Studying the role of human parietal cortex in visuospatial attention with concurrent TMS-fMRI
(2010)
Combining transcranial magnetic stimulation (TMS) with concurrent functional magnetic resonance imaging (fMRI) allows study of how local brain stimulation may causally affect activity in remote brain regions. Here, we applied bursts of high- or low-intensity TMS over right posterior parietal cortex, during a task requiring sustained covert visuospatial attention to either the left or right hemifield, or in a neutral control condition, while recording blood oxygenation-level–dependent signal with a posterior MR surface coil. As expected, the active attention conditions activated components of the well-described “attention network,” as compared with the neutral baseline. Also as expected, when comparing left minus right attention, or vice versa, contralateral occipital visual cortex was activated. The critical new finding was that the impact of high- minus low-intensity parietal TMS upon these visual regions depended on the currently attended side. High- minus low-intensity parietal TMS increased the difference between contralateral versus ipsilateral attention in right extrastriate visual cortex. A related albeit less pronounced pattern was found for left extrastriate visual cortex. Our results confirm that right human parietal cortex can exert attention-dependent influences on occipital visual cortex and provide a proof of concept for the use of concurrent TMS–fMRI in studying how remote influences can vary in a purely top–down manner with attentional demands. Key words: concurrent TMS--fMRI, posterior parietal cortex, statedependence, visuospatial attention
Kurzfassung der Dissertation an der Carl von Ossietzky-Universität Oldenburg, Mathematisch-Naturwissenschaftliche Fakultät (2009), angefertigt im Museum für Naturkunde Berlin in Zusammenarbeit mit dem Institut für Vogelforschung "Vogelwarte Helgoland", betreut von Prof. Dr. Franz Bairlein und Dr. Sylke Frahnert
At the edge of the Harz Mountains in Lower Saxony a population of the hart's tongue fern (Asplenium scolopendrium) threatened by destruction by a gypsum quarry were transplanted into a dolina which was not populated by the species at that time, and the new population was followed over ten years. 90% of the 59 transplanted plants survived this period and grew larger during the first six years after transplantation. Progenies appeared in the third year after transplantation. Nowadays, in the tenth year after transplantation, there are 1110 progenies, 171 of which are reproducing. Overall, the population increased by 1781% in the ten years. Plants that were planted on a rocky slope or a boulder heap in the new habitat, where soil was available, grew better than plants in rock faces without soil. In contrast, in the rock faces, where substrate was not covered with autumn foliage, more juveniles established. The distance between juveniles and mother plants rarely exceeded three meters, which indicates a limited dispersal potential of the hart’s tongue fern and may explain together with low diaspore pressure as a result of local rarity of the species that the dolina had not been colonized spontaneously. We conclude that transplantations of adult plants or introduction of spores are a suitable measure for preserving hart’s tongue fern populations that are endangered by destruction. In the long run, however, such measures cannot compensate for ongoing destruction of natural habitats by mining activities in the gypsum karst region at the southern edge of the Harz Mountains.
Sucrose- and H+-dependent charge movements associated with the gating of sucrose transporter ZmSUT1
(2010)
Background: In contrast to man the majority of higher plants use sucrose as mobile carbohydrate. Accordingly proton-driven sucrose transporters are crucial for cell-to-cell and long-distance distribution within the plant body. Generally very negative plant membrane potentials and the ability to accumulate sucrose quantities of more than 1 M document that plants must have evolved transporters with unique structural and functional features.
Methodology/Principal Findings: To unravel the functional properties of one specific high capacity plasma membrane sucrose transporter in detail, we expressed the sucrose/H+ co-transporter from maize ZmSUT1 in Xenopus oocytes. Application of sucrose in an acidic pH environment elicited inward proton currents. Interestingly the sucrose-dependent H+ transport was associated with a decrease in membrane capacitance (Cm). In addition to sucrose Cm was modulated by the membrane potential and external protons. In order to explore the molecular mechanism underlying these Cm changes, presteady-state currents (Ipre) of ZmSUT1 transport were analyzed. Decay of Ipre could be best fitted by double exponentials. When plotted against the voltage the charge Q, associated to Ipre, was dependent on sucrose and protons. The mathematical derivative of the charge Q versus voltage was well in line with the observed Cm changes. Based on these parameters a turnover rate of 500 molecules sucrose/s was calculated. In contrast to gating currents of voltage dependent-potassium channels the analysis of ZmSUT1-derived presteady-state currents in the absence of sucrose (I = Q/τ) was sufficient to predict ZmSUT1 transport-associated currents.
Conclusions: Taken together our results indicate that in the absence of sucrose, ‘trapped’ protons move back and forth between an outer and an inner site within the transmembrane domains of ZmSUT1. This movement of protons in the electric field of the membrane gives rise to the presteady-state currents and in turn to Cm changes. Upon application of external sucrose, protons can pass the membrane turning presteady-state into transport currents.
