Transcriptomics of a KDELR1 knockout cell line reveals modulated cell adhesion properties

  • KDEL receptors (KDELRs) represent transmembrane proteins of the secretory pathway which regulate the retention of soluble ER-residents as well as retrograde and anterograde vesicle trafficking. In addition, KDELRs are involved in the regulation of cellular stress response and ECM degradation. For a deeper insight into KDELR1 specific functions, we characterised a KDELR1-KO cell line (HAP1) through whole transcriptome analysis by comparing KDELR1-KO cells with its respective HAP1 wild-type. Our data indicate more than 300 significantly and differentially expressed genes whose gene products are mainly involved in developmental processes such as cell adhesion and ECM composition, pointing out to severe cellular disorders due to a loss of KDELR1. Impaired adhesion capacity of KDELR1-KO cells was further demonstrated through in vitro adhesion assays, while collagen- and/or laminin-coating nearly doubled the adhesion property of KDELR1-KO cells compared to wild-type, confirming a transcriptional adaptation to improve or restore the cellular adhesion capability. Perturbations within the secretory pathway were verified by an increased secretion of ER-resident PDI and decreased cell viability under ER stress conditions, suggesting KDELR1-KO cells to be severely impaired in maintaining cellular homeostasis.

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Author:Andrea Blum, Saleem Khalifa, Karl NordströmORCiD, Martin SimonORCiDGND, Marcel Holger SchulzORCiDGND, Manfred J. Schmit
URN:urn:nbn:de:hebis:30:3-564628
DOI:https://doi.org/10.1038/s41598-019-47027-5
ISSN:2045-2322
Pubmed Id:https://pubmed.ncbi.nlm.nih.gov/31337861
Parent Title (English):Scientific reports
Publisher:[London]
Place of publication:Macmillan Publishers Limited, part of Springer Nature
Document Type:Article
Language:English
Date of Publication (online):2019/07/23
Date of first Publication:2019/07/23
Publishing Institution:Universitätsbibliothek Johann Christian Senckenberg
Release Date:2020/11/04
Volume:9
Issue:10611
Page Number:8
HeBIS-PPN:474012085
Institutes:Medizin / Medizin
Dewey Decimal Classification:6 Technik, Medizin, angewandte Wissenschaften / 61 Medizin und Gesundheit / 610 Medizin und Gesundheit
Sammlungen:Universitätspublikationen
Licence (German):License LogoCreative Commons - Namensnennung 4.0