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Buch des Monats August 2024
(2024)
Experimental data from the NA49 collaboration show an unexpectedly steep rise of the rapidity width of the ϕ meson as function of beam energy, which was suggested as possible interesting signal for novel physics. In this work we show that the Ultra-relativistic Quantum-Molecular-Dynamics (UrQMD) model is able to reproduce the shapes of the rapidity distributions of most measured hadrons and predicts a common linear increase of the width for all hadrons. Only when following the exact same analysis technique and experimental acceptance of the NA49 and NA61/SHINE collaborations, we find that the extracted value of the rapidity width of the ϕ increases drastically for the highest beam energy. We conclude that the observed steep increase of the ϕ rapidity width is a problem of limited detector acceptance and the simplified Gaussian fit approximation.
Autophagy is an important degradation pathway mediating the engulfment of cellular material (cargo) into autophagosomes followed by degradation in autophagosomes.
Different stress stimuli, e.g. nutrient deprivation, oxidative stress or organelle damage, engage autophagy to maintain cellular homeostasis, recycle nutrients or remove damaged cell organelles. Autophagy not only degrades bulk cytoplasmic material but also selective autophagic cargo, for example lysosomes (lysophagy), mitochondria (mitophagy), ER (ER-phagy), lipid droplets (lipophagy), protein aggregates (aggrephagy) or pathogens (xenophagy). Selective autophagy pathways are regulated by selective autophagy receptors which bind to ubiquitinated cargo proteins and link them to LC3 on the autophagosomal membrane.
Ubiquitination is an essential post-translational modification controlling different cellular processes such as proteasomal and lysosomal degradation or innate immune signaling.
M1-linked (linear) poly-Ubiquitin (poly-Ub) chains are exclusively assembled by the E3 ligase linear ubiquitin chain assembly complex (LUBAC) and removed by the M1 poly-Ub-specific OTU domain-containing deubiquitinase with linear linkage specificity (OTULIN). In addition to key functions in innate immune signaling and nuclear factor-κB (NF-κB) activation, M1 ubiquitination is also implicated in the regulation of autophagy.
LUBAC and OTULIN control autophagy initiation and maturation and the autophagic clearance of invading bacteria via xenophagy. However, additional functions of LUBAC- and OTULIN-regulated M1 ubiquitination in autophagy are largely unknown and it also remains unexplored if LUBAC and OTULIN control other selective autophagy pathways in addition to xenophagy. This study aimed to unravel the role of LUBAC- and OTULIN-controlled M1 ubiquitination in bulk and selective autophagy in more detail.
In this study, characterization of OTULIN-depleted MZ-54 glioblastoma (GBM) cells revealed that OTULIN deficiency results in enhanced LC3 lipidation in response to autophagy induction and upon blockade of late stage autophagy with Bafilomycin A1 (BafA1). Furthermore, electron microscopy analysis showed that OTULIN-deficient cells have an increased number of degradative compartments (DGCs), confirming enhanced autophagy activity upon loss of OTULIN. APEX2-based autophagosome content profiling identified various OTULIN-dependent autophagy cargo proteins. Among these were the autophagy receptor TAX1BP1 which regulates different forms of selective autophagy (e.g. lysophagy, aggrephagy) and the glycan-binding protein galectin-3 which serves key functions in lysophagy, suggesting a role of OTULIN and M1 poly-Ub in the regulation of aggrephagy and lysophagy.
Abstract 2
To study aggrephagy, protein aggregation was induced with puromycin which causes premature termination of translation and accumulation of defective ribosomal products (DRiPs). Loss of OTULIN increased the number of M1 poly-Ub-positive foci and insoluble proteins and reduced the levels of soluble TAX1BP1 and p62 in response to puromycin-induced proteotoxic stress.
Intriguingly, upon induction of lysosomal membrane permeabilization (LMP) with the lysosomotropic drug L-Leucyl-L-Leucine methyl ester (LLOMe), M1 poly-Ub strongly accumulated at damaged lysosomes and colocalized with TAX1BP1- and galectin-3-positive puncta. M1 poly-Ub-modified lysosomes formed a platform for NF-κB essential modulator (NEMO) and inhibitor of κB (IκB) kinase (IKK) complex recruitment and local NF-κB activation in a K63 poly-Ub- and OTULIN-dependent manner. Furthermore, inhibition of lysosomal degradation enhanced LLOMe-induced cell death, suggesting pro-survival functions of lysophagy following LMP. Enrichment of M1 poly-Ub at damaged lysosomes was also observed in human dopaminergic neurons and in primary mouse embryonic cortical neurons, confirming the importance of M1 poly-Ub in the response to lysosomal damage.