Der typische Sukzessionsverlauf auf basenreichen offenen Sandstandorten im Binnenland führt von Pionierstadien der Koelerio-Corynephoretea zu artenreichen Allio-Stipetum-Beständen (Festuco-Brometea). Innerhalb weniger Jahre können sich aber auch artenarme Dominanzbestände mit hohem Ruderalisierungsgrad entwickeln, die durch generalistische konkurrenzstarke Graminoide bestimmt werden. 32 Dauerbeobachtungsflächen, die ohne Pflegemanagement sind und mittlerweile seit bis zu 15 Jahren von uns untersucht werden, ermöglichen einen detaillierten Blick auf die unterschiedlichen Sukzessionslinien und die Geschwindigkeiten, mit denen sich Änderungen in der Artenzusammensetzung vollziehen. Dabei stehen uns neben den Daten der Vegetationsaufnahmen und den daraus abgeleiteten Informationen (wie z. B. mittleren Ellenberg-Zeigerwerten) für verschiedene Flächen auch Boden-Daten (N, P, pH) zur Verfügung. Eine Analyse aller Flächen dokumentiert die relative Stabilität offener Sandvegetation nährstoffarmer Standorte für die untersuchten Zeitfenster. Pioniergesellschaften des Sileno conicae-Cerastietum semidecandri s. l. und Jurineo-Koelerietum glaucae zeigen z. T. strukturelle Änderungen (so z. B. Zunahmen der Kryptogamendeckung). Eine Zunahme von Stipa capillata kann z. T. in 11–12 Untersuchungsjahren im Jurineo-Koelerietum festgestellt werden; dies korrespondiert mit einer Abnahme von Koeleria glauca und z. T. mit einer Ablösung von Tortula ruraliformis durch Hypnum cupressiforme var. lacunosum. Dennoch konnten sich während der Untersuchungsjahre in den Beständen die Arten des Jurineo-Koelerietum halten. Bestände des Allio-Stipetum zeigen in der spontanen Sukzession z. T. lange Stagnationen von mehr als 14 Jahren; vereinzelt tritt der Polykormonbildner Prunus spinosa auf. Stellenweise kommt es mit zunehmender Deckung von Stipa capillata jedoch zu gravierenden Abnahmen der Artenzahl. Bestände, die in ihrer Pionierphase durch höhere Bodennährstoffgehalte (besonders Phosphat) und höhere Ellenberg-Feuchtezahlen gekennzeichnet sind, entwickeln sich innerhalb weniger Jahre zu artenarmen Ruderalbeständen. Die gewonnenen Ergebnisse werden in einem Sukzessionsmodell dargestellt. Für ein Pflegemanagement ergibt sich aus den Ergebnissen, dass intakte Koelerion glaucae-Flächen oft nur sehr extensiv beweidet werden müssen. Insbesondere zur Dämpfung der Ruderalisierung in den nährstoffreicheren Flächen sowie zur Dynamisierung in größeren homogenen Beständen des Allio-Stipetum ist ein Pflegemanagement jedoch eine essentielle Maßnahme. Die in unseren Fällen eingesetzte Schaf- und/oder Eselbeweidung führt zur partiellen Förderung der besonders gefährdeten Pionierstadien im Mosaik mit dem Allio-Stipetum.
Inclusive transverse momentum spectra of primary charged particles in Pb–Pb collisions at √sNN=2.76 TeV have been measured by the ALICE Collaboration at the LHC. The data are presented for central and peripheral collisions, corresponding to 0–5% and 70–80% of the hadronic Pb–Pb cross section. The measured charged particle spectra in |η|<0.8 and 0.3<pT<20 GeV/c are compared to the expectation in pp collisions at the same sNN, scaled by the number of underlying nucleon–nucleon collisions. The comparison is expressed in terms of the nuclear modification factor RAA. The result indicates only weak medium effects (RAA≈0.7) in peripheral collisions. In central collisions, RAA reaches a minimum of about 0.14 at pT=6–7 GeV/c and increases significantly at larger pT. The measured suppression of high-pT particles is stronger than that observed at lower collision energies, indicating that a very dense medium is formed in central Pb–Pb collisions at the LHC.
Although a variety of genetic strategies have been developed to inhibit HIV replication, few direct comparisons of the efficacy of these inhibitors have been carried out. Moreover, most studies have not examined whether genetic inhibitors are able to induce a survival advantage that results in an expansion of genetically-modified cells following HIV infection. We evaluated the efficacy of three leading genetic strategies to inhibit HIV replication: 1) an HIV-1 tat/rev-specific small hairpin (sh) RNA; 2) an RNA antisense gene specific for the HIV-1 envelope; and 3) a viral entry inhibitor, maC46. In stably transduced cell lines selected such that >95% of cells expressed the genetic inhibitor, the RNA antisense envelope and viral entry inhibitor maC46 provided the strongest inhibition of HIV-1 replication. However, when mixed populations of transduced and untransduced cells were challenged with HIV-1, the maC46 fusion inhibitor resulted in highly efficient positive selection of transduced cells, an effect that was evident even in mixed populations containing as few as 1% maC46-expressing cells. The selective advantage of the maC46 fusion inhibitor was also observed in HIV-1-infected cultures of primary T lymphocytes as well as in HIV-1-infected humanized mice. These results demonstrate robust inhibition of HIV replication with the fusion inhibitor maC46 and the antisense Env inhibitor, and importantly, a survival advantage of cells expressing the maC46 fusion inhibitor both in vitro and in vivo. Evaluation of the ability of genetic inhibitors of HIV-1 replication to confer a survival advantage on genetically-modified cells provides unique information not provided by standard techniques that may be important in the in vivo efficacy of these genes.