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Extracting thermodynamic properties from van 't Hoff plots with emphasis on temperature-sensing ion channels

  • Transient receptor potential (TRP) ion channels are among the most well-studied classes of temperature-sensing molecules. Yet, the molecular mechanism and thermodynamic basis for the temperature sensitivity of TRP channels remains to this day poorly understood. One hypothesis is that the temperature-sensing mechanism can simply be described by a difference in heat capacity between the closed and open channel states. While such a two-state model may be simplistic it nonetheless has descriptive value, in the sense that it can be used to to compare overall temperature sensitivity between different channels and mutants. Here, we introduce a mathematical framework based on the two-state model to reliably extract temperature-dependent thermodynamic potentials and heat capacities from measurements of equilibrium constants at different temperatures. Our framework is implemented in an open-source data analysis package that provides a straightforward way to fit both linear and nonlinear van ‘t Hoff plots, thus avoiding some of the previous, potentially erroneous, assumptions when extracting thermodynamic variables from TRP channel electrophysiology data.

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Metadaten
Author:Jakob Tómas BullerjahnORCiDGND, Sonya M. HansonORCiD
URN:urn:nbn:de:hebis:30:3-742929
DOI:https://doi.org/10.1101/2023.06.02.543442
Parent Title (English):bioRxiv
Document Type:Preprint
Language:English
Date of Publication (online):2023/06/03
Date of first Publication:2023/06/03
Publishing Institution:Universitätsbibliothek Johann Christian Senckenberg
Release Date:2023/06/13
Issue:2023.06.02.543442
Page Number:8
HeBIS-PPN:509396089
Institutes:Physik
Dewey Decimal Classification:5 Naturwissenschaften und Mathematik / 53 Physik / 530 Physik
Sammlungen:Universitätspublikationen
Licence (German):License LogoCreative Commons - CC BY-NC - Namensnennung - Nicht kommerziell 4.0 International