Together, these results identify OTULIN as a negative regulator of autophagy induction and the autophagic flux and reveal OTULIN-dependent autophagy cargo proteins.
Furthermore, this study uncovers novel and important roles of M1 poly-Ub in the response to lysosomal damage and local NF-κB activation at damaged lysosomes.
In der Welt der wilden Kerle : eine populäre Serie im Zeichen des russisch-ukrainischen Krieges
(2024)
Zum Jahreswechsel 2023/2024 gelang einer russischen Fernsehserie, was während Russlands Krieg gegen die Ukraine eigentlich unvorstellbar scheint: Innerhalb weniger Tage entwickelte sich "Ehrenwort eines Kerls. Blut auf dem Asphalt" ("Slowo pazana. Krow na asfalte", 2023) beiderseits der Schützengräben zur populärsten Serie des Jahres. Die Zuschauer- und Klickzahlen erreichten Rekordhöhen und der Titelsong "Pyjala" (dt. 'Glas') der tatarischen Band Aigel schaffte es an die Spitze diverser Hitparaden in beiden Ländern. In der Russischen Föderation war die Serie zwar mit der Altersgrenze "18+" versehen und nur bei den privaten Streamingdiensten Wink und START zu sehen. Doch schon während der Ausstrahlung der acht Folgen der ersten Staffel vom 9. November bis 21. Dezember 2023 verbreitete die Serie sich blitzschnell über Telegram und andere digitale Kanäle. Sätze wie "Kerle entschuldigen sich nicht" oder "Denk dran, du bist jetzt ein Kerl, du bist jetzt auf der Straße, und ringsherum sind Feinde" wurden zu geflügelten Worten. Pädagogen und Politikerinnen schlugen Alarm, als in der Presse Berichte auftauchten, die von durch die Serie inspirierten Schlägereien berichteten, und zwar sowohl in Russland als auch in der Ukraine. Bevor die letzten Folgen überhaupt ausgestrahlt worden waren, gab es auf "Ehrenwort eines Kerls" bereits in beiden Ländern ein breites Medienecho, wobei die Kritiken kontrovers ausfielen und von enthusiastischer Begeisterung bis zu hellem Entsetzen und kategorischer Ablehnung reichten. In der Ukraine kreiste die Diskussion vor allem um die Frage, ob die Fernsehserie allein schon deshalb gefährliche Kriegspropaganda sei, weil sie aus dem Feindesland kommt. In Russland erregte die vermeintliche Romantisierung der Verbrecherwelt Anstoß. Manche Kritiker deuteten die Serie aber auch als subversiven Zerrspiegel der militärischen Aggression. Was war das aber für ein populärkulturelles Werk, das für so viel Aufmerksamkeit und Aufregung sorgte?
Als Carlo Ginzburg die These formulierte, dass die Geisteswissenschaften wie die Kriminalliteratur im sog. "Indizienparadigma" gründeten, hatte er mit Sherlock Holmes einen Detektiv vor Augen, der persönlich den Tatort besichtigte. Dort erhob er Spuren, kombinierte sie und kam in oftmals ingeniösen, aber auch höchst spekulativen Schlussfolgerungen zur Lösung seines Falls. Vor dem Hintergrund aktueller Entwicklungen in Forschung und Fahndung muss dieses materiell und empirisch grundierte "Indizienparadigma" jedoch einer Revision unterzogen werden. Denn seit der Privatdetektiv von "Kommissar Computer" Konkurrenz bekommen hat, haben sich die Investigationspraktiken grundlegend gewandelt: So können computergestützte Fahndungs- und Aufklärungsmethoden eine Besichtigung des Tatorts ersetzen, während algorithmische Wahrscheinlichkeitsrechnung vergangene wie zukünftige Fälle erhellt. Der vorliegende Sammelband mit Beiträgen aus der Literatur-, Medien- und Designwissenschaft untersucht, inwiefern solche "virtuellen Investigationen" in Literatur und Kunst der Gegenwart eine Revision des Indizienparadigmas einschließen - und inwiefern Begriffe der Virtualität bereits die Investigativarbeit im 19. Jahrhundert prägten
Jet-hadron correlations with respect to the event plane in √sNN = 200 GeV Au+Au collisions in STAR
(2024)
Angular distributions of charged particles relative to jet axes are studied in sNN−−−√ = 200 GeV Au+Au collisions as a function of the jet orientation with respect to the event plane. This differential study tests the expected path-length dependence of energy loss experienced by a hard-scattered parton as it traverses the hot and dense medium formed in heavy-ion collisions. A second-order event plane is used in the analysis as an experimental estimate of the reaction plane formed by the collision impact parameter and the beam direction. Charged-particle jets with 15<pT,jet< 20 and 20<pT,jet< 40 GeV/c were reconstructed with the anti-kT algorithm with radius parameter setting of (R=0.4) in the 20-50\% centrality bin to maximize the initial-state eccentricity of the interaction region. The reaction plane fit method is implemented to remove the flow-modulated background with better precision than prior methods. Yields and widths of jet-associated charged-hadron distributions are extracted in three angular bins between the jet axis and the event plane. The event-plane (EP) dependence is further quantified by ratios of the associated yields in different EP bins. No dependence on orientation of the jet axis with respect to the event plane is seen within the uncertainties in the kinematic regime studied. This finding is consistent with a similar experimental observation by ALICE in sNN−−−√ = 2.76 TeV Pb+Pb collision data.
Die dritte universitätsweite Studierendenbefragung fand zwischen Ende November 2022 und Ende Januar 2023 statt und setzte damit den fünfjährigen Turnus der Befragung fort (Wintersemester 2012/13, Wintersemester 2017/18). Im vorliegenden Bericht werden die Informationen des Basisbogens der Studierendenbefragung 2023 dargestellt, wobei vornehmlich einzelne (univariate) Fragestellungen deskriptiv betrachtet und die Ergebnisse als Grafiken und/oder Tabellen dargestellt werden.
A taxonomic study on the Afrotropical genera Afrepipona Giordani Soika, 1965 and Afrepsilon gen. nov. is presented. Twenty new species are described, of which 15 are in Afrepipona (Afrepipona anomala sp. nov., Afrepipona cellularis sp. nov., Afrepipona clonata sp. nov., Afrepipona cuprea sp. nov., Afrepipona lamellata sp. nov., Afrepipona lamptula sp. nov., Afrepipona lobulata sp. nov., Afrepipona meridionalis sp. nov., Afrepipona occidentalis sp. nov., Afrepipona orientalis sp. nov., Afrepipona punctatissima sp. nov., Afrepipona scabra sp. nov., Afrepipona segregata sp. nov., Afrepipona ulterior sp. nov., Afrepipona vulcanica sp. nov.) and five are in Afrepsilon (Afrepsilon aterrimum gen. et sp. nov., Afrepsilon ferrugineoaureum gen. et sp. nov., Afrepsilon hybridum gen. et sp. nov., Afrepsilon minor gen. et sp. nov., and Afrepsilon pictum gen. et sp. nov.). Afrepipona lamptoensis Giordani Soika, 1965 is withdrawn from synonymy with A. angusta (de Saussure, 1863) and subsequently revalidated. Afrepipona unifasciata Gusenleitner, 2012 is transferred to the genus Antodynerus de Saussure, 1855 (Antodynerus unifasciatus comb. nov.). Keys to all known species are provided.
Species lists play an important role in biology and practical domains like conservation, legislation, biosecurity and trade regulation. However, their effective use by non-specialist scientific and societal users is sometimes hindered by disagreements between competing lists. While it is well-known that such disagreements exist, it remains unclear how prevalent they are, what their nature is, and what causes them. In this study, we argue that these questions should be investigated using methods based on taxon concept rather than methods based on Linnaean names, and use such a concept-based method to quantify disagreement about bird classification and investigate its relation to research effort. We found that there was disagreement about 38% of all groups of birds recognized as a species, more than three times as much as indicated by previous measures. Disagreement about the delimitation of bird groups was the most common kind of conflict, outnumbering disagreement about nomenclature and disagreement about rank. While high levels of conflict about rank were associated with lower levels of research effort, this was not the case for conflict about the delimitation of bird groups. This suggests that taxonomic disagreement cannot be resolved simply by increasing research effort.
In this study, we describe two new species of Mesobiotus based on morphological data collected through light and scanning electron microscopy. Descriptions include DNA sequences of four commonly used molecular markers (18S rDNA, 28S rDNA, ITS-2, and COI). Mesobiotus efa sp. nov. was discovered in North-West Russia and belongs to the group of species with smooth cuticle, harmsworthi-type OCA, typical Mesobiotus claws IV with unindented lunules, and egg chorion with reticulated processes in form of ‘sharp wide cones’ or ‘cones with long slender endings’, egg process bases with well-developed crone of dark thickenings without finger-like projections, and egg shell surface between the processes with ridges without reticulation, areolation or semi-areolation. It can be distinguished from all know species of this group by a unique combination of morphological and morphometric characters. Mesobiotus vulpinus sp. nov. was found in the Russian Far East, and is similar to Mesobiotus mauccii by having an egg chorion with polygonal relief. The new species can be distinguished from M. mauccii by having a narrower buccal tube, by details of oral cavity armature, and by longer egg chorion processes. Furthermore, we provide results of the phylogenetic analyses of the genus Mesobiotus conducted in this study.
A comprehensive checklist and host plants of Aphididae (Aphidomorpha: Hemiptera) from Pakistan
(2024)
The family Aphididae (Hemiptera) represents one of the most diverse groups of sap-sucking insect pests referred to as aphids or plant-lice, with 366 species reported in Pakistan, associated with wide array of agricultural and horticultural crops, including fruit and forest trees, weeds, grasses, shrubs, and vines. This work aims to provide an updated checklist of aphids and their associated host plants documented across various regions of Pakistan. The checklist consolidates information from various published literature sources, including annotated checklists, regional distribution data, and host plant records from Pakistan. In this study, we present an annotated checklist of 366 aphid species, belonging to 134 genera and 11 subfamilies, associated with a total of 359 host plant species stretched over 84 families in Pakistan.
Although semi-aquatic cockroaches have been known for a long time, these insects remain little studied and their diversity underestimated. While a few species are known from Asia or South America, only a single one is known to be associated with water in Africa. Here, we report two species of semi-aquatic cockroaches of the subfamily Epilamprinae from Cameroon. One of these species is new: Rhabdoblatta fotoi Nyame Mbia, Legendre & Biram à Ngon sp. nov. Africalolampra camerunensis (Borg, 1902) comb. nov. was also found associated to these streams and we provide an extended description of this species, as well as for Africalolampra stipata comb. nov., also known from streams in West Africa. Another species was found in Cameroonian streams and is described here, although only identified at the family level (Blattellidae). The descriptions are based on morpho-anatomic characters, including male genitalia. Because nymphs were found primarily associated with water – more than adults – we provide a description of nymphs whenever possible. We provide molecular data (12S rRNA marker) for two of these water-associated species that we compared with published and unpublished sequences of Epilamprinae in a Maximum Likelihood approach. We also illustrate all but one species from continental Africa in the genera Africalolampra and Rhabdoblatta, including R. punctipennis (Saussure, 1895) which we reinstate. We provide a map and list of localities for Africalolampra and Rhabdoblatta spp. from continental Africa and Madagascar, as well as an identification key for species of Africalolampra. We finally discuss putative adaptations of semi-aquatic cockroaches.
Ophioderma teres (Lyman, 1860), an ophiuroid previously believed to have a wide distribution in the eastern Pacific, has been found to have an unclear taxonomic identity. While considered a well-known species, recent studies have revealed that O. teres lacks a holotype and has vague boundaries with its congeners Ophioderma teres unicolor H.L. Clark, 1940 and Ophioderma sodipallaresi Caso, 1986, as well as with two additional new morphotypes detected in Mexico and Nicaragua, causing continuous misidentifications. This study utilized an integrative taxonomy approach based on morphologic, morphometric, and molecular evidence to clarify the taxonomic status of O. teres, O. sodipallaresi, O. teres unicolor, and the two new morphotypes. Data integration led to the following results: 1) the neotype designation and redescription of O. teres; 2) the proposal of O. sodipallaresi as a junior synonym of O. teres; 3) the status change of O. unicolor stat. nov. from subspecies to species, and 4) the description of the morphotypes as the new species Ophioderma aija sp. nov. and Ophioderma bichi sp. nov. An identification key to the eastern Pacific species of Ophioderma was also developed. This work contributes to the knowledge of Ophioderma in the region, increasing the number of described species and providing resources for their accurate identification.
The monophyly of Theraphosinae is supported by both morphological and molecular phylogenies. However, intergeneric relationships often show polytomies and branches with low support. A previous phylogenetic study proposed an intergeneric relationship for the subfamily based on molecular data and divided it into three tribes: Grammostolini, Hapalopini and Theraphosini. However, not all genera of Theraphosinae were sampled, and some relationships were inferred based on morphological similarities. Regarding the Hapalopini from Brazil, the relationships of some genera are still uncertain, such as Kochiana, Catanduba, and Munduruku. In this paper, we describe four new species of Hapalopini from Brazil: Cyriocosmus paresi sp. nov., Hapalopus akroa sp. nov., H. guidonae sp. nov., and K. fukushimae sp. nov. In addition, we propose an updated diagnosis for these three genera and for the species K. brunnipes and M. bicoloratum.
Scalibregmatidae Malmgren, 1867 is a family of annelids, with only few taxa reported from Brazil. In this work, we describe two new species of Asclerocheilus Ashworth, 1901. The new species A. geiseae sp. nov. and A. blakei sp. nov. were collected during scientific expeditions to the Espírito Santo and Campos sedementary basins. These expeditions were coordinated by PETROBRAS/CENPES. The species A. geiseae sp. nov. is unique among its congeners by the presence of acicular spines with rounded and curved tips in two rows. The second species, A. blakei sp. nov., differs from its congeners by the combination of the presence of a trapezoidal prostomium, acicular spines on chaetigers 1–3, lyrate chaetae from chaetiger 3 on notopodia and 2 on neuropodia. Moreover, we report the species A. tropicus Blake, 1981 from the localities sampled on this study. We also provide an identification key to all species of Asclerocheilus of the world.
Description of four new species of the Neotropical genus Scione Walker, 1850 (Diptera: Tabanidae)
(2024)
After 94 years after the last revision of the genus and after 22 years since the last species was named, we describe four new species of Scione from Ecuador and Peru: S. cooperi sp. nov., S. gertrudeae sp. nov., S. kroeberi sp. nov. and S. merianae sp. nov. We provide diagnoses, descriptions, photographs and discussions for each of the species.
Five new species of the spider genus Heteropoda Latreille, 1804 (Araneae: Sparassidae) from China
(2024)
Five new species of Heteropoda (Araneae, Sparassidae, Heteropodinae) are described from China: H. bawanglingensis sp. nov. (female; Hainan), H. dulongensis sp. nov. (male, female; Yunnan), H. hainanensis sp. nov. (male, female; Hainan), H. longa sp. nov. (female; Guizhou), and H. vaginalis sp. nov. (female; Yunnan). We provide descriptions and illustrations for each species as well as a distribution map in the current paper.
Sipunculans are a poorly studied group in the Tropical Eastern Pacific. For the Southern Mexican Pacific (SMP) there is only one record of a sipunculan species. The main objective of this work was to determine the species composition of the phylum Sipuncula present in the SMP. The study area covered three Mexican states: Guerrero, Oaxaca and Chiapas; specimens from 28 localities were examined from both intertidal and subtidal zones. A total of 551 specimens were reviewed, from which 11 species were identified. Five of them have previously been recorded in the Tropical Eastern Pacific (TEP): Apionsoma (A.) hespera comb. nov., A. (Edmondsius) pectinatum, Aspidosiphon (A.) elegans, Phascolosoma (P.) puntarenae and Themiste (T.) hennahi; four species are similar to nominal species: Sipunculus (S.) cf. polymyotus, Siphonosoma cf. vastum, Siphonosoma cf. cumanense and Phascolosoma (P.) cf. perlucens; and two new species are described: Aspidosiphon (Paraspidosiphon) cutleri sp. nov. and Aspidosiphon (Paraspidosiphon) pastori sp. nov. A checklist and an identification key for all sipunculan species from the TEP are presented. The checklist includes 53 taxa, 25 of which are questionable records. This work generated 11 new records of sipunculans in the SMP and five new records in the TEP.